RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Lyrm7Q9DA03 104 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 2310009B15RikA0A0A6YWI4 143 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Gm7138L7N2C3 230 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 P01819 144 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 P01896 185 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Dnal4Q9DCM4 105 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Gm3238W4VSP7 230 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Dnah3Q8BW94 4083 aa13.93□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Gm16181B0V2H2 73 aa13.93□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Gm5153P01627 120 aa13.93□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Znf414Q9DCK4 299 aa13.92□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Igkv8-24A0A140T8P5 121 aa13.91□□□□□ -0.18
Cdx1-201ENSMUST00000025521 PtprqP0C5E4 2300 aa13.91□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Cox7bP56393 80 aa13.91□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Defb29Q8BGW9 78 aa13.91□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Trav3-4A0A075B654 114 aa13.89□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm5142Q8C5X9 133 aa13.89□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm5617Q91VN2 117 aa13.88□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Tmem213Q08EA8 116 aa13.88□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Trav13-2A0A075B649 110 aa13.87□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm10845Q3UNY9 185 aa13.87□□□□□ -0.19
Cdx1-201ENSMUST00000025521 5730596B20RikQ8BQ08 205 aa13.87□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Spata3Q9D9T6 193 aa13.87□□□□□ -0.19
Cdx1-201ENSMUST00000025521 AplnQ9R0R4 77 aa13.87□□□□□ -0.19
Cdx1-201ENSMUST00000025521 CnbpP53996 178 aaKnown RBP13.86□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm36176A0A1W2P8D5 158 aa13.86□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm17509Q9CZ61 145 aa13.86□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Igkv1-35A0A0G2JDE5 120 aa13.85□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Gm10518F6UQQ9 182 aa13.85□□□□□ -0.19
Cdx1-201ENSMUST00000025521 MifP34884 115 aaKnown RBP13.85□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Reg3bP35230 175 aa13.85□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Igkv8-16A0A0G2JDG9 121 aa13.84□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Igkv4-92A0A0B4J1I2 117 aa13.83□□□□□ -0.19
Cdx1-201ENSMUST00000025521 Cox7b2Q9D2H1 82 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Notch1Q01705 2531 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Col6a5A6H584 2640 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Trav13n-2A0A0G2JF93 110 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 9430015G10RikA2ASP7 199 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Ube2d4D3YUH6 135 aa13.81□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Ighv13-2A0A0A6YWN3 119 aa13.8□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Defb10Q8R2I8 73 aa13.8□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Reg3dQ9QUS9 175 aa13.8□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Spata45Q9CVW4 97 aa13.79□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Xcl1P47993 114 aa13.78□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Wfdc12Q9JHY3 85 aa13.78□□□□□ -0.2
Cdx1-201ENSMUST00000025521 Hbb-b2P02089 147 aa13.76□□□□□ -0.21
Cdx1-201ENSMUST00000025521 AY074887Q8R5F9 132 aa13.76□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Rpl39lQ9CQD0 51 aa13.76□□□□□ -0.21
Cdx1-201ENSMUST00000025521 1810062G17RikG3X8Y2 129 aa13.76□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Mrpl52Q9D0Y8 121 aa13.75□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Anapc13Q8R034 74 aa13.74□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Trav14d-3-dv8A0A075B619 120 aa13.73□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Atp5eP56382 52 aa13.73□□□□□ -0.21
Cdx1-201ENSMUST00000025521 A730009L09RikA0A1B0GS82 72 aa13.72□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Gm9805F6YK59 57 aa13.72□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Gm10770F7D043 238 aa13.72□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Sprr4Q8CGN8 76 aa13.71□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Ufsp1Q9CZP0 217 aa13.71□□□□□ -0.21
Cdx1-201ENSMUST00000025521 Ighv10-1A0A0B4J1J6 119 aa13.7□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Ifitm6A0A1B0GS75 124 aa13.7□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Dnah6E9Q0B6 4144 aa13.69□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Trav14-1A0A0G2JF94 121 aa13.69□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Rpl18aP62717 176 aaKnown RBP13.69□□□□□ -0.22
Cdx1-201ENSMUST00000025521 AW011738F6S7Q2 159 aa13.68□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Defa2P28309 93 aa13.68□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Dnah17Q69Z23 4481 aa13.68□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Dnah10D3YYQ8 4591 aa13.68□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Camk2n2Q78WH7 79 aa13.67□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Klk12B2RVZ0 247 aa13.66□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Dnah14A0A140LIJ4 4489 aa13.66□□□□□ -0.22
Cdx1-201ENSMUST00000025521 VwfQ8CIZ8 2813 aa13.66□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Gm10320E9PW43 113 aa13.65□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Gm7137J3QMW1 236 aa13.65□□□□□ -0.22
Cdx1-201ENSMUST00000025521 MrapQ9D159 127 aa13.65□□□□□ -0.22
Cdx1-201ENSMUST00000025521 Gm17577J3QNF7 156 aa13.63□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Gm10251J3QPM5 127 aa13.63□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Sslp1Q3UN54 99 aa13.63□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Ighv10-3A0A075B5T6 119 aa13.61□□□□□ -0.23
Cdx1-201ENSMUST00000025521 BC048502Q80Y74 154 aa13.61□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Gm16485Q8C4B7 115 aa13.6□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Igkv4-58A0A0G2JGI6 119 aa13.59□□□□□ -0.23
Cdx1-201ENSMUST00000025521 2310034G01RikA0A286YDL3 209 aa13.59□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Gm7102J3QQ10 178 aa13.59□□□□□ -0.23
Cdx1-201ENSMUST00000025521 A0A286YCN5 57 aa13.58□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Cdk2ap2Q9CPY4 127 aa13.58□□□□□ -0.23
Cdx1-201ENSMUST00000025521 Igkv2-109A0A075B5K6 120 aa13.58□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Defa20Q45VN2 95 aa13.56□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Dnah1E9Q8T7 4250 aa13.56□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Igkv8-26A0A075B5N5 123 aa13.55□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Elof1P60003 83 aa13.55□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Q9DAA7 145 aa13.55□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Msrb1Q9JLC3 116 aa13.54□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Gm3618D3Z4P5 127 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Gm7276Q3TYW4 209 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Sprr1aQ62266 144 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 4930519P11RikQ9CUJ8 166 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Gm2916Q9D9B9 127 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Inafm2A0A1L1STD6 152 aa13.53□□□□□ -0.24
Cdx1-201ENSMUST00000025521 Igkv1-88A0A140T8N1 120 aa13.52□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Gm11627A6PWP4 55 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms