RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 PrcdQ00LT2 53 aa5.4□□□□□ -1.54
Scn3a-202ENSMUST00000100069 P04942 107 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Prr3Q811B5 190 aaKnown RBP5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Wfdc2Q9DAU7 174 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Wfdc11A2A5H7 82 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Odf3l1Q810P2 275 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm11733Q8BQP1 125 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Lyg1Q9D7Q0 197 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tax1bp3Q9DBG9 124 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 AgrnA2ASQ1 1950 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Prrc2aQ7TSC1 2158 aaKnown RBP5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 H2al1bA0A087WP11 105 aa5.4□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Fer1l4A3KGK3 1992 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Foxc1Q61572 553 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm16503Q8C6M9 103 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ube2aQ9Z255 152 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tanc2A2A690 1994 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Runx1Q03347 451 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 PifoQ9D9W1 207 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Defb29Q8BGW9 78 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ormdl1Q921I0 153 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tmem254aP0DN89 123 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tmem254bP0DN90 123 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tmem254cP0DN91 123 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ppp1r32Q148A4 427 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Obox8V9GWY9 217 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Naa38Q9D2U5 125 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv3-1A0A075B5S6 116 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tet1Q3URK3 2007 aaKnown RBP5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Igkv1-122A0A140T8M9 119 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Vpreb3D3Z6J4 130 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Fgf6P21658 208 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Q08AU9 97 aa5.39□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv1-12A0A0A6YXJ9 117 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gp9O88186 177 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01750 117 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm14137Q8CE97 175 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ramp1Q9WTJ5 148 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Camk2n2Q78WH7 79 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm10251J3QPM5 127 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Mrps12O35680 139 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Defb18Q30KP5 85 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm2916Q9D9B9 127 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 H2al1kJ3QP08 105 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ndufb4Q9CQC7 129 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Hivep3A2A884 2348 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Igkv2-137A0A0B4J1H6 120 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 E030018B13RikJ3QMS9 113 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Usf3B2RUQ2 2221 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm17455G3UW87 128 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 AngP21570 145 aa5.38□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Znrd1Q791N7 123 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 PpbpQ9EQI5 113 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Q80X32 188 aaKnown RBP5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv6-7A0A0A6YWU3 119 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv13-2A0A0A6YWN3 119 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv8-8A0A0A6YXQ0 119 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01789 122 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Sdk2Q6V4S5 2176 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Col5a3Q9JLI2 1739 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Pcdh15Q99PJ1 1943 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Wisp3D3Z5L9 354 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm10518F6UQQ9 182 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Rbx1P62878 108 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 SelenokQ9JLJ1 94 aa5.37□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ndufb1P0DN34 57 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01793 123 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 7420426K07RikQ3UX66 186 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01794 123 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Fancd2osQ9D4K4 178 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Rpl18aP62717 176 aaKnown RBP5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Prok1Q14A28 105 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tnfrsf13bQ9ET35 249 aa5.36□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Igkv3-10A0A0G2JGN0 119 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 3110021N24RikJ3QMN2 152 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P04943 107 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Odf3Q920N1 254 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm9513B3GLJ6 99 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 F5O88783 2183 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Dennd4cA6H8H2 1906 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Igkv3-4A0A140T8Q4 119 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Hoxb4P10284 250 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Msrb3Q8BU85 253 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 DysfQ9ESD7 2090 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm21994F6T2D2 329 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 CadB2RQC6 2225 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Notch3Q61982 2318 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv1-53A0A075B5W3 117 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Trav12d-3A0A075B6A4 115 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01748 117 aa5.35□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm20730A0A075B5J6 119 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 P01753 117 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Foxi2Q3I5G5 311 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Vopp1Q8R1C3 172 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 PtprsB0V2N1 1907 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Trav9d-3A0A075B695 113 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gm17577J3QNF7 156 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Mapk1ip1lQ8BH93 242 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Trav9-2A0A075B647 113 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Ighv1-11A0A0A6YWI9 117 aa5.34□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms