RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
SMARCC1-206ENST00000485737 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
SMARCC1-206ENST00000485737 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
SMARCC1-206ENST00000485737 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
SMARCC1-206ENST00000485737 FOXD1Q16676 465 aa12.96□□□□□ -0.33
SMARCC1-206ENST00000485737 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
SMARCC1-206ENST00000485737 MSH5O43196 834 aa12.6□□□□□ -0.39
SMARCC1-206ENST00000485737 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
SMARCC1-206ENST00000485737 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-206ENST00000485737 ADRA2BP18089 450 aa12.05□□□□□ -0.48
SMARCC1-206ENST00000485737 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
SMARCC1-206ENST00000485737 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-206ENST00000485737 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
SMARCC1-206ENST00000485737 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
SMARCC1-206ENST00000485737 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
SMARCC1-206ENST00000485737 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-206ENST00000485737 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
SMARCC1-206ENST00000485737 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-206ENST00000485737 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-206ENST00000485737 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
SMARCC1-206ENST00000485737 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
SMARCC1-206ENST00000485737 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-206ENST00000485737 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
SMARCC1-206ENST00000485737 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-206ENST00000485737 KCNA4P22459 653 aa10.52□□□□□ -0.73
SMARCC1-206ENST00000485737 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-206ENST00000485737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.795e-10■■■□□ 17.4
SMARCC1-206ENST00000485737 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
SMARCC1-206ENST00000485737 APLP2Q06481 763 aa9.96□□□□□ -0.82
SMARCC1-206ENST00000485737 SLC4A2P04920 1241 aa9.92□□□□□ -0.82
SMARCC1-206ENST00000485737 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-206ENST00000485737 POTEHQ6S545 545 aa9.82□□□□□ -0.84
SMARCC1-206ENST00000485737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-206ENST00000485737 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
SMARCC1-206ENST00000485737 CAPN15O75808 1086 aa9.75□□□□□ -0.85
SMARCC1-206ENST00000485737 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
SMARCC1-206ENST00000485737 ZNF219Q9P2Y4 722 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-206ENST00000485737 DSG3P32926 999 aa9.71□□□□□ -0.86
SMARCC1-206ENST00000485737 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
SMARCC1-206ENST00000485737 SPINK5Q9NQ38 1064 aaPredicted RBP9.68□□□□□ -0.86
SMARCC1-206ENST00000485737 ZBTB22O15209 634 aa9.65□□□□□ -0.86
SMARCC1-206ENST00000485737 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-206ENST00000485737 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
SMARCC1-206ENST00000485737 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-206ENST00000485737 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
SMARCC1-206ENST00000485737 ABCB7O75027 752 aa9.49□□□□□ -0.89
SMARCC1-206ENST00000485737 CSRNP3Q8WYN3 585 aa9.44□□□□□ -0.9
SMARCC1-206ENST00000485737 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-206ENST00000485737 POLA2Q14181 598 aa9.37□□□□□ -0.91
SMARCC1-206ENST00000485737 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
SMARCC1-206ENST00000485737 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-206ENST00000485737 NISCHQ9Y2I1 1504 aa9.35□□□□□ -0.91
SMARCC1-206ENST00000485737 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
SMARCC1-206ENST00000485737 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
SMARCC1-206ENST00000485737 FBLN2P98095 1184 aa9.1□□□□□ -0.95
SMARCC1-206ENST00000485737 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
SMARCC1-206ENST00000485737 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-206ENST00000485737 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-206ENST00000485737 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-206ENST00000485737 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
SMARCC1-206ENST00000485737 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
SMARCC1-206ENST00000485737 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
SMARCC1-206ENST00000485737 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.98
SMARCC1-206ENST00000485737 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
SMARCC1-206ENST00000485737 HAX1O00165 279 aa8.87□□□□□ -0.99
SMARCC1-206ENST00000485737 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.992e-8■■■■□ 21
SMARCC1-206ENST00000485737 PITPNM1O00562 1244 aa8.82□□□□□ -1
SMARCC1-206ENST00000485737 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
SMARCC1-206ENST00000485737 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
SMARCC1-206ENST00000485737 SPDYE4A6NLX3 237 aa8.76□□□□□ -1.01
SMARCC1-206ENST00000485737 PABPN1Q86U42 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMARCC1-206ENST00000485737 CLCN6P51797 869 aa8.74□□□□□ -1.01
SMARCC1-206ENST00000485737 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
SMARCC1-206ENST00000485737 PRKAR2AP13861 404 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-206ENST00000485737 FKBP8Q14318 412 aa8.61□□□□□ -1.03
SMARCC1-206ENST00000485737 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
SMARCC1-206ENST00000485737 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
SMARCC1-206ENST00000485737 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
SMARCC1-206ENST00000485737 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
SMARCC1-206ENST00000485737 PROM2Q8N271 834 aa8.49□□□□□ -1.05
SMARCC1-206ENST00000485737 GABBR2O75899 941 aa8.47□□□□□ -1.05
SMARCC1-206ENST00000485737 LHX8Q68G74 356 aa8.47□□□□□ -1.05
SMARCC1-206ENST00000485737 EVX2Q03828 476 aa8.42□□□□□ -1.06
SMARCC1-206ENST00000485737 CREBZFQ9NS37 354 aa8.4□□□□□ -1.06
SMARCC1-206ENST00000485737 PLSCR2Q9NRY7 297 aa8.39□□□□□ -1.07
SMARCC1-206ENST00000485737 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-206ENST00000485737 CD44P16070 742 aaKnown RBP8.37□□□□□ -1.07
SMARCC1-206ENST00000485737 MIER1Q8N108 512 aa8.35□□□□□ -1.07
SMARCC1-206ENST00000485737 PAK3O75914 559 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-206ENST00000485737 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
SMARCC1-206ENST00000485737 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
SMARCC1-206ENST00000485737 PLCD3Q8N3E9 789 aa8.33□□□□□ -1.08
SMARCC1-206ENST00000485737 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
SMARCC1-206ENST00000485737 ZNF579Q8NAF0 562 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-206ENST00000485737 NPM1P06748 294 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMARCC1-206ENST00000485737 MNX1P50219 401 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-206ENST00000485737 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
SMARCC1-206ENST00000485737 ZRANB1Q9UGI0 708 aa8.22□□□□□ -1.09
SMARCC1-206ENST00000485737 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
SMARCC1-206ENST00000485737 ZBTB47Q9UFB7 747 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms