RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.12
SREK1-203ENST00000380918 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
SREK1-203ENST00000380918 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
SREK1-203ENST00000380918 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
SREK1-203ENST00000380918 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.32
SREK1-203ENST00000380918 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
SREK1-203ENST00000380918 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
SREK1-203ENST00000380918 KCNA4P22459 653 aa12.39□□□□□ -0.43
SREK1-203ENST00000380918 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
SREK1-203ENST00000380918 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
SREK1-203ENST00000380918 NCBP3Q53F19 620 aaKnown RBP11.92□□□□□ -0.5
SREK1-203ENST00000380918 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
SREK1-203ENST00000380918 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
SREK1-203ENST00000380918 ADRA2BP18089 450 aa11.77□□□□□ -0.52
SREK1-203ENST00000380918 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
SREK1-203ENST00000380918 ZBTB22O15209 634 aa11.55□□□□□ -0.56
SREK1-203ENST00000380918 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
SREK1-203ENST00000380918 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
SREK1-203ENST00000380918 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
SREK1-203ENST00000380918 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
SREK1-203ENST00000380918 ARXQ96QS3 562 aa11.22□□□□□ -0.61
SREK1-203ENST00000380918 BCANQ96GW7 911 aa11.21□□□□□ -0.61
SREK1-203ENST00000380918 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
SREK1-203ENST00000380918 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
SREK1-203ENST00000380918 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
SREK1-203ENST00000380918 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
SREK1-203ENST00000380918 FKBP8Q14318 412 aa11.08□□□□□ -0.64
SREK1-203ENST00000380918 SENP3Q9H4L4 574 aaPredicted RBP11.03□□□□□ -0.64
SREK1-203ENST00000380918 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.66
SREK1-203ENST00000380918 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
SREK1-203ENST00000380918 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
SREK1-203ENST00000380918 KDM2AQ9Y2K7 1162 aa10.84□□□□□ -0.67
SREK1-203ENST00000380918 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
SREK1-203ENST00000380918 FBLN2P98095 1184 aa10.8□□□□□ -0.68
SREK1-203ENST00000380918 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
SREK1-203ENST00000380918 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
SREK1-203ENST00000380918 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
SREK1-203ENST00000380918 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
SREK1-203ENST00000380918 DCAF8L2P0C7V8 631 aa10.68□□□□□ -0.7
SREK1-203ENST00000380918 APLP2Q06481 763 aa10.68□□□□□ -0.7
SREK1-203ENST00000380918 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
SREK1-203ENST00000380918 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
SREK1-203ENST00000380918 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
SREK1-203ENST00000380918 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
SREK1-203ENST00000380918 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
SREK1-203ENST00000380918 UBTFP17480 764 aaKnown RBP10.41□□□□□ -0.74
SREK1-203ENST00000380918 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
SREK1-203ENST00000380918 FOXD1Q16676 465 aa10.37□□□□□ -0.75
SREK1-203ENST00000380918 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
SREK1-203ENST00000380918 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
SREK1-203ENST00000380918 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
SREK1-203ENST00000380918 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
SREK1-203ENST00000380918 HRCP23327 699 aa10.32□□□□□ -0.76
SREK1-203ENST00000380918 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
SREK1-203ENST00000380918 PKD2Q13563 968 aa10.3□□□□□ -0.76
SREK1-203ENST00000380918 NBR1Q14596 966 aa10.24□□□□□ -0.77
SREK1-203ENST00000380918 CNKSR2Q8WXI2 1034 aa10.22□□□□□ -0.77
SREK1-203ENST00000380918 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
SREK1-203ENST00000380918 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
SREK1-203ENST00000380918 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
SREK1-203ENST00000380918 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
SREK1-203ENST00000380918 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.79
SREK1-203ENST00000380918 LOC105371045A0A1W2PR82 267 aa10.14□□□□□ -0.79
SREK1-203ENST00000380918 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
SREK1-203ENST00000380918 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
SREK1-203ENST00000380918 SLC4A2P04920 1241 aa10.12□□□□□ -0.79
SREK1-203ENST00000380918 EIF5BO60841 1220 aaKnown RBP10.1□□□□□ -0.79
SREK1-203ENST00000380918 MYT1Q01538 1121 aa10.06□□□□□ -0.8
SREK1-203ENST00000380918 PIAS4Q8N2W9 510 aaPredicted RBP10.05□□□□□ -0.8
SREK1-203ENST00000380918 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
SREK1-203ENST00000380918 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
SREK1-203ENST00000380918 SPRYD3Q8NCJ5 442 aa10.01□□□□□ -0.81
SREK1-203ENST00000380918 DNAJC5BQ9UF47 199 aa9.99□□□□□ -0.81
SREK1-203ENST00000380918 ARID3AQ99856 593 aa9.97□□□□□ -0.81
SREK1-203ENST00000380918 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
SREK1-203ENST00000380918 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
SREK1-203ENST00000380918 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
SREK1-203ENST00000380918 BRPF1P55201 1214 aaPredicted RBP9.94□□□□□ -0.82
SREK1-203ENST00000380918 RGL2O15211 777 aa9.91□□□□□ -0.82
SREK1-203ENST00000380918 MYCNP04198 464 aaPredicted RBP9.88□□□□□ -0.83
SREK1-203ENST00000380918 ECM2O94769 699 aaPredicted RBP9.87□□□□□ -0.83
SREK1-203ENST00000380918 IGSF3O75054 1194 aa9.86□□□□□ -0.83
SREK1-203ENST00000380918 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
SREK1-203ENST00000380918 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
SREK1-203ENST00000380918 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
SREK1-203ENST00000380918 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
SREK1-203ENST00000380918 CHGAP10645 457 aaKnown RBP9.77□□□□□ -0.84
SREK1-203ENST00000380918 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
SREK1-203ENST00000380918 ARID3CA6NKF2 412 aa9.73□□□□□ -0.85
SREK1-203ENST00000380918 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
SREK1-203ENST00000380918 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
SREK1-203ENST00000380918 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
SREK1-203ENST00000380918 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
SREK1-203ENST00000380918 PCGF6Q9BYE7 350 aa9.68□□□□□ -0.86
SREK1-203ENST00000380918 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
SREK1-203ENST00000380918 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
SREK1-203ENST00000380918 PROM2Q8N271 834 aa9.65□□□□□ -0.86
SREK1-203ENST00000380918 ZNF428Q96B54 188 aa9.65□□□□□ -0.86
SREK1-203ENST00000380918 ZBTB7CA1YPR0 619 aa9.64□□□□□ -0.87
SREK1-203ENST00000380918 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms