RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 KIAA0586Q9BVV6 1533 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 HSPG2P98160 4391 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 IQGAP3Q86VI3 1631 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 BOD1L1Q8NFC6 3051 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 CEP295Q9C0D2 2601 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 CEP350Q5VT06 3117 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 NBEAQ8NFP9 2946 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 CD163L1Q9NR16 1453 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 TLN1Q9Y490 2541 aaKnown RBP0.05□□□□□ -2.4
PCNX4-206ENST00000553513 SERF2P84101 59 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 KRTAP19-6Q3LI70 58 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 GNG13Q9P2W3 67 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 LAMA2P24043 3122 aaKnown RBP0.05□□□□□ -2.4
PCNX4-206ENST00000553513 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 DNHD1Q96M86 4753 aa0.05□□□□□ -2.4
PCNX4-206ENST00000553513 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
PCNX4-206ENST00000553513 SRRM2Q9UQ35 2752 aaKnown RBP0.05□□□□□ -2.4
PCNX4-206ENST00000553513 VPS13BQ7Z7G8 4022 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 ACACAQ13085 2346 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 CDC42BPGQ6DT37 1551 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 EP400Q96L91 3159 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 ETDCA0A1B0GVM5 59 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 K7EMI3 77 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 MT4P47944 62 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 DEFA5Q01523 94 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 SVEP1Q4LDE5 3571 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 ABCA9Q8IUA7 1624 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 CSMD1Q96PZ7 3565 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 SPEGQ15772 3267 aa0.04□□□□□ -2.4
PCNX4-206ENST00000553513 PCNTO95613 3336 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 DNAH12Q6ZR08 3092 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 DNMBPQ6XZF7 1577 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 CCDC180Q9P1Z9 1646 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 KIF1AQ12756 1690 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 H3BUA1 57 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 IAPPP10997 89 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 SPRR2AP35326 72 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 PRLHP81277 87 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 ENHOQ6UWT2 76 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 TIMM8BQ9Y5J9 83 aaPredicted RBP0.03□□□□□ -2.4
PCNX4-206ENST00000553513 SZT2Q5T011 3432 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 DMXL1Q9Y485 3027 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 LAMA1P25391 3075 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 A0A1B0GUL6 1792 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 ITPR2Q14571 2701 aa0.03□□□□□ -2.4
PCNX4-206ENST00000553513 LRP2P98164 4655 aa0.03□□□□□ -2.41
PCNX4-206ENST00000553513 EFCAB5A4FU69 1503 aa0.03□□□□□ -2.41
PCNX4-206ENST00000553513 CFAP47Q6ZTR5 3102 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 LY75O60449 1722 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 TACC2O95359 2948 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 H0YAA0 97 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 NCBP2-AS2Q69YL0 99 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 VCANP13611 3396 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 DNAH3Q8TD57 4116 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 ASXL1Q8IXJ9 1541 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 DIP2AQ14689 1571 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 UNC80Q8N2C7 3258 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 ITSN2Q9NZM3 1697 aa0.02□□□□□ -2.41
PCNX4-206ENST00000553513 CDC42BPAQ5VT25 1732 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 CUBNO60494 3623 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
PCNX4-206ENST00000553513 A0A087WWC5 75 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 DEFB130BP0DP73 79 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 DEFB130AP0DP74 79 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 SPRR2EP22531 72 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 MINOS1Q5TGZ0 78 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 NMES1Q9C002 83 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 PKD1P98161 4303 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 DCHS1Q96JQ0 3298 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 TOGARAM1Q9Y4F4 1720 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 CEP250Q9BV73 2442 aa0.01□□□□□ -2.41
PCNX4-206ENST00000553513 LRBAP50851 2863 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 H3BNG1 76 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 CROCC2H7BZ55 1655 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 ABCC6O95255 1503 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 MKI67P46013 3256 aaKnown RBP0□□□□□ -2.41
PCNX4-206ENST00000553513 RANBP2P49792 3224 aaKnown RBP0□□□□□ -2.41
PCNX4-206ENST00000553513 CRIP1P50238 77 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 WT1-ASQ06250 92 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 EYSQ5T1H1 3165 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 SMIM5Q71RC9 77 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 ALS2Q96Q42 1657 aa0□□□□□ -2.41
PCNX4-206ENST00000553513 NOP10Q9NPE3 64 aaKnown RBP0□□□□□ -2.41
PCNX4-206ENST00000553513 HTTP42858 3142 aa-0□□□□□ -2.41
PCNX4-206ENST00000553513 LAMA5O15230 3695 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 ABCA6Q8N139 1617 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 TIAM1Q13009 1591 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 ABCA10Q8WWZ4 1543 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 S100ZQ8WXG8 99 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 C6orf48Q9UBA6 75 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 HILPDAQ9Y5L2 63 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 RELNP78509 3460 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 DNAH9Q9NYC9 4486 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 C5orf42Q9H799 3197 aa-0.01□□□□□ -2.41
PCNX4-206ENST00000553513 NIPBLQ6KC79 2804 aaeCLIP-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms