RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W MTC1P47018 478 aaKnown RBP15.69■□□□□ 0.1
HFI1YPL254W DRS1P32892 752 aaKnown RBP15.68■□□□□ 0.1
HFI1YPL254W BFR2Q06631 534 aaKnown RBP13.49□□□□□ -0.25
HFI1YPL254W DIP2Q12220 943 aaPredicted RBP13.38□□□□□ -0.27
HFI1YPL254W AVT3P36062 692 aa13.14□□□□□ -0.31
HFI1YPL254W FAP1P53971 965 aa13.08□□□□□ -0.32
HFI1YPL254W ISW2Q08773 1120 aa12.81□□□□□ -0.36
HFI1YPL254W PRI1P10363 409 aa12.68□□□□□ -0.38
HFI1YPL254W RPG1P38249 964 aaKnown RBP12.65□□□□□ -0.38
HFI1YPL254W RSE1Q04693 1361 aaKnown RBP12.65□□□□□ -0.38
HFI1YPL254W TFA1P36100 482 aa12.57□□□□□ -0.4
HFI1YPL254W AAD16Q02895 342 aa12.48□□□□□ -0.41
HFI1YPL254W PRY3P47033 881 aa12.24□□□□□ -0.45
HFI1YPL254W RPL17AP05740 184 aaKnown RBP12.2□□□□□ -0.46
HFI1YPL254W RPL17BP46990 184 aaKnown RBP12.2□□□□□ -0.46
HFI1YPL254W REB1P21538 810 aa12.07□□□□□ -0.48
HFI1YPL254W TSR3Q12094 313 aaKnown RBP12.07□□□□□ -0.48
HFI1YPL254W SPT21P35209 758 aa11.7□□□□□ -0.54
HFI1YPL254W MRPL32P25348 183 aa11.58□□□□□ -0.56
HFI1YPL254W YCK3P39962 524 aa11.53□□□□□ -0.56
HFI1YPL254W RIM101P33400 625 aa11.52□□□□□ -0.56
HFI1YPL254W HAA1Q12753 694 aaKnown RBP11.49□□□□□ -0.57
HFI1YPL254W YKR023WP36119 530 aaKnown RBP11.37□□□□□ -0.59
HFI1YPL254W OXP1P28273 1286 aa11.18□□□□□ -0.62
HFI1YPL254W HOP09932 586 aa11.17□□□□□ -0.62
HFI1YPL254W CDC27P38042 758 aa11.17□□□□□ -0.62
HFI1YPL254W TFC8Q12308 588 aa11.13□□□□□ -0.63
HFI1YPL254W DCD1P06773 312 aa11.11□□□□□ -0.63
HFI1YPL254W PTP3P40048 928 aa11.11□□□□□ -0.63
HFI1YPL254W YIL055CP40523 627 aaKnown RBP11.05□□□□□ -0.64
HFI1YPL254W YAH1Q12184 172 aaKnown RBP11.04□□□□□ -0.64
HFI1YPL254W SSP1P38871 571 aa10.96□□□□□ -0.65
HFI1YPL254W RSM7P47150 247 aa10.85□□□□□ -0.67
HFI1YPL254W YLR271WQ06152 274 aa10.85□□□□□ -0.67
HFI1YPL254W YGL015CP33199 130 aa10.82□□□□□ -0.68
HFI1YPL254W BCH2P36122 765 aa10.82□□□□□ -0.68
HFI1YPL254W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
HFI1YPL254W MAP2P38174 421 aaKnown RBP10.72□□□□□ -0.69
HFI1YPL254W SCY1P53009 804 aa10.69□□□□□ -0.7
HFI1YPL254W UBP10P53874 792 aaPredicted RBP10.69□□□□□ -0.7
HFI1YPL254W AI2P03876 854 aa10.68□□□□□ -0.7
HFI1YPL254W EPS1P40557 701 aa10.63□□□□□ -0.71
HFI1YPL254W BBC1P47068 1157 aa10.62□□□□□ -0.71
HFI1YPL254W MGA2P40578 1113 aa10.58□□□□□ -0.72
HFI1YPL254W BDF1P35817 686 aa10.55□□□□□ -0.72
HFI1YPL254W PSD2P53037 1138 aaKnown RBP10.55□□□□□ -0.72
HFI1YPL254W CST9Q06032 482 aa10.53□□□□□ -0.72
HFI1YPL254W RQC2Q12532 1038 aaKnown RBP10.51□□□□□ -0.73
HFI1YPL254W SLX5P32828 619 aaKnown RBP10.48□□□□□ -0.73
HFI1YPL254W MRM1P25270 412 aa10.36□□□□□ -0.75
HFI1YPL254W DMA1P38823 416 aa10.35□□□□□ -0.75
HFI1YPL254W TIF4632P39936 914 aaKnown RBP10.28□□□□□ -0.76
HFI1YPL254W RTG3P38165 486 aa10.19□□□□□ -0.78
HFI1YPL254W TGL3P40308 642 aa10.19□□□□□ -0.78
HFI1YPL254W RCR1P38212 213 aa10.18□□□□□ -0.78
HFI1YPL254W RAM2P29703 316 aa10.1□□□□□ -0.79
HFI1YPL254W VPS29P38759 282 aa10.08□□□□□ -0.8
HFI1YPL254W YMR1P47147 688 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
HFI1YPL254W NSR1P27476 414 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
HFI1YPL254W YAP5P40574 245 aa10□□□□□ -0.81
HFI1YPL254W YOR238WQ08634 303 aa9.98□□□□□ -0.81
HFI1YPL254W DBP1P24784 617 aaKnown RBP9.96□□□□□ -0.82
HFI1YPL254W YFR006WP43590 535 aa9.96□□□□□ -0.82
HFI1YPL254W MAK11P20484 414 aaKnown RBP9.95□□□□□ -0.82
HFI1YPL254W STS1P38637 319 aa9.95□□□□□ -0.82
HFI1YPL254W PIB1Q06651 286 aa9.95□□□□□ -0.82
HFI1YPL254W SET1P38827 1080 aaKnown RBP9.87□□□□□ -0.83
HFI1YPL254W MST1P07236 462 aa9.85□□□□□ -0.83
HFI1YPL254W COQ8P27697 501 aa9.83□□□□□ -0.84
HFI1YPL254W MIF2P35201 549 aa9.83□□□□□ -0.84
HFI1YPL254W SAS10Q12136 610 aaPredicted RBP9.78□□□□□ -0.84
HFI1YPL254W VMA1P17255 1071 aaKnown RBP9.77□□□□□ -0.85
HFI1YPL254W GTT3P39996 337 aa9.77□□□□□ -0.85
HFI1YPL254W EDS1P38073 919 aa9.76□□□□□ -0.85
HFI1YPL254W PTC3P34221 468 aaKnown RBP9.69□□□□□ -0.86
HFI1YPL254W IFH1P39520 1085 aa9.67□□□□□ -0.86
HFI1YPL254W NOP53Q12080 455 aaKnown RBP9.67□□□□□ -0.86
HFI1YPL254W VPS70P47161 811 aa9.66□□□□□ -0.86
HFI1YPL254W YPR148CQ06523 435 aa9.66□□□□□ -0.86
HFI1YPL254W WSC3Q12215 556 aa9.65□□□□□ -0.87
HFI1YPL254W SAM3Q08986 587 aa9.64□□□□□ -0.87
HFI1YPL254W GRE2Q12068 342 aaKnown RBP9.6□□□□□ -0.87
HFI1YPL254W UBP9P39967 754 aa9.59□□□□□ -0.87
HFI1YPL254W YBL029C-AQ3E756 94 aa9.59□□□□□ -0.87
HFI1YPL254W SET4P42948 560 aa9.59□□□□□ -0.87
HFI1YPL254W YOL036WQ08206 761 aa9.59□□□□□ -0.87
HFI1YPL254W GYP5Q12344 894 aa9.59□□□□□ -0.87
HFI1YPL254W ATH1P48016 1211 aa9.58□□□□□ -0.88
HFI1YPL254W CKB1P43639 278 aa9.54□□□□□ -0.88
HFI1YPL254W GUT1P32190 709 aa9.53□□□□□ -0.88
HFI1YPL254W VNX1P42839 908 aa9.53□□□□□ -0.88
HFI1YPL254W MSB4Q12317 492 aa9.52□□□□□ -0.89
HFI1YPL254W DCW1P36091 449 aa9.51□□□□□ -0.89
HFI1YPL254W SPB4P25808 606 aaPredicted RBP9.48□□□□□ -0.89
HFI1YPL254W ABP1P15891 592 aaKnown RBP9.47□□□□□ -0.89
HFI1YPL254W SPP1Q03012 353 aa9.47□□□□□ -0.89
HFI1YPL254W BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
HFI1YPL254W HTA1P04911 132 aaKnown RBP9.45□□□□□ -0.9
HFI1YPL254W HTA2P04912 132 aa9.45□□□□□ -0.9
HFI1YPL254W REF2P42073 533 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms