RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 NischQ80TM9 1593 aa32.93■■■□□ 2.86
Ddx28-201ENSMUST00000058579 Gm35339A0A140LHH9 1649 aa32.63■■■□□ 2.81
Ddx28-201ENSMUST00000058579 Abcc9P70170 1546 aa31.94■■■□□ 2.7
Ddx28-201ENSMUST00000058579 Abcc8B2RUS7 1588 aa31.4■■■□□ 2.62
Ddx28-201ENSMUST00000058579 Rhox8Q6VSS7 320 aa30.62■■■□□ 2.49
Ddx28-201ENSMUST00000058579 Rtl1Q7M732 1744 aa30.46■■■□□ 2.47
Ddx28-201ENSMUST00000058579 Ccdc180J3QNE4 1664 aa29.96■■■□□ 2.39
Ddx28-201ENSMUST00000058579 ScribQ80U72 1612 aa29.56■■■□□ 2.32
Ddx28-201ENSMUST00000058579 Zcchc6Q5BLK4 1491 aaKnown RBP29.28■■■□□ 2.28
Ddx28-201ENSMUST00000058579 Dcaf1Q80TR8 1506 aa29.17■■■□□ 2.26
Ddx28-201ENSMUST00000058579 Kdm5dQ62240 1548 aa28.89■■■□□ 2.22
Ddx28-201ENSMUST00000058579 Rpgrip1Q9EPQ2 1331 aa28.85■■■□□ 2.21
Ddx28-201ENSMUST00000058579 Rb1cc1Q9ESK9 1588 aa28.82■■■□□ 2.2
Ddx28-201ENSMUST00000058579 NacadQ5SWP3 1504 aa28.71■■■□□ 2.19
Ddx28-201ENSMUST00000058579 HrcG5E8J6 738 aa28.53■■■□□ 2.16
Ddx28-201ENSMUST00000058579 Baz1aO88379 1555 aa28.46■■■□□ 2.15
Ddx28-201ENSMUST00000058579 Ccdc136Q3TVA9 1136 aa28.38■■■□□ 2.13
Ddx28-201ENSMUST00000058579 Acin1Q9JIX8 1338 aaKnown RBP28.31■■■□□ 2.12
Ddx28-201ENSMUST00000058579 Sycp2Q9CUU3 1500 aa28.11■■■□□ 2.09
Ddx28-201ENSMUST00000058579 Ehmt2Q9Z148 1263 aaKnown RBP28.03■■■□□ 2.08
Ddx28-201ENSMUST00000058579 Crybg2B7ZCC2 1516 aa28.01■■■□□ 2.07
Ddx28-201ENSMUST00000058579 Trim41Q5NCC3 630 aa27.88■■■□□ 2.05
Ddx28-201ENSMUST00000058579 Smarca2Q6DIC0 1577 aa27.77■■■□□ 2.04
Ddx28-201ENSMUST00000058579 Cep164Q5DU05 1446 aa27.58■■■□□ 2.01
Ddx28-201ENSMUST00000058579 BicraF8VPZ9 1578 aa27.56■■■□□ 2
Ddx28-201ENSMUST00000058579 Pcgf6Q99NA9 353 aa27.27■■□□□ 1.96
Ddx28-201ENSMUST00000058579 Cecr2E9Q2Z1 1453 aa27.25■■□□□ 1.95
Ddx28-201ENSMUST00000058579 Rsf1E9PWW9 1441 aaKnown RBP27.12■■□□□ 1.93
Ddx28-201ENSMUST00000058579 Brd4Q9ESU6 1400 aaKnown RBP27.12■■□□□ 1.93
Ddx28-201ENSMUST00000058579 Cngb1E1AZ71 1325 aa27.12■■□□□ 1.93
Ddx28-201ENSMUST00000058579 Chic1Q8CBW7 227 aa27.09■■□□□ 1.93
Ddx28-201ENSMUST00000058579 Golga3P55937 1487 aa26.94■■□□□ 1.9
Ddx28-201ENSMUST00000058579 Gab3Q8BSM5 595 aa26.93■■□□□ 1.9
Ddx28-201ENSMUST00000058579 Synj1Q8CHC4 1574 aa26.92■■□□□ 1.9
Ddx28-201ENSMUST00000058579 Ccdc88bQ4QRL3 1481 aa26.9■■□□□ 1.9
Ddx28-201ENSMUST00000058579 Smarca4Q3TKT4 1613 aaKnown RBP26.8■■□□□ 1.88
Ddx28-201ENSMUST00000058579 CftrP26361 1476 aa26.79■■□□□ 1.88
Ddx28-201ENSMUST00000058579 Supt5hO55201 1082 aaKnown RBP26.77■■□□□ 1.88
Ddx28-201ENSMUST00000058579 Cttnbp2B9EJA2 1648 aa26.69■■□□□ 1.86
Ddx28-201ENSMUST00000058579 Top2bQ64511 1612 aa26.59■■□□□ 1.85
Ddx28-201ENSMUST00000058579 Esf1Q3V1V3 845 aaKnown RBP26.59■■□□□ 1.85
Ddx28-201ENSMUST00000058579 NefmP08553 848 aa26.55■■□□□ 1.84
Ddx28-201ENSMUST00000058579 Mier1Q5UAK0 511 aa26.51■■□□□ 1.84
Ddx28-201ENSMUST00000058579 Iqgap2Q3UQ44 1575 aa26.5■■□□□ 1.83
Ddx28-201ENSMUST00000058579 Atad2bE9Q166 1460 aaKnown RBP26.46■■□□□ 1.83
Ddx28-201ENSMUST00000058579 Pds5bQ4VA53 1446 aaKnown RBP26.43■■□□□ 1.82
Ddx28-201ENSMUST00000058579 Zeb1Q64318 1117 aa26.4■■□□□ 1.82
Ddx28-201ENSMUST00000058579 Cc2d2aQ8CFW7 1633 aa26.33■■□□□ 1.81
Ddx28-201ENSMUST00000058579 Rapgef2Q8CHG7 1496 aa26.22■■□□□ 1.79
Ddx28-201ENSMUST00000058579 Fmn1Q05860 1466 aa26.17■■□□□ 1.78
Ddx28-201ENSMUST00000058579 Neurod1Q60867 357 aa26.14■■□□□ 1.78
Ddx28-201ENSMUST00000058579 Top2aQ01320 1528 aaKnown RBP26.11■■□□□ 1.77
Ddx28-201ENSMUST00000058579 Sall2Q9QX96 1004 aa26.07■■□□□ 1.76
Ddx28-201ENSMUST00000058579 UbtfP25976 765 aaKnown RBP26.06■■□□□ 1.76
Ddx28-201ENSMUST00000058579 Frmpd1A2AKB4 1549 aa26.04■■□□□ 1.76
Ddx28-201ENSMUST00000058579 Wdr62Q3U3T8 1523 aa26.03■■□□□ 1.76
Ddx28-201ENSMUST00000058579 Cep162Q6ZQ06 1403 aa26■■□□□ 1.75
Ddx28-201ENSMUST00000058579 Ercc6F8VPZ5 1481 aa25.95■■□□□ 1.75
Ddx28-201ENSMUST00000058579 Myt1lP97500 1187 aa25.89■■□□□ 1.74
Ddx28-201ENSMUST00000058579 Las1lA2BE28 776 aaKnown RBP25.83■■□□□ 1.72
Ddx28-201ENSMUST00000058579 Unc13aQ4KUS2 1712 aa25.79■■□□□ 1.72
Ddx28-201ENSMUST00000058579 Npm2Q80W85 207 aa25.78■■□□□ 1.72
Ddx28-201ENSMUST00000058579 TnnQ80Z71 1560 aa25.75■■□□□ 1.71
Ddx28-201ENSMUST00000058579 Eif4g1Q6NZJ6 1600 aaKnown RBP25.73■■□□□ 1.71
Ddx28-201ENSMUST00000058579 Thoc2B1AZI6 1594 aaKnown RBP25.72■■□□□ 1.71
Ddx28-201ENSMUST00000058579 Aebp2Q9Z248 504 aaKnown RBP25.71■■□□□ 1.71
Ddx28-201ENSMUST00000058579 Wdr66E9Q743 1299 aa25.7■■□□□ 1.7
Ddx28-201ENSMUST00000058579 Clip1Q922J3 1391 aa25.68■■□□□ 1.7
Ddx28-201ENSMUST00000058579 Lamc3Q9R0B6 1581 aa25.66■■□□□ 1.7
Ddx28-201ENSMUST00000058579 Kif15Q6P9L6 1387 aa25.6■■□□□ 1.69
Ddx28-201ENSMUST00000058579 ClspnQ80YR7 1315 aa25.59■■□□□ 1.69
Ddx28-201ENSMUST00000058579 Anks4bQ8K3X6 423 aa25.59■■□□□ 1.69
Ddx28-201ENSMUST00000058579 Plekhg3Q4VAC9 1341 aa25.57■■□□□ 1.68
Ddx28-201ENSMUST00000058579 Phldb1Q6PDH0 1371 aaKnown RBP25.54■■□□□ 1.68
Ddx28-201ENSMUST00000058579 TonslQ6NZL6 1363 aa25.53■■□□□ 1.68
Ddx28-201ENSMUST00000058579 Ncapd3Q6ZQK0 1506 aa25.5■■□□□ 1.67
Ddx28-201ENSMUST00000058579 Arhgap35Q91YM2 1499 aa25.48■■□□□ 1.67
Ddx28-201ENSMUST00000058579 Il27Q8K3I6 234 aa25.43■■□□□ 1.66
Ddx28-201ENSMUST00000058579 NrkQ9R0G8 1455 aa25.4■■□□□ 1.66
Ddx28-201ENSMUST00000058579 PtprkP35822 1457 aa25.4■■□□□ 1.66
Ddx28-201ENSMUST00000058579 Cdk11bP24788 784 aaKnown RBP25.4■■□□□ 1.66
Ddx28-201ENSMUST00000058579 Camsap1A2AHC3 1581 aa25.4■■□□□ 1.66
Ddx28-201ENSMUST00000058579 Nop58Q6DFW4 536 aaKnown RBP25.38■■□□□ 1.65
Ddx28-201ENSMUST00000058579 Fam135aQ6NS59 1506 aa25.38■■□□□ 1.65
Ddx28-201ENSMUST00000058579 Ubl4bQ9CQ84 188 aa25.38■■□□□ 1.65
Ddx28-201ENSMUST00000058579 Eea1Q8BL66 1411 aa25.35■■□□□ 1.65
Ddx28-201ENSMUST00000058579 Arap1Q4LDD4 1452 aa25.33■■□□□ 1.65
Ddx28-201ENSMUST00000058579 Ppargc1bQ8VHJ7 1014 aa25.33■■□□□ 1.64
Ddx28-201ENSMUST00000058579 Ccdc18Q640L5 1455 aa25.31■■□□□ 1.64
Ddx28-201ENSMUST00000058579 Cux2P70298 1426 aa25.27■■□□□ 1.64
Ddx28-201ENSMUST00000058579 Csrnp3P59055 597 aa25.26■■□□□ 1.63
Ddx28-201ENSMUST00000058579 Arhgef5E9Q7D5 1581 aa25.25■■□□□ 1.63
Ddx28-201ENSMUST00000058579 Shroom4Q1W617 1475 aa25.24■■□□□ 1.63
Ddx28-201ENSMUST00000058579 Setd5Q5XJV7 1441 aa25.22■■□□□ 1.63
Ddx28-201ENSMUST00000058579 Map3k1P53349 1493 aa25.21■■□□□ 1.63
Ddx28-201ENSMUST00000058579 1700123L14RikQ3V2K7 440 aa25.2■■□□□ 1.62
Ddx28-201ENSMUST00000058579 Ap3b1Q9Z1T1 1105 aa25.19■■□□□ 1.62
Ddx28-201ENSMUST00000058579 Grin2bQ01097 1482 aa25.18■■□□□ 1.62
Ddx28-201ENSMUST00000058579 Kdm5bQ80Y84 1544 aa25.16■■□□□ 1.62
Ddx28-201ENSMUST00000058579 Npm1Q61937 292 aaKnown RBP25.14■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 90.7 ms