RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 NSD1Q96L73 2696 aaPredicted RBP3.2□□□□□ -1.9
SREK1-203ENST00000380918 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
SREK1-203ENST00000380918 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
SREK1-203ENST00000380918 DNAH7Q8WXX0 4024 aa3.18□□□□□ -1.9
SREK1-203ENST00000380918 HUWE1Q7Z6Z7 4374 aaKnown RBP3.17□□□□□ -1.9
SREK1-203ENST00000380918 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
SREK1-203ENST00000380918 Q6ZRN7 208 aaPredicted RBP3.17□□□□□ -1.9
SREK1-203ENST00000380918 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
SREK1-203ENST00000380918 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
SREK1-203ENST00000380918 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
SREK1-203ENST00000380918 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
SREK1-203ENST00000380918 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
SREK1-203ENST00000380918 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
SREK1-203ENST00000380918 A0A0D9SG42 100 aa3.13□□□□□ -1.91
SREK1-203ENST00000380918 KRTAP19-1Q8IUB9 90 aa3.13□□□□□ -1.91
SREK1-203ENST00000380918 APLNQ9ULZ1 77 aa3.13□□□□□ -1.91
SREK1-203ENST00000380918 KMT2AQ03164 3969 aa3.13□□□□□ -1.91
SREK1-203ENST00000380918 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
SREK1-203ENST00000380918 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
SREK1-203ENST00000380918 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
SREK1-203ENST00000380918 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
SREK1-203ENST00000380918 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
SREK1-203ENST00000380918 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
SREK1-203ENST00000380918 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
SREK1-203ENST00000380918 STAB1Q9NY15 2570 aa3.08□□□□□ -1.92
SREK1-203ENST00000380918 KRTAP10-6P60371 365 aaPredicted RBP3.07□□□□□ -1.92
SREK1-203ENST00000380918 DYNC2H1Q8NCM8 4307 aaKnown RBP3.06□□□□□ -1.92
SREK1-203ENST00000380918 S4R3F8 94 aa3.05□□□□□ -1.92
SREK1-203ENST00000380918 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
SREK1-203ENST00000380918 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
SREK1-203ENST00000380918 DNAH2Q9P225 4427 aa3.03□□□□□ -1.92
SREK1-203ENST00000380918 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
SREK1-203ENST00000380918 PRKDCP78527 4128 aaKnown RBP3.02□□□□□ -1.93
SREK1-203ENST00000380918 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
SREK1-203ENST00000380918 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
SREK1-203ENST00000380918 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
SREK1-203ENST00000380918 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
SREK1-203ENST00000380918 STARD9Q9P2P6 4700 aa2.99□□□□□ -1.93
SREK1-203ENST00000380918 DNHD1Q96M86 4753 aa2.98□□□□□ -1.93
SREK1-203ENST00000380918 INE1O15225 51 aa2.98□□□□□ -1.93
SREK1-203ENST00000380918 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
SREK1-203ENST00000380918 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
SREK1-203ENST00000380918 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
SREK1-203ENST00000380918 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
SREK1-203ENST00000380918 KRTAP21-3Q3LHN1 58 aa2.93□□□□□ -1.94
SREK1-203ENST00000380918 RPS29P62273 56 aaKnown RBP2.91□□□□□ -1.94
SREK1-203ENST00000380918 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
SREK1-203ENST00000380918 MT3P25713 68 aa2.9□□□□□ -1.95
SREK1-203ENST00000380918 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
SREK1-203ENST00000380918 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
SREK1-203ENST00000380918 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
SREK1-203ENST00000380918 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
SREK1-203ENST00000380918 PKD1P98161 4303 aa2.84□□□□□ -1.95
SREK1-203ENST00000380918 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.96
SREK1-203ENST00000380918 M0QZ58 72 aa2.82□□□□□ -1.96
SREK1-203ENST00000380918 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
SREK1-203ENST00000380918 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
SREK1-203ENST00000380918 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SREK1-203ENST00000380918 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
SREK1-203ENST00000380918 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
SREK1-203ENST00000380918 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
SREK1-203ENST00000380918 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SREK1-203ENST00000380918 HSPG2P98160 4391 aa2.74□□□□□ -1.97
SREK1-203ENST00000380918 SMR3BP02814 79 aaPredicted RBP2.74□□□□□ -1.97
SREK1-203ENST00000380918 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
SREK1-203ENST00000380918 TNXBP22105 4242 aa2.71□□□□□ -1.98
SREK1-203ENST00000380918 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
SREK1-203ENST00000380918 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
SREK1-203ENST00000380918 FAT1Q14517 4588 aa2.69□□□□□ -1.98
SREK1-203ENST00000380918 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
SREK1-203ENST00000380918 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
SREK1-203ENST00000380918 LPAP08519 4548 aa2.66□□□□□ -1.98
SREK1-203ENST00000380918 A0A1B0GVY2 172 aa2.63□□□□□ -1.99
SREK1-203ENST00000380918 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
SREK1-203ENST00000380918 RYR3Q15413 4870 aa2.6□□□□□ -1.99
SREK1-203ENST00000380918 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
SREK1-203ENST00000380918 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
SREK1-203ENST00000380918 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
SREK1-203ENST00000380918 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
SREK1-203ENST00000380918 RYR2Q92736 4967 aa2.56□□□□□ -2
SREK1-203ENST00000380918 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SREK1-203ENST00000380918 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
SREK1-203ENST00000380918 TNP1P09430 55 aa2.54□□□□□ -2
SREK1-203ENST00000380918 LRP2P98164 4655 aa2.53□□□□□ -2
SREK1-203ENST00000380918 RYR1P21817 5038 aa2.53□□□□□ -2
SREK1-203ENST00000380918 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
SREK1-203ENST00000380918 EPPK1P58107 5090 aaKnown RBP2.52□□□□□ -2.01
SREK1-203ENST00000380918 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
SREK1-203ENST00000380918 Q5VSD8 79 aa2.48□□□□□ -2.01
SREK1-203ENST00000380918 MT1HL1P0DM35 61 aa2.42□□□□□ -2.02
SREK1-203ENST00000380918 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
SREK1-203ENST00000380918 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
SREK1-203ENST00000380918 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
SREK1-203ENST00000380918 HERC2O95714 4834 aa2.41□□□□□ -2.02
SREK1-203ENST00000380918 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
SREK1-203ENST00000380918 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
SREK1-203ENST00000380918 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
SREK1-203ENST00000380918 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
SREK1-203ENST00000380918 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SREK1-203ENST00000380918 KRTAP10-5P60370 271 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms