RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
PCNX4-206ENST00000553513 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
PCNX4-206ENST00000553513 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
PCNX4-206ENST00000553513 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
PCNX4-206ENST00000553513 FOXD1Q16676 465 aa16.65■□□□□ 0.26
PCNX4-206ENST00000553513 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
PCNX4-206ENST00000553513 ADRA2BP18089 450 aa15.86■□□□□ 0.13
PCNX4-206ENST00000553513 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
PCNX4-206ENST00000553513 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
PCNX4-206ENST00000553513 MSH5O43196 834 aa15.47■□□□□ 0.07
PCNX4-206ENST00000553513 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
PCNX4-206ENST00000553513 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
PCNX4-206ENST00000553513 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
PCNX4-206ENST00000553513 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
PCNX4-206ENST00000553513 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
PCNX4-206ENST00000553513 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
PCNX4-206ENST00000553513 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
PCNX4-206ENST00000553513 KCNA4P22459 653 aa14.01□□□□□ -0.17
PCNX4-206ENST00000553513 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-206ENST00000553513 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
PCNX4-206ENST00000553513 NPM3O75607 178 aaKnown RBP13.91□□□□□ -0.18
PCNX4-206ENST00000553513 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
PCNX4-206ENST00000553513 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
PCNX4-206ENST00000553513 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
PCNX4-206ENST00000553513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCNX4-206ENST00000553513 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
PCNX4-206ENST00000553513 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
PCNX4-206ENST00000553513 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
PCNX4-206ENST00000553513 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
PCNX4-206ENST00000553513 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
PCNX4-206ENST00000553513 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
PCNX4-206ENST00000553513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-206ENST00000553513 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-206ENST00000553513 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
PCNX4-206ENST00000553513 ZBTB22O15209 634 aa12.87□□□□□ -0.35
PCNX4-206ENST00000553513 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-206ENST00000553513 APLP2Q06481 763 aa12.81□□□□□ -0.36
PCNX4-206ENST00000553513 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
PCNX4-206ENST00000553513 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
PCNX4-206ENST00000553513 CAPN15O75808 1086 aa12.7□□□□□ -0.38
PCNX4-206ENST00000553513 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
PCNX4-206ENST00000553513 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
PCNX4-206ENST00000553513 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
PCNX4-206ENST00000553513 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
PCNX4-206ENST00000553513 DSG3P32926 999 aa12.51□□□□□ -0.41
PCNX4-206ENST00000553513 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
PCNX4-206ENST00000553513 ABCB7O75027 752 aa12.42□□□□□ -0.42
PCNX4-206ENST00000553513 POLA2Q14181 598 aa12.35□□□□□ -0.43
PCNX4-206ENST00000553513 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
PCNX4-206ENST00000553513 FBLN2P98095 1184 aa12.06□□□□□ -0.48
PCNX4-206ENST00000553513 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
PCNX4-206ENST00000553513 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-206ENST00000553513 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
PCNX4-206ENST00000553513 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
PCNX4-206ENST00000553513 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
PCNX4-206ENST00000553513 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
PCNX4-206ENST00000553513 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
PCNX4-206ENST00000553513 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
PCNX4-206ENST00000553513 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
PCNX4-206ENST00000553513 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
PCNX4-206ENST00000553513 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
PCNX4-206ENST00000553513 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCNX4-206ENST00000553513 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
PCNX4-206ENST00000553513 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
PCNX4-206ENST00000553513 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
PCNX4-206ENST00000553513 FKBP8Q14318 412 aa11.49□□□□□ -0.57
PCNX4-206ENST00000553513 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
PCNX4-206ENST00000553513 PROM2Q8N271 834 aa11.42□□□□□ -0.58
PCNX4-206ENST00000553513 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
PCNX4-206ENST00000553513 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
PCNX4-206ENST00000553513 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCNX4-206ENST00000553513 POTEHQ6S545 545 aa11.32□□□□□ -0.6
PCNX4-206ENST00000553513 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
PCNX4-206ENST00000553513 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
PCNX4-206ENST00000553513 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
PCNX4-206ENST00000553513 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
PCNX4-206ENST00000553513 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
PCNX4-206ENST00000553513 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
PCNX4-206ENST00000553513 MIER1Q8N108 512 aa11.07□□□□□ -0.64
PCNX4-206ENST00000553513 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
PCNX4-206ENST00000553513 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
PCNX4-206ENST00000553513 HAX1O00165 279 aa11.01□□□□□ -0.65
PCNX4-206ENST00000553513 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
PCNX4-206ENST00000553513 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
PCNX4-206ENST00000553513 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
PCNX4-206ENST00000553513 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
PCNX4-206ENST00000553513 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
PCNX4-206ENST00000553513 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
PCNX4-206ENST00000553513 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
PCNX4-206ENST00000553513 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
PCNX4-206ENST00000553513 EVX2Q03828 476 aa10.84□□□□□ -0.67
PCNX4-206ENST00000553513 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
PCNX4-206ENST00000553513 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
PCNX4-206ENST00000553513 ZRANB1Q9UGI0 708 aa10.81□□□□□ -0.68
PCNX4-206ENST00000553513 NUBP1P53384 320 aa10.77□□□□□ -0.69
PCNX4-206ENST00000553513 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
PCNX4-206ENST00000553513 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
PCNX4-206ENST00000553513 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
PCNX4-206ENST00000553513 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
PCNX4-206ENST00000553513 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms