RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 NischQ80TM9 1593 aa26.59■■□□□ 1.85
Ushbp1-201ENSMUST00000049184 Abcc9P70170 1546 aa25.83■■□□□ 1.73
Ushbp1-201ENSMUST00000049184 Gm35339A0A140LHH9 1649 aa25.71■■□□□ 1.71
Ushbp1-201ENSMUST00000049184 Rtl1Q7M732 1744 aa25.54■■□□□ 1.68
Ushbp1-201ENSMUST00000049184 Rhox8Q6VSS7 320 aa25.45■■□□□ 1.67
Ushbp1-201ENSMUST00000049184 Rpgrip1Q9EPQ2 1331 aa25.33■■□□□ 1.65
Ushbp1-201ENSMUST00000049184 Ccdc180J3QNE4 1664 aa25.28■■□□□ 1.64
Ushbp1-201ENSMUST00000049184 Abcc8B2RUS7 1588 aa25.05■■□□□ 1.6
Ushbp1-201ENSMUST00000049184 Acin1Q9JIX8 1338 aaKnown RBP24.62■■□□□ 1.53
Ushbp1-201ENSMUST00000049184 Zcchc6Q5BLK4 1491 aaKnown RBP24.48■■□□□ 1.51
Ushbp1-201ENSMUST00000049184 Ehmt2Q9Z148 1263 aaKnown RBP24.12■■□□□ 1.45
Ushbp1-201ENSMUST00000049184 Dcaf1Q80TR8 1506 aa24.06■■□□□ 1.44
Ushbp1-201ENSMUST00000049184 HrcG5E8J6 738 aa24.06■■□□□ 1.44
Ushbp1-201ENSMUST00000049184 Pcgf6Q99NA9 353 aa24.03■■□□□ 1.44
Ushbp1-201ENSMUST00000049184 Ccdc136Q3TVA9 1136 aa23.52■■□□□ 1.36
Ushbp1-201ENSMUST00000049184 Trim41Q5NCC3 630 aa23.47■■□□□ 1.35
Ushbp1-201ENSMUST00000049184 Supt5hO55201 1082 aaKnown RBP23.42■■□□□ 1.34
Ushbp1-201ENSMUST00000049184 Rb1cc1Q9ESK9 1588 aa23.35■■□□□ 1.33
Ushbp1-201ENSMUST00000049184 Neurod1Q60867 357 aa23.13■■□□□ 1.29
Ushbp1-201ENSMUST00000049184 Cep164Q5DU05 1446 aa23.1■■□□□ 1.29
Ushbp1-201ENSMUST00000049184 Baz1aO88379 1555 aa23.09■■□□□ 1.29
Ushbp1-201ENSMUST00000049184 ScribQ80U72 1612 aa22.98■■□□□ 1.27
Ushbp1-201ENSMUST00000049184 Las1lA2BE28 776 aaKnown RBP22.86■■□□□ 1.25
Ushbp1-201ENSMUST00000049184 Zeb1Q64318 1117 aa22.84■■□□□ 1.25
Ushbp1-201ENSMUST00000049184 NefmP08553 848 aa22.8■■□□□ 1.24
Ushbp1-201ENSMUST00000049184 Kdm5dQ62240 1548 aa22.74■■□□□ 1.23
Ushbp1-201ENSMUST00000049184 Cngb1E1AZ71 1325 aa22.7■■□□□ 1.22
Ushbp1-201ENSMUST00000049184 Sall2Q9QX96 1004 aa22.63■■□□□ 1.21
Ushbp1-201ENSMUST00000049184 Smarca2Q6DIC0 1577 aa22.63■■□□□ 1.21
Ushbp1-201ENSMUST00000049184 Mier1Q5UAK0 511 aa22.62■■□□□ 1.21
Ushbp1-201ENSMUST00000049184 Rsf1E9PWW9 1441 aaKnown RBP22.54■■□□□ 1.2
Ushbp1-201ENSMUST00000049184 Gab3Q8BSM5 595 aa22.54■■□□□ 1.2
Ushbp1-201ENSMUST00000049184 Chic1Q8CBW7 227 aa22.53■■□□□ 1.2
Ushbp1-201ENSMUST00000049184 Anks4bQ8K3X6 423 aa22.53■■□□□ 1.2
Ushbp1-201ENSMUST00000049184 Crybg2B7ZCC2 1516 aa22.5■■□□□ 1.19
Ushbp1-201ENSMUST00000049184 1700123L14RikQ3V2K7 440 aa22.48■■□□□ 1.19
Ushbp1-201ENSMUST00000049184 NacadQ5SWP3 1504 aa22.46■■□□□ 1.19
Ushbp1-201ENSMUST00000049184 Csrnp3P59055 597 aa22.37■■□□□ 1.17
Ushbp1-201ENSMUST00000049184 Ccdc88bQ4QRL3 1481 aa22.28■■□□□ 1.16
Ushbp1-201ENSMUST00000049184 Wdr66E9Q743 1299 aa22.18■■□□□ 1.14
Ushbp1-201ENSMUST00000049184 Brd4Q9ESU6 1400 aaKnown RBP22.18■■□□□ 1.14
Ushbp1-201ENSMUST00000049184 Golga3P55937 1487 aa22.17■■□□□ 1.14
Ushbp1-201ENSMUST00000049184 Cdk11bP24788 784 aaKnown RBP22.15■■□□□ 1.14
Ushbp1-201ENSMUST00000049184 Aebp2Q9Z248 504 aaKnown RBP22.15■■□□□ 1.14
Ushbp1-201ENSMUST00000049184 Aplp2Q06335 707 aa22.13■■□□□ 1.13
Ushbp1-201ENSMUST00000049184 Myt1Q8CFC2 1127 aa22.11■■□□□ 1.13
Ushbp1-201ENSMUST00000049184 Nop58Q6DFW4 536 aaKnown RBP22.09■■□□□ 1.13
Ushbp1-201ENSMUST00000049184 ClspnQ80YR7 1315 aa22.07■■□□□ 1.12
Ushbp1-201ENSMUST00000049184 CenpbP27790 599 aa22.07■■□□□ 1.12
Ushbp1-201ENSMUST00000049184 UbtfP25976 765 aaKnown RBP22.02■■□□□ 1.12
Ushbp1-201ENSMUST00000049184 Sycp2Q9CUU3 1500 aa21.94■■□□□ 1.1
Ushbp1-201ENSMUST00000049184 Cecr2E9Q2Z1 1453 aa21.94■■□□□ 1.1
Ushbp1-201ENSMUST00000049184 Synj1Q8CHC4 1574 aa21.89■■□□□ 1.1
Ushbp1-201ENSMUST00000049184 Ppargc1bQ8VHJ7 1014 aa21.84■■□□□ 1.09
Ushbp1-201ENSMUST00000049184 TonslQ6NZL6 1363 aa21.78■■□□□ 1.08
Ushbp1-201ENSMUST00000049184 Esf1Q3V1V3 845 aaKnown RBP21.78■■□□□ 1.08
Ushbp1-201ENSMUST00000049184 Top2bQ64511 1612 aa21.77■■□□□ 1.07
Ushbp1-201ENSMUST00000049184 Rapgef2Q8CHG7 1496 aa21.74■■□□□ 1.07
Ushbp1-201ENSMUST00000049184 Gm38655A0A286YDK6 273 aa21.71■■□□□ 1.07
Ushbp1-201ENSMUST00000049184 CftrP26361 1476 aa21.69■■□□□ 1.06
Ushbp1-201ENSMUST00000049184 Cep162Q6ZQ06 1403 aa21.56■■□□□ 1.04
Ushbp1-201ENSMUST00000049184 Myt1lP97500 1187 aa21.55■■□□□ 1.04
Ushbp1-201ENSMUST00000049184 Cc2d2aQ8CFW7 1633 aa21.55■■□□□ 1.04
Ushbp1-201ENSMUST00000049184 Cttnbp2B9EJA2 1648 aa21.48■■□□□ 1.03
Ushbp1-201ENSMUST00000049184 Top2aQ01320 1528 aaKnown RBP21.46■■□□□ 1.03
Ushbp1-201ENSMUST00000049184 Ncapd3Q6ZQK0 1506 aa21.44■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 Fmn1Q05860 1466 aa21.44■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 Tnnt3Q9QZ47 272 aa21.43■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 BicraF8VPZ9 1578 aa21.41■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 Clip1Q922J3 1391 aa21.4■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 Plekhg3Q4VAC9 1341 aa21.4■■□□□ 1.02
Ushbp1-201ENSMUST00000049184 Hnrnpul2Q00PI9 745 aaKnown RBP21.39■■□□□ 1.01
Ushbp1-201ENSMUST00000049184 Fam71e1A1L3C1 212 aa21.37■■□□□ 1.01
Ushbp1-201ENSMUST00000049184 Npm2Q80W85 207 aa21.33■■□□□ 1
Ushbp1-201ENSMUST00000049184 SafbD3YXK2 937 aaKnown RBP21.32■■□□□ 1
Ushbp1-201ENSMUST00000049184 DiexfQ8BTT6 772 aaKnown RBP21.28■■□□□ 1
Ushbp1-201ENSMUST00000049184 Mapk8ip2Q9ERE9 830 aa21.26■□□□□ 0.99
Ushbp1-201ENSMUST00000049184 Eif4g1Q6NZJ6 1600 aaKnown RBP21.22■□□□□ 0.99
Ushbp1-201ENSMUST00000049184 Ap3b1Q9Z1T1 1105 aa21.19■□□□□ 0.98
Ushbp1-201ENSMUST00000049184 Eid3Q3V124 375 aa21.18■□□□□ 0.98
Ushbp1-201ENSMUST00000049184 Bcl11aQ9QYE3 773 aa21.16■□□□□ 0.98
Ushbp1-201ENSMUST00000049184 Smarca4Q3TKT4 1613 aaKnown RBP21.15■□□□□ 0.98
Ushbp1-201ENSMUST00000049184 Kdm5bQ80Y84 1544 aa21.14■□□□□ 0.97
Ushbp1-201ENSMUST00000049184 Anp32aO35381 247 aa21.07■□□□□ 0.96
Ushbp1-201ENSMUST00000049184 Znf710Q3U288 666 aa21.06■□□□□ 0.96
Ushbp1-201ENSMUST00000049184 Stra8P70278 393 aa21.05■□□□□ 0.96
Ushbp1-201ENSMUST00000049184 Rpap1Q80TE0 1409 aa21.02■□□□□ 0.96
Ushbp1-201ENSMUST00000049184 Arap1Q4LDD4 1452 aa21.02■□□□□ 0.95
Ushbp1-201ENSMUST00000049184 Eea1Q8BL66 1411 aa21.01■□□□□ 0.95
Ushbp1-201ENSMUST00000049184 Arhgap35Q91YM2 1499 aa20.99■□□□□ 0.95
Ushbp1-201ENSMUST00000049184 Ccdc18Q640L5 1455 aa20.98■□□□□ 0.95
Ushbp1-201ENSMUST00000049184 Baz1bQ9Z277 1479 aa20.95■□□□□ 0.94
Ushbp1-201ENSMUST00000049184 Arhgef5E9Q7D5 1581 aa20.94■□□□□ 0.94
Ushbp1-201ENSMUST00000049184 TchhA0A0B4J1F9 1599 aa20.91■□□□□ 0.94
Ushbp1-201ENSMUST00000049184 NclP09405 707 aaKnown RBP20.88■□□□□ 0.93
Ushbp1-201ENSMUST00000049184 Setd5Q5XJV7 1441 aa20.88■□□□□ 0.93
Ushbp1-201ENSMUST00000049184 Rtl5Q5DTT4 599 aa20.87■□□□□ 0.93
Ushbp1-201ENSMUST00000049184 NrkQ9R0G8 1455 aa20.84■□□□□ 0.93
Ushbp1-201ENSMUST00000049184 Calr4Q3TQS0 420 aa20.84■□□□□ 0.93
Ushbp1-201ENSMUST00000049184 PtprkP35822 1457 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms