RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W YRF1-2P40105 1681 aa2.75□□□□□ -1.97
SKI3YPR189W DNF3Q12674 1656 aa2.75□□□□□ -1.97
SKI3YPR189W RIM101P33400 625 aa2.74□□□□□ -1.97
SKI3YPR189W TY2B-BQ12491 1770 aa2.73□□□□□ -1.97
SKI3YPR189W VPS15P22219 1454 aa2.73□□□□□ -1.97
SKI3YPR189W DMA2P53924 522 aa2.72□□□□□ -1.97
SKI3YPR189W HAP1P0CE41 1502 aa2.72□□□□□ -1.97
SKI3YPR189W ITT1Q04638 464 aa2.71□□□□□ -1.97
SKI3YPR189W SPT21P35209 758 aa2.7□□□□□ -1.98
SKI3YPR189W CHC1P22137 1653 aaKnown RBP2.7□□□□□ -1.98
SKI3YPR189W SPB4P25808 606 aaPredicted RBP2.7□□□□□ -1.98
SKI3YPR189W RPN1P38764 993 aaKnown RBP2.7□□□□□ -1.98
SKI3YPR189W TY1B-JR2P47100 1755 aaKnown RBP2.69□□□□□ -1.98
SKI3YPR189W TY1B-ER2Q03619 1755 aa2.69□□□□□ -1.98
SKI3YPR189W TY1B-MR1Q04214 1755 aa2.69□□□□□ -1.98
SKI3YPR189W TY1B-MR2Q04670 1755 aaKnown RBP2.69□□□□□ -1.98
SKI3YPR189W TY1B-LR1Q12088 1755 aaKnown RBP2.69□□□□□ -1.98
SKI3YPR189W TY1B-NL1Q12112 1755 aa2.69□□□□□ -1.98
SKI3YPR189W TY1B-GR1Q12141 1755 aa2.69□□□□□ -1.98
SKI3YPR189W TY1B-BLQ12490 1755 aa2.69□□□□□ -1.98
SKI3YPR189W SNF2P22082 1703 aa2.68□□□□□ -1.98
SKI3YPR189W PRI1P10363 409 aa2.68□□□□□ -1.98
SKI3YPR189W OXP1P28273 1286 aa2.68□□□□□ -1.98
SKI3YPR189W SAS10Q12136 610 aaPredicted RBP2.68□□□□□ -1.98
SKI3YPR189W XRN1P22147 1528 aaKnown RBP2.68□□□□□ -1.98
SKI3YPR189W TY1B-DR3Q99231 1755 aa2.68□□□□□ -1.98
SKI3YPR189W MGA2P40578 1113 aa2.67□□□□□ -1.98
SKI3YPR189W PRY3P47033 881 aa2.67□□□□□ -1.98
SKI3YPR189W YLR271WQ06152 274 aa2.67□□□□□ -1.98
SKI3YPR189W TAF2P23255 1407 aa2.67□□□□□ -1.98
SKI3YPR189W ABP1P15891 592 aaKnown RBP2.67□□□□□ -1.98
SKI3YPR189W AAD16Q02895 342 aa2.67□□□□□ -1.98
SKI3YPR189W CHD1P32657 1468 aa2.67□□□□□ -1.98
SKI3YPR189W TSR3Q12094 313 aaKnown RBP2.65□□□□□ -1.98
SKI3YPR189W ARO1P08566 1588 aaKnown RBP2.65□□□□□ -1.98
SKI3YPR189W YPK9Q12697 1472 aa2.65□□□□□ -1.99
SKI3YPR189W TRM732Q03496 1420 aa2.65□□□□□ -1.99
SKI3YPR189W RSM7P47150 247 aa2.65□□□□□ -1.99
SKI3YPR189W USO1P25386 1790 aa2.64□□□□□ -1.99
SKI3YPR189W RLF2Q12495 606 aa2.64□□□□□ -1.99
SKI3YPR189W VPS70P47161 811 aa2.64□□□□□ -1.99
SKI3YPR189W PAN1P32521 1480 aa2.63□□□□□ -1.99
SKI3YPR189W TY1B-NL2Q99337 1749 aaKnown RBP2.63□□□□□ -1.99
SKI3YPR189W GDB1Q06625 1536 aa2.63□□□□□ -1.99
SKI3YPR189W CST9Q06032 482 aa2.62□□□□□ -1.99
SKI3YPR189W HGH1P48362 394 aaKnown RBP2.62□□□□□ -1.99
SKI3YPR189W DRS2P39524 1355 aa2.61□□□□□ -1.99
SKI3YPR189W CKB1P43639 278 aa2.61□□□□□ -1.99
SKI3YPR189W TRM3Q07527 1436 aa2.6□□□□□ -1.99
SKI3YPR189W IML1P47170 1584 aa2.6□□□□□ -1.99
SKI3YPR189W HOP09932 586 aa2.59□□□□□ -1.99
SKI3YPR189W SET1P38827 1080 aaKnown RBP2.59□□□□□ -1.99
SKI3YPR189W NUP170P38181 1502 aa2.59□□□□□ -2
SKI3YPR189W TY3B-GQ99315 1547 aa2.58□□□□□ -2
SKI3YPR189W BBC1P47068 1157 aa2.58□□□□□ -2
SKI3YPR189W BCK1Q01389 1478 aa2.57□□□□□ -2
SKI3YPR189W AI2P03876 854 aa2.57□□□□□ -2
SKI3YPR189W IFH1P39520 1085 aa2.57□□□□□ -2
SKI3YPR189W MRPL32P25348 183 aa2.57□□□□□ -2
SKI3YPR189W KIN1P13185 1064 aa2.56□□□□□ -2
SKI3YPR189W ULS1Q08562 1619 aa2.56□□□□□ -2
SKI3YPR189W YKR023WP36119 530 aaKnown RBP2.56□□□□□ -2
SKI3YPR189W DCD1P06773 312 aa2.55□□□□□ -2
SKI3YPR189W RAM2P29703 316 aa2.55□□□□□ -2
SKI3YPR189W UFD4P33202 1483 aa2.55□□□□□ -2
SKI3YPR189W GLC3P32775 704 aa2.55□□□□□ -2
SKI3YPR189W AIM44Q99299 758 aa2.55□□□□□ -2
SKI3YPR189W SCC2Q04002 1493 aa2.55□□□□□ -2
SKI3YPR189W PSD2P53037 1138 aaKnown RBP2.54□□□□□ -2
SKI3YPR189W MRM1P25270 412 aa2.54□□□□□ -2
SKI3YPR189W PBS2P08018 668 aa2.54□□□□□ -2
SKI3YPR189W TFC8Q12308 588 aa2.53□□□□□ -2
SKI3YPR189W ATF2P53296 535 aa2.53□□□□□ -2
SKI3YPR189W YNR021WP53723 404 aaKnown RBP2.53□□□□□ -2.01
SKI3YPR189W GLN1P32288 370 aaKnown RBP2.52□□□□□ -2.01
SKI3YPR189W IES2P40154 320 aa2.52□□□□□ -2.01
SKI3YPR189W MAM3Q12296 706 aa2.52□□□□□ -2.01
SKI3YPR189W SNT2P53127 1403 aa2.52□□□□□ -2.01
SKI3YPR189W MMS22Q06164 1454 aa2.52□□□□□ -2.01
SKI3YPR189W DSF2P38213 736 aa2.51□□□□□ -2.01
SKI3YPR189W YPR148CQ06523 435 aa2.51□□□□□ -2.01
SKI3YPR189W RCR1P38212 213 aa2.5□□□□□ -2.01
SKI3YPR189W PDR12Q02785 1511 aa2.5□□□□□ -2.01
SKI3YPR189W RRD1P40454 393 aaKnown RBP2.49□□□□□ -2.01
SKI3YPR189W RPL34BP40525 121 aaKnown RBP2.49□□□□□ -2.01
SKI3YPR189W YML020WQ03722 664 aa2.49□□□□□ -2.01
SKI3YPR189W RTG3P38165 486 aa2.49□□□□□ -2.01
SKI3YPR189W REF2P42073 533 aaPredicted RBP2.48□□□□□ -2.01
SKI3YPR189W AIM7Q12156 149 aa2.48□□□□□ -2.01
SKI3YPR189W BRL1P38770 471 aa2.48□□□□□ -2.01
SKI3YPR189W MAK11P20484 414 aaKnown RBP2.48□□□□□ -2.01
SKI3YPR189W BCH2P36122 765 aa2.48□□□□□ -2.01
SKI3YPR189W MAK21Q12176 1025 aaKnown RBP2.48□□□□□ -2.01
SKI3YPR189W SSA1P10591 642 aaKnown RBP2.47□□□□□ -2.01
SKI3YPR189W COQ8P27697 501 aa2.47□□□□□ -2.01
SKI3YPR189W GUA1P38625 525 aaKnown RBP2.47□□□□□ -2.01
SKI3YPR189W EPS1P40557 701 aa2.47□□□□□ -2.01
SKI3YPR189W DIT2P21595 489 aa2.47□□□□□ -2.01
SKI3YPR189W CDC27P38042 758 aa2.46□□□□□ -2.02
SKI3YPR189W GCN2P15442 1659 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms