RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Gm35339A0A140LHH9 1649 aa32.34■■■□□ 2.77
Trim50-201ENSMUST00000065785 NischQ80TM9 1593 aa32.03■■■□□ 2.72
Trim50-201ENSMUST00000065785 Abcc9P70170 1546 aa31.14■■■□□ 2.58
Trim50-201ENSMUST00000065785 Abcc8B2RUS7 1588 aa30.85■■■□□ 2.53
Trim50-201ENSMUST00000065785 ScribQ80U72 1612 aa29.52■■■□□ 2.32
Trim50-201ENSMUST00000065785 Rhox8Q6VSS7 320 aa29■■■□□ 2.23
Trim50-201ENSMUST00000065785 Rtl1Q7M732 1744 aa28.67■■■□□ 2.18
Trim50-201ENSMUST00000065785 Dcaf1Q80TR8 1506 aa28.62■■■□□ 2.17
Trim50-201ENSMUST00000065785 Kdm5dQ62240 1548 aa28.6■■■□□ 2.17
Trim50-201ENSMUST00000065785 NacadQ5SWP3 1504 aa28.58■■■□□ 2.17
Trim50-201ENSMUST00000065785 Sycp2Q9CUU3 1500 aa28.01■■■□□ 2.08
Trim50-201ENSMUST00000065785 Rb1cc1Q9ESK9 1588 aa28■■■□□ 2.07
Trim50-201ENSMUST00000065785 Ccdc180J3QNE4 1664 aa27.99■■■□□ 2.07
Trim50-201ENSMUST00000065785 Baz1aO88379 1555 aa27.74■■■□□ 2.03
Trim50-201ENSMUST00000065785 Zcchc6Q5BLK4 1491 aaKnown RBP27.65■■■□□ 2.02
Trim50-201ENSMUST00000065785 BicraF8VPZ9 1578 aa27.59■■■□□ 2.01
Trim50-201ENSMUST00000065785 Crybg2B7ZCC2 1516 aa27.47■■□□□ 1.99
Trim50-201ENSMUST00000065785 Smarca2Q6DIC0 1577 aa27.08■■□□□ 1.93
Trim50-201ENSMUST00000065785 Ccdc136Q3TVA9 1136 aa26.9■■□□□ 1.9
Trim50-201ENSMUST00000065785 HrcG5E8J6 738 aa26.74■■□□□ 1.87
Trim50-201ENSMUST00000065785 Pds5bQ4VA53 1446 aaKnown RBP26.64■■□□□ 1.85
Trim50-201ENSMUST00000065785 Trim41Q5NCC3 630 aa26.63■■□□□ 1.85
Trim50-201ENSMUST00000065785 Cecr2E9Q2Z1 1453 aa26.55■■□□□ 1.84
Trim50-201ENSMUST00000065785 Atad2bE9Q166 1460 aaKnown RBP26.51■■□□□ 1.83
Trim50-201ENSMUST00000065785 Smarca4Q3TKT4 1613 aaKnown RBP26.49■■□□□ 1.83
Trim50-201ENSMUST00000065785 Brd4Q9ESU6 1400 aaKnown RBP26.41■■□□□ 1.82
Trim50-201ENSMUST00000065785 Thoc2B1AZI6 1594 aaKnown RBP26.31■■□□□ 1.8
Trim50-201ENSMUST00000065785 Iqgap2Q3UQ44 1575 aa26.28■■□□□ 1.8
Trim50-201ENSMUST00000065785 Synj1Q8CHC4 1574 aa26.13■■□□□ 1.77
Trim50-201ENSMUST00000065785 Dnajc5bQ9CQ94 199 aa26.08■■□□□ 1.77
Trim50-201ENSMUST00000065785 CftrP26361 1476 aa26.07■■□□□ 1.76
Trim50-201ENSMUST00000065785 Ercc6F8VPZ5 1481 aa26.06■■□□□ 1.76
Trim50-201ENSMUST00000065785 Cep164Q5DU05 1446 aa26.04■■□□□ 1.76
Trim50-201ENSMUST00000065785 Cttnbp2B9EJA2 1648 aa26.02■■□□□ 1.76
Trim50-201ENSMUST00000065785 Wdr62Q3U3T8 1523 aa25.99■■□□□ 1.75
Trim50-201ENSMUST00000065785 Golga3P55937 1487 aa25.99■■□□□ 1.75
Trim50-201ENSMUST00000065785 Frmpd1A2AKB4 1549 aa25.95■■□□□ 1.74
Trim50-201ENSMUST00000065785 Cc2d2aQ8CFW7 1633 aa25.89■■□□□ 1.74
Trim50-201ENSMUST00000065785 Cngb1E1AZ71 1325 aa25.79■■□□□ 1.72
Trim50-201ENSMUST00000065785 Fam135aQ6NS59 1506 aa25.79■■□□□ 1.72
Trim50-201ENSMUST00000065785 Top2bQ64511 1612 aa25.77■■□□□ 1.72
Trim50-201ENSMUST00000065785 Rsf1E9PWW9 1441 aaKnown RBP25.76■■□□□ 1.71
Trim50-201ENSMUST00000065785 Unc13aQ4KUS2 1712 aa25.72■■□□□ 1.71
Trim50-201ENSMUST00000065785 Esf1Q3V1V3 845 aaKnown RBP25.65■■□□□ 1.7
Trim50-201ENSMUST00000065785 Phldb1Q6PDH0 1371 aaKnown RBP25.65■■□□□ 1.7
Trim50-201ENSMUST00000065785 Ccdc88bQ4QRL3 1481 aa25.64■■□□□ 1.69
Trim50-201ENSMUST00000065785 Chic1Q8CBW7 227 aa25.63■■□□□ 1.69
Trim50-201ENSMUST00000065785 Rpgrip1Q9EPQ2 1331 aa25.59■■□□□ 1.69
Trim50-201ENSMUST00000065785 Baz1bQ9Z277 1479 aa25.49■■□□□ 1.67
Trim50-201ENSMUST00000065785 Fmn1Q05860 1466 aa25.41■■□□□ 1.66
Trim50-201ENSMUST00000065785 Ubl4bQ9CQ84 188 aa25.35■■□□□ 1.65
Trim50-201ENSMUST00000065785 Acin1Q9JIX8 1338 aaKnown RBP25.33■■□□□ 1.65
Trim50-201ENSMUST00000065785 Top2aQ01320 1528 aaKnown RBP25.21■■□□□ 1.63
Trim50-201ENSMUST00000065785 Gab3Q8BSM5 595 aa25.21■■□□□ 1.63
Trim50-201ENSMUST00000065785 Lamc3Q9R0B6 1581 aa25.19■■□□□ 1.62
Trim50-201ENSMUST00000065785 Ehmt2Q9Z148 1263 aaKnown RBP25.16■■□□□ 1.62
Trim50-201ENSMUST00000065785 Mrc2Q64449 1479 aa25.15■■□□□ 1.62
Trim50-201ENSMUST00000065785 TnnQ80Z71 1560 aa25.13■■□□□ 1.61
Trim50-201ENSMUST00000065785 Kif15Q6P9L6 1387 aa25.11■■□□□ 1.61
Trim50-201ENSMUST00000065785 Rapgef2Q8CHG7 1496 aa25.06■■□□□ 1.6
Trim50-201ENSMUST00000065785 Cux2P70298 1426 aa25.01■■□□□ 1.59
Trim50-201ENSMUST00000065785 Cep162Q6ZQ06 1403 aa24.82■■□□□ 1.56
Trim50-201ENSMUST00000065785 Camsap1A2AHC3 1581 aa24.78■■□□□ 1.56
Trim50-201ENSMUST00000065785 Kif21aQ9QXL2 1672 aa24.78■■□□□ 1.56
Trim50-201ENSMUST00000065785 Ccdc18Q640L5 1455 aa24.75■■□□□ 1.55
Trim50-201ENSMUST00000065785 Eif4g1Q6NZJ6 1600 aaKnown RBP24.74■■□□□ 1.55
Trim50-201ENSMUST00000065785 Npm1Q61937 292 aaKnown RBP24.72■■□□□ 1.55
Trim50-201ENSMUST00000065785 NrkQ9R0G8 1455 aa24.63■■□□□ 1.53
Trim50-201ENSMUST00000065785 Lrriq1Q0P5X1 1673 aa24.62■■□□□ 1.53
Trim50-201ENSMUST00000065785 Il27Q8K3I6 234 aa24.6■■□□□ 1.53
Trim50-201ENSMUST00000065785 Npm2Q80W85 207 aa24.58■■□□□ 1.53
Trim50-201ENSMUST00000065785 LrpprcQ6PB66 1392 aaKnown RBP24.57■■□□□ 1.52
Trim50-201ENSMUST00000065785 Shroom4Q1W617 1475 aa24.54■■□□□ 1.52
Trim50-201ENSMUST00000065785 PtprkP35822 1457 aa24.52■■□□□ 1.52
Trim50-201ENSMUST00000065785 Dhx29Q6PGC1 1365 aaKnown RBP24.51■■□□□ 1.51
Trim50-201ENSMUST00000065785 Arhgap35Q91YM2 1499 aa24.5■■□□□ 1.51
Trim50-201ENSMUST00000065785 Grin2bQ01097 1482 aa24.49■■□□□ 1.51
Trim50-201ENSMUST00000065785 PogzQ8BZH4 1409 aaKnown RBP24.47■■□□□ 1.51
Trim50-201ENSMUST00000065785 Map3k1P53349 1493 aa24.45■■□□□ 1.5
Trim50-201ENSMUST00000065785 Crocc2F6XLV1 1638 aa24.45■■□□□ 1.5
Trim50-201ENSMUST00000065785 Myt1lP97500 1187 aa24.43■■□□□ 1.5
Trim50-201ENSMUST00000065785 Urb2E9Q7L1 1524 aaKnown RBP24.38■■□□□ 1.49
Trim50-201ENSMUST00000065785 Duox2A2AQ99 1517 aa24.37■■□□□ 1.49
Trim50-201ENSMUST00000065785 Plb1Q3TTY0 1478 aa24.36■■□□□ 1.49
Trim50-201ENSMUST00000065785 Clip1Q922J3 1391 aa24.32■■□□□ 1.48
Trim50-201ENSMUST00000065785 Mroh2bQ7M6Y6 1581 aa24.29■■□□□ 1.48
Trim50-201ENSMUST00000065785 Efcab5A0JP43 1406 aa24.28■■□□□ 1.48
Trim50-201ENSMUST00000065785 Mier1Q5UAK0 511 aa24.28■■□□□ 1.48
Trim50-201ENSMUST00000065785 Eif4g3Q80XI3 1579 aaKnown RBP24.26■■□□□ 1.47
Trim50-201ENSMUST00000065785 NefmP08553 848 aa24.24■■□□□ 1.47
Trim50-201ENSMUST00000065785 AqrQ8CFQ3 1481 aaKnown RBP24.23■■□□□ 1.47
Trim50-201ENSMUST00000065785 Eea1Q8BL66 1411 aa24.23■■□□□ 1.47
Trim50-201ENSMUST00000065785 Samd9lQ69Z37 1561 aa24.22■■□□□ 1.47
Trim50-201ENSMUST00000065785 Ift140E9PY46 1464 aa24.17■■□□□ 1.46
Trim50-201ENSMUST00000065785 Setd1bQ8CFT2 1985 aa24.12■■□□□ 1.45
Trim50-201ENSMUST00000065785 Arap1Q4LDD4 1452 aa24.12■■□□□ 1.45
Trim50-201ENSMUST00000065785 UbtfP25976 765 aaKnown RBP24.11■■□□□ 1.45
Trim50-201ENSMUST00000065785 Disp1Q3TDN0 1521 aa24.1■■□□□ 1.45
Trim50-201ENSMUST00000065785 Arhgef5E9Q7D5 1581 aa24.09■■□□□ 1.45
Trim50-201ENSMUST00000065785 Setd5Q5XJV7 1441 aa24.08■■□□□ 1.45
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms