RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Cd99Q8VCN6 175 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Zfp462B1AWL2 2495 aaKnown RBP12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Trav14d-3-dv8A0A075B619 120 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Krtap16-1A2A5X5 502 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Erdr1J3QMM0 206 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Gm904Q3V2L5 102 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 5730596B20RikQ8BQ08 205 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Znf414Q9DCK4 299 aa12.09□□□□□ -0.47
Ddx28-201ENSMUST00000058579 Trav13d-4A0A0G2JFX3 110 aa12.08□□□□□ -0.48
Ddx28-201ENSMUST00000058579 P01755 137 aa12.08□□□□□ -0.48
Ddx28-201ENSMUST00000058579 SbsponQ3UPR9 264 aa12.08□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Igkv1-117A0A140T8M0 119 aa12.08□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Myo18bE9PV66 2605 aa12.08□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Tomm7Q9D173 55 aa12.07□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Ss18l2Q9D174 77 aa12.07□□□□□ -0.48
Ddx28-201ENSMUST00000058579 B230359F08RikA0A0B4J1K3 109 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Esm1Q9QYY7 184 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Pla2g1bQ9Z0Y2 146 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Ighv2-9-1A0A075B697 116 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Gm43218A0A0G2JGT0 114 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Cox6b1P56391 86 aaKnown RBP12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 4930524J08RikQ9CUJ5 163 aa12.06□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Gm28539A0A087WSL9 92 aa12.05□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Defb29Q8BGW9 78 aa12.04□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Igkv1-35A0A0G2JDE5 120 aa12.04□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Ly6c2P0CW03 131 aa12.04□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Gm10735Q3US96 136 aa12.03□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Acyp1P56376 99 aa12.03□□□□□ -0.48
Ddx28-201ENSMUST00000058579 Spink4O35679 86 aa12.02□□□□□ -0.49
Ddx28-201ENSMUST00000058579 NipblQ6KCD5 2798 aaKnown RBP12.02□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Gm16381A0A1Y7VKT9 73 aa12.02□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Xcl1P47993 114 aa12.02□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Bles03Q8VD62 251 aa12.02□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Trav3-4A0A075B654 114 aa12□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Setd2E9Q5F9 2537 aa12□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Akap13E9Q394 2776 aa11.99□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Igkv1-99F6XWB2 120 aa11.98□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Zfp951A0A087WRH0 451 aa11.98□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Igkv4-53A0A0G2JFC6 119 aa11.98□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Defa1P11477 93 aa11.98□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Odf3l2Q3TZ65 277 aa11.98□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Gm3250E9Q1M3 230 aa11.97□□□□□ -0.49
Ddx28-201ENSMUST00000058579 BB014433Q8C5R5 389 aa11.97□□□□□ -0.49
Ddx28-201ENSMUST00000058579 PkigO70139 76 aa11.97□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Trav13-1A0A075B644 110 aa11.96□□□□□ -0.49
Ddx28-201ENSMUST00000058579 Ighv1-56A0A0A6YXG2 117 aa11.95□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Gm9767G3X930 207 aa11.95□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Tmem223Q9CQE2 199 aaKnown RBP11.95□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Gm867A0A1W2P7T4 151 aa11.94□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Sprr1bQ62267 153 aa11.94□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Igkv4-54A0A0G2JES9 117 aa11.94□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Dnal4Q9DCM4 105 aa11.94□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Trav13n-2A0A0G2JF93 110 aa11.93□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Igkv6-13A0A0G2JGY3 119 aa11.93□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Smim26Q3V460 107 aa11.93□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Igkv4-61A0A0G2JH00 117 aa11.92□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Smim20D3Z7Q2 69 aa11.92□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Brwd1Q921C3 2304 aa11.92□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Hspg2Q05793 3707 aaKnown RBP11.91□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Tenm4Q3UHK6 2771 aa11.91□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Apoc4Q61268 124 aa11.91□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Prss58Q8BW11 241 aa11.91□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Gm5142Q8C5X9 133 aa11.91□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Mzt1Q8BUR9 78 aa11.9□□□□□ -0.5
Ddx28-201ENSMUST00000058579 SmcpP15265 143 aa11.9□□□□□ -0.5
Ddx28-201ENSMUST00000058579 Defa16P50714 93 aa11.9□□□□□ -0.5
Ddx28-201ENSMUST00000058579 PrcdQ00LT2 53 aa11.9□□□□□ -0.5
Ddx28-201ENSMUST00000058579 1810062G17RikG3X8Y2 129 aa11.89□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Hbb-b2P02089 147 aa11.89□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Psors1c2Q80ZC9 134 aa11.89□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Krtap24-1G3X9A2 248 aa11.89□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Prh1P05142 261 aa11.89□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Ighv1-59A0A0A6YXE0 117 aa11.88□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Igf1P05017 153 aa11.88□□□□□ -0.51
Ddx28-201ENSMUST00000058579 4930519P11RikQ9CUJ8 166 aa11.88□□□□□ -0.51
Ddx28-201ENSMUST00000058579 SvipQ3UZP4 77 aa11.86□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Defa25Q5G864 92 aa11.86□□□□□ -0.51
Ddx28-201ENSMUST00000058579 CicQ924A2 2510 aa11.86□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Tcl1b3P56842 122 aa11.86□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Fbn1Q61554 2873 aaKnown RBP11.86□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Igkv8-18A0A0B4J1J3 123 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Ifitm6A0A1B0GS75 124 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Gm7102J3QQ10 178 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Dand5Q76LW6 185 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Gm3233E9Q2H5 230 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Rpl39lQ9CQD0 51 aa11.85□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Trav9n-4A0A075B631 113 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Q8R092 253 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Leap2Q91V13 76 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Trav13-2A0A075B649 110 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Trbv13-2A0A140T8N6 113 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 C530025M09RikF6RGA8 229 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Gm5153P01627 120 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Tmem86bQ497J1 226 aa11.84□□□□□ -0.51
Ddx28-201ENSMUST00000058579 Ighv8-11A0A075B5X4 119 aa11.83□□□□□ -0.52
Ddx28-201ENSMUST00000058579 Gm10845Q3UNY9 185 aa11.82□□□□□ -0.52
Ddx28-201ENSMUST00000058579 2010109I03RikQ9CQ11 111 aa11.81□□□□□ -0.52
Ddx28-201ENSMUST00000058579 Igkv3-9A0A140T8P4 119 aa11.8□□□□□ -0.52
Ddx28-201ENSMUST00000058579 MifP34884 115 aaKnown RBP11.8□□□□□ -0.52
Ddx28-201ENSMUST00000058579 Hist1h4aP62806 103 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms