RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 C1orf134Q5TEV5 83 aa2.6□□□□□ -1.99
SMARCC1-206ENST00000485737 Q6ZSA8 131 aa2.6□□□□□ -1.99
SMARCC1-206ENST00000485737 STARD9Q9P2P6 4700 aa2.6□□□□□ -1.99
SMARCC1-206ENST00000485737 DNAH5Q8TE73 4624 aa2.59□□□□□ -1.99
SMARCC1-206ENST00000485737 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
SMARCC1-206ENST00000485737 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
SMARCC1-206ENST00000485737 CSMD3Q7Z407 3707 aa2.59□□□□□ -2
SMARCC1-206ENST00000485737 SACSQ9NZJ4 4579 aa2.59□□□□□ -2
SMARCC1-206ENST00000485737 COL7A1Q02388 2944 aa2.58□□□□□ -2
SMARCC1-206ENST00000485737 CSAG1Q6PB30 78 aa2.58□□□□□ -2
SMARCC1-206ENST00000485737 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
SMARCC1-206ENST00000485737 A8MUU9 505 aa2.57□□□□□ -2
SMARCC1-206ENST00000485737 SPINK1P00995 79 aa2.57□□□□□ -2
SMARCC1-206ENST00000485737 COL6A5A8TX70 2615 aa2.57□□□□□ -2
SMARCC1-206ENST00000485737 H0YAA0 97 aa2.56□□□□□ -2
SMARCC1-206ENST00000485737 FBN3Q75N90 2809 aa2.56□□□□□ -2
SMARCC1-206ENST00000485737 LRP1BQ9NZR2 4599 aa2.56□□□□□ -2
SMARCC1-206ENST00000485737 MGAM2Q2M2H8 2515 aa2.54□□□□□ -2
SMARCC1-206ENST00000485737 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
SMARCC1-206ENST00000485737 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
SMARCC1-206ENST00000485737 KRTAP10-1P60331 282 aa2.53□□□□□ -2
SMARCC1-206ENST00000485737 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
SMARCC1-206ENST00000485737 TYMSOSQ8TAI1 123 aa2.53□□□□□ -2
SMARCC1-206ENST00000485737 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
SMARCC1-206ENST00000485737 A0A1B0GU33 70 aa2.52□□□□□ -2.01
SMARCC1-206ENST00000485737 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
SMARCC1-206ENST00000485737 SEC61BP60468 96 aaKnown RBP2.51□□□□□ -2.01
SMARCC1-206ENST00000485737 PKD1P98161 4303 aa2.51□□□□□ -2.01
SMARCC1-206ENST00000485737 MEGF8Q7Z7M0 2845 aa2.5□□□□□ -2.01
SMARCC1-206ENST00000485737 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
SMARCC1-206ENST00000485737 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
SMARCC1-206ENST00000485737 K7ERS5 55 aa2.48□□□□□ -2.01
SMARCC1-206ENST00000485737 ROMO1P60602 79 aa2.48□□□□□ -2.01
SMARCC1-206ENST00000485737 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
SMARCC1-206ENST00000485737 APOBP04114 4563 aaKnown RBP2.46□□□□□ -2.02
SMARCC1-206ENST00000485737 TGP01266 2768 aa2.46□□□□□ -2.02
SMARCC1-206ENST00000485737 KRTAP10-5P60370 271 aa2.44□□□□□ -2.02
SMARCC1-206ENST00000485737 VPS13BQ7Z7G8 4022 aa2.44□□□□□ -2.02
SMARCC1-206ENST00000485737 DYNC1H1Q14204 4646 aaKnown RBP2.43□□□□□ -2.02
SMARCC1-206ENST00000485737 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
SMARCC1-206ENST00000485737 KRTAP10-4P60372 401 aaPredicted RBP2.43□□□□□ -2.02
SMARCC1-206ENST00000485737 RPL37P61927 97 aaKnown RBP2.42□□□□□ -2.02
SMARCC1-206ENST00000485737 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
SMARCC1-206ENST00000485737 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
SMARCC1-206ENST00000485737 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
SMARCC1-206ENST00000485737 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.03
SMARCC1-206ENST00000485737 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
SMARCC1-206ENST00000485737 P0C880 135 aa2.39□□□□□ -2.03
SMARCC1-206ENST00000485737 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
SMARCC1-206ENST00000485737 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
SMARCC1-206ENST00000485737 HSPG2P98160 4391 aa2.38□□□□□ -2.03
SMARCC1-206ENST00000485737 FAT1Q14517 4588 aa2.37□□□□□ -2.03
SMARCC1-206ENST00000485737 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
SMARCC1-206ENST00000485737 TNXBP22105 4242 aa2.37□□□□□ -2.03
SMARCC1-206ENST00000485737 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
SMARCC1-206ENST00000485737 DNHD1Q96M86 4753 aa2.36□□□□□ -2.03
SMARCC1-206ENST00000485737 CRIPTQ9P021 101 aa2.36□□□□□ -2.03
SMARCC1-206ENST00000485737 S4R3F8 94 aa2.36□□□□□ -2.03
SMARCC1-206ENST00000485737 SMR3BP02814 79 aaPredicted RBP2.34□□□□□ -2.03
SMARCC1-206ENST00000485737 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SMARCC1-206ENST00000485737 A0A0D9SG42 100 aa2.33□□□□□ -2.04
SMARCC1-206ENST00000485737 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
SMARCC1-206ENST00000485737 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
SMARCC1-206ENST00000485737 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
SMARCC1-206ENST00000485737 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
SMARCC1-206ENST00000485737 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
SMARCC1-206ENST00000485737 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
SMARCC1-206ENST00000485737 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
SMARCC1-206ENST00000485737 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
SMARCC1-206ENST00000485737 M0QZ58 72 aa2.3□□□□□ -2.04
SMARCC1-206ENST00000485737 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
SMARCC1-206ENST00000485737 RYR2Q92736 4967 aa2.27□□□□□ -2.05
SMARCC1-206ENST00000485737 KRTAP21-3Q3LHN1 58 aa2.26□□□□□ -2.05
SMARCC1-206ENST00000485737 MYCBP2O75592 4640 aa2.25□□□□□ -2.05
SMARCC1-206ENST00000485737 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
SMARCC1-206ENST00000485737 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
SMARCC1-206ENST00000485737 Q5VSD8 79 aa2.23□□□□□ -2.05
SMARCC1-206ENST00000485737 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
SMARCC1-206ENST00000485737 RYR1P21817 5038 aa2.21□□□□□ -2.06
SMARCC1-206ENST00000485737 DMBT1Q9UGM3 2413 aaPredicted RBP2.19□□□□□ -2.06
SMARCC1-206ENST00000485737 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
SMARCC1-206ENST00000485737 R4GN34 69 aa2.17□□□□□ -2.06
SMARCC1-206ENST00000485737 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
SMARCC1-206ENST00000485737 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
SMARCC1-206ENST00000485737 LPAP08519 4548 aa2.13□□□□□ -2.07
SMARCC1-206ENST00000485737 MUC17Q685J3 4493 aa2.13□□□□□ -2.07
SMARCC1-206ENST00000485737 LRP2P98164 4655 aa2.12□□□□□ -2.07
SMARCC1-206ENST00000485737 RYR3Q15413 4870 aa2.11□□□□□ -2.07
SMARCC1-206ENST00000485737 HERC1Q15751 4861 aa2.1□□□□□ -2.07
SMARCC1-206ENST00000485737 KRTAP19-2Q3LHN2 52 aa2.1□□□□□ -2.07
SMARCC1-206ENST00000485737 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
SMARCC1-206ENST00000485737 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
SMARCC1-206ENST00000485737 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
SMARCC1-206ENST00000485737 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
SMARCC1-206ENST00000485737 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
SMARCC1-206ENST00000485737 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
SMARCC1-206ENST00000485737 TNP1P09430 55 aa2.04□□□□□ -2.08
SMARCC1-206ENST00000485737 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
SMARCC1-206ENST00000485737 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
SMARCC1-206ENST00000485737 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms