RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Hbb-b2P02089 147 aa10.96□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Rpl39lQ9CQD0 51 aa10.96□□□□□ -0.65
Ckap4-201ENSMUST00000053871 C530025M09RikF6RGA8 229 aa10.96□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Defa16P50714 93 aa10.95□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Ighv13-2A0A0A6YWN3 119 aa10.95□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Xcl1P47993 114 aa10.95□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Igkv3-1A0A075B5P1 119 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 A0A286YCN5 57 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Krtap11-1E9Q2E9 183 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Ighv8-11A0A075B5X4 119 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Mzt1Q8BUR9 78 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Reg3dQ9QUS9 175 aa10.94□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Igkv8-18A0A0B4J1J3 123 aa10.93□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Tmem213Q08EA8 116 aa10.93□□□□□ -0.66
Ckap4-201ENSMUST00000053871 4930535I16RikQ9CUI2 172 aa10.92□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Gm867A0A1W2P7T4 151 aa10.92□□□□□ -0.66
Ckap4-201ENSMUST00000053871 E130218I03RikA0A0U1RNU5 63 aa10.9□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Smim26Q3V460 107 aa10.9□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Sprr1bQ62267 153 aa10.9□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Atp5eP56382 52 aa10.9□□□□□ -0.66
Ckap4-201ENSMUST00000053871 D130052B06RikQ3UW13 202 aa10.9□□□□□ -0.66
Ckap4-201ENSMUST00000053871 Igkv4-58A0A0G2JGI6 119 aa10.9□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Gm5153P01627 120 aa10.89□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Cmc4Q61908 68 aa10.89□□□□□ -0.67
Ckap4-201ENSMUST00000053871 PkigO70139 76 aa10.88□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Acyp1P56376 99 aa10.88□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Rpl18aP62717 176 aaKnown RBP10.88□□□□□ -0.67
Ckap4-201ENSMUST00000053871 SvipQ3UZP4 77 aa10.88□□□□□ -0.67
Ckap4-201ENSMUST00000053871 9530053A07RikE9PVG8 2581 aa10.88□□□□□ -0.67
Ckap4-201ENSMUST00000053871 1810062G17RikG3X8Y2 129 aa10.87□□□□□ -0.67
Ckap4-201ENSMUST00000053871 VwfQ8CIZ8 2813 aa10.87□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Ighv1-56A0A0A6YXG2 117 aa10.86□□□□□ -0.67
Ckap4-201ENSMUST00000053871 BB014433Q8C5R5 389 aa10.86□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Defa25Q5G864 92 aa10.86□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Igf1P05017 153 aa10.86□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Gm10320E9PW43 113 aa10.84□□□□□ -0.67
Ckap4-201ENSMUST00000053871 EnhoQ8K1D8 76 aa10.84□□□□□ -0.67
Ckap4-201ENSMUST00000053871 Ifitm6A0A1B0GS75 124 aa10.83□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Gm7137J3QMW1 236 aa10.83□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Gm10845Q3UNY9 185 aa10.83□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Igkv8-34A0A0G2JDU0 121 aa10.83□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Reg3bP35230 175 aa10.82□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Igkv1-88A0A140T8N1 120 aa10.82□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Gm9805F6YK59 57 aa10.81□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Defa2P28309 93 aa10.81□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Defa4P28311 92 aa10.81□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Fn1P11276 2477 aaKnown RBP10.8□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Ufsp1Q9CZP0 217 aa10.79□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Snhg11Q4G0K9 87 aa10.79□□□□□ -0.68
Ckap4-201ENSMUST00000053871 MplkipQ9D011 178 aa10.79□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Ighv8-13A0A075B5Y0 101 aa10.78□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Hist1h4aP62806 103 aaKnown RBP10.78□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Gm10735Q3US96 136 aa10.78□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Klk9Q32M27 251 aa10.77□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Psors1c2Q80ZC9 134 aa10.77□□□□□ -0.68
Ckap4-201ENSMUST00000053871 4930556J24RikQ9D4U7 146 aa10.77□□□□□ -0.68
Ckap4-201ENSMUST00000053871 Gm28539A0A087WSL9 92 aa10.77□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Smim20D3Z7Q2 69 aa10.77□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Gm20726G3UX18 150 aa10.77□□□□□ -0.69
Ckap4-201ENSMUST00000053871 4930519P11RikQ9CUJ8 166 aa10.76□□□□□ -0.69
Ckap4-201ENSMUST00000053871 A730009L09RikA0A1B0GS82 72 aa10.76□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Apoc4Q61268 124 aa10.76□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Cox7bP56393 80 aa10.76□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Znf414Q9DCK4 299 aa10.76□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Lamtor3O88653 124 aa10.75□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Q9DAA7 145 aa10.75□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Ube2d4D3YUH6 135 aa10.75□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Tcl1b3P56842 122 aa10.75□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Gm36176A0A1W2P8D5 158 aa10.74□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Defa7P50705 93 aa10.74□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Naa38Q9D2U5 125 aa10.74□□□□□ -0.69
Ckap4-201ENSMUST00000053871 P01819 144 aa10.73□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Gm11213A0A1B0GR83 88 aa10.73□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Defb37Q7TMD2 62 aa10.72□□□□□ -0.69
Ckap4-201ENSMUST00000053871 E130114P18RikF6S0S7 154 aa10.72□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Cox7b2Q9D2H1 82 aa10.72□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Gm17577J3QNF7 156 aa10.71□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Cystm1Q8K353 104 aa10.71□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Gm9903Q8C9Y8 129 aa10.71□□□□□ -0.69
Ckap4-201ENSMUST00000053871 Sslp1Q3UN54 99 aa10.71□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Igkv8-27A0A0G2JF28 120 aa10.7□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Igkv8-30A0A140T8M3 121 aa10.7□□□□□ -0.7
Ckap4-201ENSMUST00000053871 CnbpP53996 178 aaKnown RBP10.7□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Camk2n2Q78WH7 79 aa10.7□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Msrb1Q9JLC3 116 aa10.7□□□□□ -0.7
Ckap4-201ENSMUST00000053871 AY074887Q8R5F9 132 aa10.69□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Igkv8-26A0A075B5N5 123 aa10.69□□□□□ -0.7
Ckap4-201ENSMUST00000053871 E130208F15RikQ3UPV3 143 aa10.68□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Csdc2Q91YQ3 154 aa10.68□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Gm3618D3Z4P5 127 aa10.67□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Gm2916Q9D9B9 127 aa10.67□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Ighv10-3A0A075B5T6 119 aa10.67□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Ighv10-1A0A0B4J1J6 119 aa10.67□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Ighv2-9A0A075B5Q5 116 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Igkv1-122A0A140T8M9 119 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Phxr5P08399 672 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Fam19a1Q7TPG8 133 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Cdk2ap2Q9CPY4 127 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Gm17509Q9CZ61 145 aa10.66□□□□□ -0.7
Ckap4-201ENSMUST00000053871 Defa21Q8C1P2 93 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms