Protein–RNA interactions for Protein: A0A0A6YXQ0

Ighv8-8, Immunoglobulin heavy variable 8-8 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-8A0A0A6YXQ0 Gm25239-201ENSMUST00000174915 86 ntBASIC25.44■■□□□ 1.66
Ighv8-8A0A0A6YXQ0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ighv8-8A0A0A6YXQ0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ighv8-8A0A0A6YXQ0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ighv8-8A0A0A6YXQ0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv8-8A0A0A6YXQ0 Psd-208ENSMUST00000224556 2034 ntBASIC23.53■■□□□ 1.36
Ighv8-8A0A0A6YXQ0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ighv8-8A0A0A6YXQ0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ighv8-8A0A0A6YXQ0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv8-8A0A0A6YXQ0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ighv8-8A0A0A6YXQ0 Gm15042-201ENSMUST00000120212 883 ntBASIC22.5■■□□□ 1.19
Ighv8-8A0A0A6YXQ0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ighv8-8A0A0A6YXQ0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ighv8-8A0A0A6YXQ0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv8-8A0A0A6YXQ0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv8-8A0A0A6YXQ0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv8-8A0A0A6YXQ0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv8-8A0A0A6YXQ0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ighv8-8A0A0A6YXQ0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ighv8-8A0A0A6YXQ0 Gm15045-201ENSMUST00000117359 883 ntBASIC21.99■■□□□ 1.11
Ighv8-8A0A0A6YXQ0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ighv8-8A0A0A6YXQ0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv8-8A0A0A6YXQ0 Gm24109-201ENSMUST00000175489 103 ntBASIC21.9■■□□□ 1.1
Ighv8-8A0A0A6YXQ0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv8-8A0A0A6YXQ0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv8-8A0A0A6YXQ0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv8-8A0A0A6YXQ0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv8-8A0A0A6YXQ0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.49■■□□□ 1.03
Ighv8-8A0A0A6YXQ0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv8-8A0A0A6YXQ0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv8-8A0A0A6YXQ0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv8-8A0A0A6YXQ0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv8-8A0A0A6YXQ0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.35■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.35■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ighv8-8A0A0A6YXQ0 Gm23366-201ENSMUST00000175022 89 ntBASIC21.32■■□□□ 1
Ighv8-8A0A0A6YXQ0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.28■■□□□ 1
Ighv8-8A0A0A6YXQ0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv8-8A0A0A6YXQ0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv8-8A0A0A6YXQ0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv8-8A0A0A6YXQ0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv8-8A0A0A6YXQ0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv8-8A0A0A6YXQ0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv8-8A0A0A6YXQ0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv8-8A0A0A6YXQ0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.88■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-8A0A0A6YXQ0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv8-8A0A0A6YXQ0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv8-8A0A0A6YXQ0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.75■□□□□ 0.91
Ighv8-8A0A0A6YXQ0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.75■□□□□ 0.91
Ighv8-8A0A0A6YXQ0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ighv8-8A0A0A6YXQ0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv8-8A0A0A6YXQ0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ighv8-8A0A0A6YXQ0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.63■□□□□ 0.89
Ighv8-8A0A0A6YXQ0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ighv8-8A0A0A6YXQ0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv8-8A0A0A6YXQ0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ighv8-8A0A0A6YXQ0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv8-8A0A0A6YXQ0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv8-8A0A0A6YXQ0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv8-8A0A0A6YXQ0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv8-8A0A0A6YXQ0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.38■□□□□ 0.85
Ighv8-8A0A0A6YXQ0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv8-8A0A0A6YXQ0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv8-8A0A0A6YXQ0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Ighv8-8A0A0A6YXQ0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv8-8A0A0A6YXQ0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.26■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ighv8-8A0A0A6YXQ0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.2■□□□□ 0.82
Ighv8-8A0A0A6YXQ0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv8-8A0A0A6YXQ0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.16■□□□□ 0.82
Ighv8-8A0A0A6YXQ0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv8-8A0A0A6YXQ0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Ighv8-8A0A0A6YXQ0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv8-8A0A0A6YXQ0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv8-8A0A0A6YXQ0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.12■□□□□ 0.81
Ighv8-8A0A0A6YXQ0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.08■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.02■□□□□ 0.8
Ighv8-8A0A0A6YXQ0 Gm25238-201ENSMUST00000174914 89 ntBASIC19.97■□□□□ 0.79
Ighv8-8A0A0A6YXQ0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv8-8A0A0A6YXQ0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv8-8A0A0A6YXQ0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv8-8A0A0A6YXQ0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms