Protein–RNA interactions for Protein: P86792

Ccl21b, C-C motif chemokine 21b, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21bP86792 Gm25239-201ENSMUST00000174915 86 ntBASIC34.13■■■■□ 3.05
Ccl21bP86792 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ccl21bP86792 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccl21bP86792 Gm24109-201ENSMUST00000175489 103 ntBASIC29.82■■■□□ 2.36
Ccl21bP86792 Gm15042-201ENSMUST00000120212 883 ntBASIC29.37■■■□□ 2.29
Ccl21bP86792 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ccl21bP86792 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccl21bP86792 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ccl21bP86792 Gm15045-201ENSMUST00000117359 883 ntBASIC28.61■■■□□ 2.17
Ccl21bP86792 Gm23366-201ENSMUST00000175022 89 ntBASIC28.45■■■□□ 2.14
Ccl21bP86792 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ccl21bP86792 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.97■■■□□ 2.07
Ccl21bP86792 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
Ccl21bP86792 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ccl21bP86792 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.65■■■□□ 2.02
Ccl21bP86792 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ccl21bP86792 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ccl21bP86792 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Ccl21bP86792 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ccl21bP86792 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.15■■□□□ 1.94
Ccl21bP86792 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ccl21bP86792 Gm25238-201ENSMUST00000174914 89 ntBASIC27.07■■□□□ 1.92
Ccl21bP86792 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccl21bP86792 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccl21bP86792 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
Ccl21bP86792 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccl21bP86792 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccl21bP86792 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Ccl21bP86792 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccl21bP86792 Gm25262-201ENSMUST00000174934 133 ntBASIC26.2■■□□□ 1.78
Ccl21bP86792 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccl21bP86792 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.15■■□□□ 1.78
Ccl21bP86792 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.11■■□□□ 1.77
Ccl21bP86792 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.05■■□□□ 1.76
Ccl21bP86792 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ccl21bP86792 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ccl21bP86792 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Ccl21bP86792 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.86■■□□□ 1.73
Ccl21bP86792 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ccl21bP86792 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.82■■□□□ 1.72
Ccl21bP86792 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.79■■□□□ 1.72
Ccl21bP86792 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ccl21bP86792 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.77■■□□□ 1.72
Ccl21bP86792 Gm26115-201ENSMUST00000175605 87 ntBASIC25.75■■□□□ 1.71
Ccl21bP86792 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ccl21bP86792 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.65■■□□□ 1.7
Ccl21bP86792 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccl21bP86792 Gm27325-201ENSMUST00000175467 74 ntBASIC25.63■■□□□ 1.69
Ccl21bP86792 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ccl21bP86792 Gm8109-201ENSMUST00000194076 746 ntBASIC25.53■■□□□ 1.68
Ccl21bP86792 Rab21-202ENSMUST00000218831 843 ntBASIC25.49■■□□□ 1.67
Ccl21bP86792 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.49■■□□□ 1.67
Ccl21bP86792 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ccl21bP86792 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ccl21bP86792 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ccl21bP86792 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ccl21bP86792 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ccl21bP86792 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ccl21bP86792 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.13■■□□□ 1.61
Ccl21bP86792 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ccl21bP86792 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.06■■□□□ 1.6
Ccl21bP86792 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ccl21bP86792 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ccl21bP86792 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.99■■□□□ 1.59
Ccl21bP86792 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.96■■□□□ 1.59
Ccl21bP86792 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ccl21bP86792 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.93■■□□□ 1.58
Ccl21bP86792 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ccl21bP86792 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccl21bP86792 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccl21bP86792 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ccl21bP86792 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccl21bP86792 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.7■■□□□ 1.55
Ccl21bP86792 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ccl21bP86792 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.69■■□□□ 1.54
Ccl21bP86792 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccl21bP86792 Gm24804-201ENSMUST00000174982 85 ntBASIC24.64■■□□□ 1.54
Ccl21bP86792 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccl21bP86792 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccl21bP86792 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.51■■□□□ 1.51
Ccl21bP86792 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Ccl21bP86792 Gm27322-201ENSMUST00000184007 104 ntBASIC24.44■■□□□ 1.5
Ccl21bP86792 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.41■■□□□ 1.5
Ccl21bP86792 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccl21bP86792 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Ccl21bP86792 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.4■■□□□ 1.5
Ccl21bP86792 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.38■■□□□ 1.49
Ccl21bP86792 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.35■■□□□ 1.49
Ccl21bP86792 Psd-208ENSMUST00000224556 2034 ntBASIC24.35■■□□□ 1.49
Ccl21bP86792 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Ccl21bP86792 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Ccl21bP86792 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.31■■□□□ 1.48
Ccl21bP86792 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.29■■□□□ 1.48
Ccl21bP86792 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.28■■□□□ 1.48
Ccl21bP86792 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccl21bP86792 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccl21bP86792 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ccl21bP86792 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ccl21bP86792 Zfp131-205ENSMUST00000223812 663 ntBASIC24.19■■□□□ 1.46
Ccl21bP86792 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms