RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 Stab2Q8R4U0 2559 aa13.1□□□□□ -0.31
Msx1-201ENSMUST00000063116 Fam240bJ3QMB3 78 aa13.1□□□□□ -0.31
Msx1-201ENSMUST00000063116 Insl3O09107 122 aa13.1□□□□□ -0.31
Msx1-201ENSMUST00000063116 Gm10549Q3URY4 149 aa13.1□□□□□ -0.31
Msx1-201ENSMUST00000063116 P01896 185 aa13.09□□□□□ -0.31
Msx1-201ENSMUST00000063116 SelenowP63300 88 aa13.09□□□□□ -0.31
Msx1-201ENSMUST00000063116 Cox6cQ9CPQ1 76 aa13.08□□□□□ -0.32
Msx1-201ENSMUST00000063116 Defb11Q8R2I7 77 aa13.07□□□□□ -0.32
Msx1-201ENSMUST00000063116 Cby1Q9D1C2 127 aa13.07□□□□□ -0.32
Msx1-201ENSMUST00000063116 Hrct1Q9D6B9 109 aa13.07□□□□□ -0.32
Msx1-201ENSMUST00000063116 Wdr38Q9D994 303 aa13.07□□□□□ -0.32
Msx1-201ENSMUST00000063116 Gm5617Q91VN2 117 aa13.06□□□□□ -0.32
Msx1-201ENSMUST00000063116 Dppa2Q9CWH0 301 aa13.06□□□□□ -0.32
Msx1-201ENSMUST00000063116 2310061N02RikQ9D6S9 174 aa13.06□□□□□ -0.32
Msx1-201ENSMUST00000063116 Tenm2Q9WTS5 2764 aa13.06□□□□□ -0.32
Msx1-201ENSMUST00000063116 Gm867A0A1W2P7T4 151 aa13.05□□□□□ -0.32
Msx1-201ENSMUST00000063116 Ndufa12Q7TMF3 145 aaKnown RBP13.05□□□□□ -0.32
Msx1-201ENSMUST00000063116 Ociad2Q9D8W7 154 aa13.05□□□□□ -0.32
Msx1-201ENSMUST00000063116 LbhQ9CX60 105 aa13.04□□□□□ -0.32
Msx1-201ENSMUST00000063116 Q9DAQ5 155 aa13.03□□□□□ -0.32
Msx1-201ENSMUST00000063116 Igkv8-24A0A140T8P5 121 aa13.03□□□□□ -0.32
Msx1-201ENSMUST00000063116 Gm16485Q8C4B7 115 aa13.03□□□□□ -0.32
Msx1-201ENSMUST00000063116 Lgals4Q8K419 326 aa13.03□□□□□ -0.32
Msx1-201ENSMUST00000063116 Tcl1b3P56842 122 aa13.01□□□□□ -0.33
Msx1-201ENSMUST00000063116 Tcl1b5P56845 121 aa13.01□□□□□ -0.33
Msx1-201ENSMUST00000063116 Rpl28P41105 137 aaKnown RBP13□□□□□ -0.33
Msx1-201ENSMUST00000063116 PrkdcP97313 4128 aa13□□□□□ -0.33
Msx1-201ENSMUST00000063116 Igkv1-117A0A140T8M0 119 aa13□□□□□ -0.33
Msx1-201ENSMUST00000063116 Ighv2-9A0A075B5Q5 116 aa12.98□□□□□ -0.33
Msx1-201ENSMUST00000063116 Pglyrp4Q0VB07 374 aa12.98□□□□□ -0.33
Msx1-201ENSMUST00000063116 Trav13-2A0A075B649 110 aa12.97□□□□□ -0.33
Msx1-201ENSMUST00000063116 Gm9903Q8C9Y8 129 aa12.96□□□□□ -0.33
Msx1-201ENSMUST00000063116 Fras1Q80T14 4010 aa12.96□□□□□ -0.34
Msx1-201ENSMUST00000063116 MifP34884 115 aaKnown RBP12.96□□□□□ -0.34
Msx1-201ENSMUST00000063116 FasnP19096 2504 aaKnown RBP12.95□□□□□ -0.34
Msx1-201ENSMUST00000063116 A730009L09RikA0A1B0GS82 72 aa12.95□□□□□ -0.34
Msx1-201ENSMUST00000063116 Gm17509Q9CZ61 145 aa12.94□□□□□ -0.34
Msx1-201ENSMUST00000063116 2310009B15RikA0A0A6YWI4 143 aa12.94□□□□□ -0.34
Msx1-201ENSMUST00000063116 4930556J24RikQ9D4U7 146 aa12.94□□□□□ -0.34
Msx1-201ENSMUST00000063116 Wfdc12Q9JHY3 85 aa12.94□□□□□ -0.34
Msx1-201ENSMUST00000063116 Igkv8-18A0A0B4J1J3 123 aa12.93□□□□□ -0.34
Msx1-201ENSMUST00000063116 Igkv8-16A0A0G2JDG9 121 aa12.93□□□□□ -0.34
Msx1-201ENSMUST00000063116 Cox7b2Q9D2H1 82 aa12.93□□□□□ -0.34
Msx1-201ENSMUST00000063116 Sprr4Q8CGN8 76 aa12.92□□□□□ -0.34
Msx1-201ENSMUST00000063116 Gm9507D3Z5T3 223 aa12.92□□□□□ -0.34
Msx1-201ENSMUST00000063116 Gm10518F6UQQ9 182 aa12.91□□□□□ -0.34
Msx1-201ENSMUST00000063116 Gm9918Q8BUR5 174 aa12.91□□□□□ -0.34
Msx1-201ENSMUST00000063116 MrapQ9D159 127 aa12.91□□□□□ -0.34
Msx1-201ENSMUST00000063116 Dnal4Q9DCM4 105 aa12.91□□□□□ -0.34
Msx1-201ENSMUST00000063116 PlecQ9QXS1 4691 aaKnown RBP12.9□□□□□ -0.34
Msx1-201ENSMUST00000063116 Smim26Q3V460 107 aa12.9□□□□□ -0.34
Msx1-201ENSMUST00000063116 Csdc2Q91YQ3 154 aa12.9□□□□□ -0.34
Msx1-201ENSMUST00000063116 Igkv4-92A0A0B4J1I2 117 aa12.9□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm16381A0A1Y7VKT9 73 aa12.9□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm5153P01627 120 aa12.9□□□□□ -0.35
Msx1-201ENSMUST00000063116 Defb29Q8BGW9 78 aa12.9□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm28269A0A087WSG3 125 aa12.89□□□□□ -0.35
Msx1-201ENSMUST00000063116 Ube2wQ8VDW4 151 aa12.89□□□□□ -0.35
Msx1-201ENSMUST00000063116 Defa16P50714 93 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm10845Q3UNY9 185 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 A0A286YCN5 57 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 9430015G10RikA2ASP7 199 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 Cox7bP56393 80 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 Reg3dQ9QUS9 175 aa12.88□□□□□ -0.35
Msx1-201ENSMUST00000063116 Trav3-1Q5R1I8 114 aa12.87□□□□□ -0.35
Msx1-201ENSMUST00000063116 Cox8cA6H666 72 aa12.86□□□□□ -0.35
Msx1-201ENSMUST00000063116 Sigmar1O55242 223 aa12.86□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm10767Q3TQP0 103 aa12.86□□□□□ -0.35
Msx1-201ENSMUST00000063116 P01819 144 aa12.85□□□□□ -0.35
Msx1-201ENSMUST00000063116 Gm5142Q8C5X9 133 aa12.84□□□□□ -0.35
Msx1-201ENSMUST00000063116 1700020N15RikL7MTX3 112 aa12.84□□□□□ -0.35
Msx1-201ENSMUST00000063116 Defa1P11477 93 aa12.84□□□□□ -0.35
Msx1-201ENSMUST00000063116 Camk2n2Q78WH7 79 aa12.84□□□□□ -0.35
Msx1-201ENSMUST00000063116 Ufsp1Q9CZP0 217 aa12.84□□□□□ -0.35
Msx1-201ENSMUST00000063116 Ube2d4D3YUH6 135 aa12.83□□□□□ -0.36
Msx1-201ENSMUST00000063116 Hbb-b2P02089 147 aa12.83□□□□□ -0.36
Msx1-201ENSMUST00000063116 Trav13n-2A0A0G2JF93 110 aa12.82□□□□□ -0.36
Msx1-201ENSMUST00000063116 Xlr5cQ9JJR2 179 aa12.82□□□□□ -0.36
Msx1-201ENSMUST00000063116 Igkv1-35A0A0G2JDE5 120 aa12.82□□□□□ -0.36
Msx1-201ENSMUST00000063116 Acyp1P56376 99 aa12.82□□□□□ -0.36
Msx1-201ENSMUST00000063116 4930524J08RikQ9CUJ5 163 aa12.82□□□□□ -0.36
Msx1-201ENSMUST00000063116 Dnah11E9Q7N9 4488 aa12.81□□□□□ -0.36
Msx1-201ENSMUST00000063116 Trav14-1A0A0G2JF94 121 aa12.81□□□□□ -0.36
Msx1-201ENSMUST00000063116 Sprr1aQ62266 144 aa12.81□□□□□ -0.36
Msx1-201ENSMUST00000063116 BatfO35284 125 aa12.8□□□□□ -0.36
Msx1-201ENSMUST00000063116 Cdip1Q9DB75 208 aa12.8□□□□□ -0.36
Msx1-201ENSMUST00000063116 Trav3-4A0A075B654 114 aa12.8□□□□□ -0.36
Msx1-201ENSMUST00000063116 AY074887Q8R5F9 132 aa12.8□□□□□ -0.36
Msx1-201ENSMUST00000063116 Gm17577J3QNF7 156 aa12.79□□□□□ -0.36
Msx1-201ENSMUST00000063116 TeppQ6IMH0 216 aa12.79□□□□□ -0.36
Msx1-201ENSMUST00000063116 Gm10251J3QPM5 127 aa12.78□□□□□ -0.36
Msx1-201ENSMUST00000063116 CnbpP53996 178 aaKnown RBP12.78□□□□□ -0.36
Msx1-201ENSMUST00000063116 Igkv3-12A0A140T8P0 119 aa12.78□□□□□ -0.36
Msx1-201ENSMUST00000063116 BB014433Q8C5R5 389 aa12.78□□□□□ -0.36
Msx1-201ENSMUST00000063116 BaalcQ8VHV1 145 aa12.77□□□□□ -0.37
Msx1-201ENSMUST00000063116 Dnah9B1AR51 4484 aa12.77□□□□□ -0.37
Msx1-201ENSMUST00000063116 4930519P11RikQ9CUJ8 166 aa12.76□□□□□ -0.37
Msx1-201ENSMUST00000063116 Rpl18aP62717 176 aaKnown RBP12.75□□□□□ -0.37
Msx1-201ENSMUST00000063116 Defa20Q45VN2 95 aa12.75□□□□□ -0.37
Msx1-201ENSMUST00000063116 5730596B20RikQ8BQ08 205 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 225 ms