RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Lamtor3O88653 124 aa10.14□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Usp24B1AY13 2617 aaKnown RBP10.14□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Igkv1-110A0A0B4J1I0 119 aa10.14□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Ighv10-1A0A0B4J1J6 119 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Gm10518F6UQQ9 182 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Vpreb1P13372 142 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Cox7bP56393 80 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Defb26Q30KN7 186 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Trav9n-4A0A075B631 113 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 E130114P18RikF6S0S7 154 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Serp1Q9Z1W5 66 aa10.13□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Fam19a3Q7TPG6 132 aa10.12□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 4930556J24RikQ9D4U7 146 aa10.12□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Cep192E9Q4Y4 2514 aaKnown RBP10.12□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Utp20Q5XG71 2788 aaKnown RBP10.12□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Nav3Q80TN7 2359 aa10.11□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Gm9805F6YK59 57 aa10.11□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Wfdc12Q9JHY3 85 aa10.11□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Igkv8-16A0A0G2JDG9 121 aa10.1□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Gm10337F7DEP7 55 aa10.1□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Psors1c2Q80ZC9 134 aa10.1□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Hivep2Q3UHF7 2430 aa10.1□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Gm17689B3GLJ4 109 aa10.09□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Higd2aQ9CQJ1 106 aa10.09□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Reg3dQ9QUS9 175 aa10.09□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 Mrpl55Q9CZ83 127 aa10.09□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 9530003J23RikQ8BM26 151 aa10.08□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Ankrd11E9Q4F7 2643 aa10.08□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Rbm3O89086 153 aaKnown RBP10.08□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 A830005F24RikQ8BRT5 167 aa10.08□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igkv4-54A0A0G2JES9 117 aa10.07□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Defa27F2Z403 93 aa10.07□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 PrcdQ00LT2 53 aa10.07□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 E130218I03RikA0A0U1RNU5 63 aa10.07□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Chd6A3KFM7 2711 aa10.06□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Defa20Q45VN2 95 aa10.06□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igkv4-61A0A0G2JH00 117 aa10.06□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Pet100P0DJE0 76 aa10.06□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igkv8-24A0A140T8P5 121 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Pde6gP09174 87 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Tcl1b5P56845 121 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Dph3Q8K0W9 82 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Q8R092 253 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Msrb1Q9JLC3 116 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 A730071L15RikQ8C4X0 137 aa10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Hectd1Q69ZR2 2618 aaKnown RBP10.05□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Ptpn13Q64512 2453 aa10.04□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 BC067074F6RXI4 2391 aa10.04□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igkv3-9A0A140T8P4 119 aa10.04□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Gm10770F7D043 238 aa10.04□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Ighv2-2A0A075B5P8 116 aa10.03□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igkv8-34A0A0G2JDU0 121 aa10.03□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 P01821 116 aa10.03□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Igfn1Q3KNY0 2849 aa10.03□□□□□ -0.8
Ushbp1-201ENSMUST00000049184 Ccl21aP84444 133 aa10.02□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Ccl21bP86792 133 aa10.02□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Ccl21cP86793 133 aa10.02□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Usp9xP70398 2559 aaKnown RBP10.02□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Ly6c2P0CW03 131 aa9.99□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 A530084C06RikQ3UTW2 186 aa9.98□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 AY074887Q8R5F9 132 aa9.98□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 C2cd3Q52KB6 2323 aa9.97□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Wnk1P83741 2377 aa9.97□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 P06320 134 aa9.97□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 UqcrqQ9CQ69 82 aa9.97□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 H2al1bA0A087WP11 105 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 2310034G01RikA0A286YDL3 209 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Krtap11-1E9Q2E9 183 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 H2al1kJ3QP08 105 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 H2al1eQ810S6 105 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 H2al1mQ9DAD9 105 aa9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 FlncQ8VHX6 2726 aaKnown RBP9.96□□□□□ -0.81
Ushbp1-201ENSMUST00000049184 Igkv8-28A0A0G2JE47 121 aa9.96□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Vpreb2P13373 142 aa9.95□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Chd8Q09XV5 2582 aaKnown RBP9.95□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Cd99Q8VCN6 175 aa9.94□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Leap2Q91V13 76 aa9.94□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Nbeal1E9PYP2 2688 aa9.94□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Gm10401E9Q3K6 71 aa9.93□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Myo9aQ8C170 2542 aa9.93□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Defb37Q7TMD2 62 aa9.93□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Gm10570F6VB42 170 aa9.92□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Abca12E9Q876 2595 aa9.92□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 CubnQ9JLB4 3623 aa9.91□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Elof1P60003 83 aa9.91□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Igkv1-88A0A140T8N1 120 aa9.9□□□□□ -0.82
Ushbp1-201ENSMUST00000049184 Gm11011D3Z3L9 86 aa9.9□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Spink8Q09TK9 105 aa9.9□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Klk9Q32M27 251 aa9.9□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Xirp2Q4U4S6 3784 aa9.89□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Q8BT88 171 aa9.89□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Ufsp1Q9CZP0 217 aa9.89□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 A0A286YCN5 57 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 BC048502Q80Y74 154 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Zfyve26Q5DU37 2529 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Gm11213A0A1B0GR83 88 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Gm17577J3QNF7 156 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Gm17509Q9CZ61 145 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Nf1Q04690 2841 aa9.88□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Dad1P61804 113 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms