RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W EAP1P36041 632 aaKnown RBP9.44□□□□□ -0.9
HFI1YPL254W TIF11P38912 153 aaKnown RBP9.44□□□□□ -0.9
HFI1YPL254W PBS2P08018 668 aa9.42□□□□□ -0.9
HFI1YPL254W SOL3P38858 249 aa9.41□□□□□ -0.9
HFI1YPL254W ULI1P43604 169 aa9.41□□□□□ -0.9
HFI1YPL254W YGR273CP53329 174 aa9.41□□□□□ -0.9
HFI1YPL254W TRP5P00931 707 aaKnown RBP9.4□□□□□ -0.9
HFI1YPL254W VHR2P40041 505 aa9.4□□□□□ -0.91
HFI1YPL254W LEU3P08638 886 aa9.38□□□□□ -0.91
HFI1YPL254W YEL023CP39992 682 aa9.36□□□□□ -0.91
HFI1YPL254W UBP14P38237 781 aaKnown RBP9.35□□□□□ -0.91
HFI1YPL254W NST1P53935 1240 aa9.35□□□□□ -0.91
HFI1YPL254W DSF2P38213 736 aa9.34□□□□□ -0.91
HFI1YPL254W YLR326WQ06170 240 aaKnown RBP9.34□□□□□ -0.91
HFI1YPL254W IOC2Q12072 812 aa9.34□□□□□ -0.91
HFI1YPL254W KEX1P09620 729 aa9.31□□□□□ -0.92
HFI1YPL254W COX6P00427 148 aa9.3□□□□□ -0.92
HFI1YPL254W PTC4P38089 393 aa9.3□□□□□ -0.92
HFI1YPL254W MAK21Q12176 1025 aaKnown RBP9.3□□□□□ -0.92
HFI1YPL254W MAM3Q12296 706 aa9.3□□□□□ -0.92
HFI1YPL254W LDB19Q12502 818 aa9.3□□□□□ -0.92
HFI1YPL254W YDR090CQ03193 310 aa9.29□□□□□ -0.92
HFI1YPL254W MPH3P0CE00 602 aa9.28□□□□□ -0.92
HFI1YPL254W AI4P03878 556 aa9.28□□□□□ -0.92
HFI1YPL254W KIC1P38692 1080 aa9.28□□□□□ -0.92
HFI1YPL254W JIP4Q03361 876 aa9.28□□□□□ -0.92
HFI1YPL254W ILV3P39522 585 aaKnown RBP9.27□□□□□ -0.93
HFI1YPL254W RAD54P32863 898 aa9.26□□□□□ -0.93
HFI1YPL254W PCS60P38137 543 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
HFI1YPL254W YNL035CP53962 389 aaKnown RBP9.25□□□□□ -0.93
HFI1YPL254W RTG1P32607 177 aa9.24□□□□□ -0.93
HFI1YPL254W IES2P40154 320 aa9.24□□□□□ -0.93
HFI1YPL254W DAN4P47179 1161 aa9.24□□□□□ -0.93
HFI1YPL254W LEO1P38439 464 aa9.22□□□□□ -0.93
HFI1YPL254W SGS1P35187 1447 aa9.18□□□□□ -0.94
HFI1YPL254W SEC61P32915 480 aa9.18□□□□□ -0.94
HFI1YPL254W DIT2P21595 489 aa9.17□□□□□ -0.94
HFI1YPL254W SLI15P38283 698 aa9.17□□□□□ -0.94
HFI1YPL254W RPN1P38764 993 aaKnown RBP9.17□□□□□ -0.94
HFI1YPL254W NUP42P49686 430 aaKnown RBP9.17□□□□□ -0.94
HFI1YPL254W PML39Q03760 334 aa9.15□□□□□ -0.94
HFI1YPL254W NCR1Q12200 1170 aa9.15□□□□□ -0.94
HFI1YPL254W SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.95
HFI1YPL254W TFG1P41895 735 aaPredicted RBP9.14□□□□□ -0.95
HFI1YPL254W FKH1P40466 484 aa9.13□□□□□ -0.95
HFI1YPL254W MID1P41821 548 aa9.13□□□□□ -0.95
HFI1YPL254W YNR021WP53723 404 aaKnown RBP9.13□□□□□ -0.95
HFI1YPL254W GLC3P32775 704 aa9.09□□□□□ -0.95
HFI1YPL254W ORC6P38826 435 aa9.08□□□□□ -0.96
HFI1YPL254W CDC73Q06697 393 aa9.08□□□□□ -0.96
HFI1YPL254W AIR2Q12476 344 aaKnown RBP9.08□□□□□ -0.96
HFI1YPL254W YDL129WQ07555 291 aa9.06□□□□□ -0.96
HFI1YPL254W RPP1BP10622 106 aaKnown RBP9.05□□□□□ -0.96
HFI1YPL254W PEX29Q03370 554 aa9.05□□□□□ -0.96
HFI1YPL254W PSE1P32337 1089 aaKnown RBP9.03□□□□□ -0.96
HFI1YPL254W MPC54Q08550 464 aa9.03□□□□□ -0.96
HFI1YPL254W ATF2P53296 535 aa9.02□□□□□ -0.96
HFI1YPL254W SAP30P38429 201 aa9.02□□□□□ -0.97
HFI1YPL254W DPL1Q05567 589 aa9.02□□□□□ -0.97
HFI1YPL254W AIM7Q12156 149 aa9□□□□□ -0.97
HFI1YPL254W GAP1P19145 602 aaPredicted RBP8.99□□□□□ -0.97
HFI1YPL254W RGR1P19263 1082 aa8.99□□□□□ -0.97
HFI1YPL254W CSC1Q06538 782 aa8.99□□□□□ -0.97
HFI1YPL254W MVP1P40959 511 aaKnown RBP8.98□□□□□ -0.97
HFI1YPL254W KIN1P13185 1064 aa8.97□□□□□ -0.97
HFI1YPL254W YJL171CP46992 396 aa8.97□□□□□ -0.97
HFI1YPL254W PEX21P50091 288 aa8.97□□□□□ -0.97
HFI1YPL254W NMA111P53920 997 aa8.96□□□□□ -0.97
HFI1YPL254W BMT6Q12291 365 aa8.95□□□□□ -0.98
HFI1YPL254W TFB4Q12004 338 aa8.93□□□□□ -0.98
HFI1YPL254W ISU2Q12056 156 aa8.93□□□□□ -0.98
HFI1YPL254W TEA1P47988 759 aa8.92□□□□□ -0.98
HFI1YPL254W YDR344CQ05510 147 aa8.92□□□□□ -0.98
HFI1YPL254W YPR109WQ06104 294 aa8.92□□□□□ -0.98
HFI1YPL254W TUM1Q08686 304 aaKnown RBP8.92□□□□□ -0.98
HFI1YPL254W SPA2P23201 1466 aaKnown RBP8.91□□□□□ -0.98
HFI1YPL254W ARH1P48360 493 aa8.89□□□□□ -0.99
HFI1YPL254W HAP5Q02516 242 aa8.89□□□□□ -0.99
HFI1YPL254W SSN2P38931 1420 aa8.89□□□□□ -0.99
HFI1YPL254W ELP4Q02884 456 aaKnown RBP8.89□□□□□ -0.99
HFI1YPL254W YRR1Q12172 810 aa8.89□□□□□ -0.99
HFI1YPL254W CLB5P30283 435 aa8.88□□□□□ -0.99
HFI1YPL254W INO80P53115 1489 aa8.86□□□□□ -0.99
HFI1YPL254W PDR1P12383 1068 aa8.83□□□□□ -1
HFI1YPL254W PRE3P38624 215 aa8.81□□□□□ -1
HFI1YPL254W GUA1P38625 525 aaKnown RBP8.81□□□□□ -1
HFI1YPL254W NIS1P53939 407 aa8.81□□□□□ -1
HFI1YPL254W BNI4P53858 892 aa8.8□□□□□ -1
HFI1YPL254W SPT23P35210 1082 aa8.79□□□□□ -1
HFI1YPL254W DMA2P53924 522 aa8.78□□□□□ -1
HFI1YPL254W YMR196WQ04336 1088 aa8.77□□□□□ -1
HFI1YPL254W CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1.01
HFI1YPL254W NUD1P32336 851 aa8.77□□□□□ -1.01
HFI1YPL254W CSN12P47130 423 aa8.77□□□□□ -1.01
HFI1YPL254W FPK1P53739 893 aa8.77□□□□□ -1.01
HFI1YPL254W PTC2P39966 464 aaKnown RBP8.76□□□□□ -1.01
HFI1YPL254W TYW1Q08960 810 aaKnown RBP8.76□□□□□ -1.01
HFI1YPL254W NPL4P33755 580 aa8.73□□□□□ -1.01
HFI1YPL254W SIT4P20604 311 aa8.72□□□□□ -1.01
HFI1YPL254W RAM1P22007 431 aa8.71□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 123.7 ms