RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W HTA2P04912 132 aa8.02□□□□□ -1.13
RET3YPL010W TFG1P41895 735 aaPredicted RBP8.01□□□□□ -1.13
RET3YPL010W SAP30P38429 201 aa8□□□□□ -1.13
RET3YPL010W NOP53Q12080 455 aaKnown RBP7.99□□□□□ -1.13
RET3YPL010W SWR1Q05471 1514 aa7.98□□□□□ -1.13
RET3YPL010W EDS1P38073 919 aa7.98□□□□□ -1.13
RET3YPL010W GRE2Q12068 342 aaKnown RBP7.98□□□□□ -1.13
RET3YPL010W PTC3P34221 468 aaKnown RBP7.97□□□□□ -1.13
RET3YPL010W MIF2P35201 549 aa7.97□□□□□ -1.13
RET3YPL010W DCW1P36091 449 aa7.97□□□□□ -1.13
RET3YPL010W PTC4P38089 393 aa7.97□□□□□ -1.13
RET3YPL010W COQ8P27697 501 aa7.96□□□□□ -1.14
RET3YPL010W GUT1P32190 709 aa7.95□□□□□ -1.14
RET3YPL010W YEL023CP39992 682 aa7.95□□□□□ -1.14
RET3YPL010W YDL129WQ07555 291 aa7.95□□□□□ -1.14
RET3YPL010W KOG1P38873 1557 aa7.94□□□□□ -1.14
RET3YPL010W TCB3Q03640 1545 aaKnown RBP7.93□□□□□ -1.14
RET3YPL010W ATH1P48016 1211 aa7.92□□□□□ -1.14
RET3YPL010W BCK2P33306 851 aa7.91□□□□□ -1.14
RET3YPL010W CHL1P22516 861 aaPredicted RBP7.9□□□□□ -1.14
RET3YPL010W PRE3P38624 215 aa7.88□□□□□ -1.15
RET3YPL010W NST1P53935 1240 aa7.87□□□□□ -1.15
RET3YPL010W YDR344CQ05510 147 aa7.84□□□□□ -1.15
RET3YPL010W SOL3P38858 249 aa7.83□□□□□ -1.16
RET3YPL010W AI4P03878 556 aa7.8□□□□□ -1.16
RET3YPL010W MPH3P0CE00 602 aa7.8□□□□□ -1.16
RET3YPL010W TY1B-DR4Q07793 1604 aa7.78□□□□□ -1.16
RET3YPL010W PML39Q03760 334 aa7.77□□□□□ -1.17
RET3YPL010W SGS1P35187 1447 aa7.77□□□□□ -1.17
RET3YPL010W YGR273CP53329 174 aa7.75□□□□□ -1.17
RET3YPL010W VRP1P37370 817 aa7.74□□□□□ -1.17
RET3YPL010W SET1P38827 1080 aaKnown RBP7.74□□□□□ -1.17
RET3YPL010W XDJ1P39102 459 aa7.71□□□□□ -1.18
RET3YPL010W ELP4Q02884 456 aaKnown RBP7.71□□□□□ -1.18
RET3YPL010W ILV3P39522 585 aaKnown RBP7.7□□□□□ -1.18
RET3YPL010W ARH1P48360 493 aa7.69□□□□□ -1.18
RET3YPL010W MID1P41821 548 aa7.67□□□□□ -1.18
RET3YPL010W IFH1P39520 1085 aa7.65□□□□□ -1.18
RET3YPL010W KEX1P09620 729 aa7.6□□□□□ -1.19
RET3YPL010W PEX29Q03370 554 aa7.6□□□□□ -1.19
RET3YPL010W SPT23P35210 1082 aa7.59□□□□□ -1.19
RET3YPL010W UBP14P38237 781 aaKnown RBP7.59□□□□□ -1.19
RET3YPL010W SLI15P38283 698 aa7.59□□□□□ -1.19
RET3YPL010W YPR148CQ06523 435 aa7.59□□□□□ -1.19
RET3YPL010W MPC54Q08550 464 aa7.59□□□□□ -1.19
RET3YPL010W SPT6P23615 1451 aaKnown RBP7.59□□□□□ -1.19
RET3YPL010W DPS1P04802 557 aaKnown RBP7.58□□□□□ -1.2
RET3YPL010W HAP5Q02516 242 aa7.58□□□□□ -1.2
RET3YPL010W SPA2P23201 1466 aaKnown RBP7.56□□□□□ -1.2
RET3YPL010W ECM5Q03214 1411 aa7.56□□□□□ -1.2
RET3YPL010W BNI4P53858 892 aa7.56□□□□□ -1.2
RET3YPL010W YLR326WQ06170 240 aaKnown RBP7.56□□□□□ -1.2
RET3YPL010W DPL1Q05567 589 aa7.54□□□□□ -1.2
RET3YPL010W HSL1P34244 1518 aa7.53□□□□□ -1.2
RET3YPL010W YML082WQ04533 649 aaKnown RBP7.53□□□□□ -1.2
RET3YPL010W NMA111P53920 997 aa7.52□□□□□ -1.21
RET3YPL010W VHR2P40041 505 aa7.51□□□□□ -1.21
RET3YPL010W PCS60P38137 543 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21 RIP-Chip
RET3YPL010W ISU2Q12056 156 aa7.49□□□□□ -1.21
RET3YPL010W RAD54P32863 898 aa7.48□□□□□ -1.21
RET3YPL010W PTC2P39966 464 aaKnown RBP7.47□□□□□ -1.21
RET3YPL010W REF2P42073 533 aaPredicted RBP7.47□□□□□ -1.21
RET3YPL010W YDR090CQ03193 310 aa7.47□□□□□ -1.21
RET3YPL010W CDC73Q06697 393 aa7.45□□□□□ -1.22
RET3YPL010W BUD4P47136 1447 aa7.44□□□□□ -1.22
RET3YPL010W RPP1BP10622 106 aaKnown RBP7.44□□□□□ -1.22
RET3YPL010W SRC1Q03707 834 aa7.44□□□□□ -1.22
RET3YPL010W MAK21Q12176 1025 aaKnown RBP7.42□□□□□ -1.22
RET3YPL010W RAM1P22007 431 aa7.4□□□□□ -1.22
RET3YPL010W VPS70P47161 811 aa7.4□□□□□ -1.22
RET3YPL010W KIC1P38692 1080 aa7.39□□□□□ -1.23
RET3YPL010W COX6P00427 148 aa7.38□□□□□ -1.23
RET3YPL010W GAP1P19145 602 aaPredicted RBP7.38□□□□□ -1.23
RET3YPL010W HIR3P47171 1648 aa7.38□□□□□ -1.23
RET3YPL010W THO2P53552 1597 aaKnown RBP7.37□□□□□ -1.23
RET3YPL010W CKB1P43639 278 aa7.36□□□□□ -1.23
RET3YPL010W CSC1Q06538 782 aa7.35□□□□□ -1.23
RET3YPL010W YPR015CQ12531 247 aa7.35□□□□□ -1.23
RET3YPL010W TFB4Q12004 338 aa7.34□□□□□ -1.23
RET3YPL010W SAS10Q12136 610 aaPredicted RBP7.33□□□□□ -1.24
RET3YPL010W ORC6P38826 435 aa7.32□□□□□ -1.24
RET3YPL010W MDS3P53094 1487 aa7.31□□□□□ -1.24
RET3YPL010W RAS1P01119 309 aa7.31□□□□□ -1.24
RET3YPL010W PDR1P12383 1068 aa7.3□□□□□ -1.24
RET3YPL010W DMA1P38823 416 aa7.29□□□□□ -1.24
RET3YPL010W SAS4Q04003 481 aa7.29□□□□□ -1.24
RET3YPL010W PEX21P50091 288 aa7.28□□□□□ -1.24
RET3YPL010W XRN1P22147 1528 aaKnown RBP7.27□□□□□ -1.25
RET3YPL010W RGA2Q06407 1009 aa7.26□□□□□ -1.25
RET3YPL010W YRR1Q12172 810 aa7.26□□□□□ -1.25
RET3YPL010W REV3P14284 1504 aa7.26□□□□□ -1.25
RET3YPL010W PBS2P08018 668 aa7.25□□□□□ -1.25
RET3YPL010W MVP1P40959 511 aaKnown RBP7.24□□□□□ -1.25
RET3YPL010W GYP1Q08484 637 aa7.23□□□□□ -1.25
RET3YPL010W TUM1Q08686 304 aaKnown RBP7.23□□□□□ -1.25
RET3YPL010W BUD20Q08004 166 aaPredicted RBP7.22□□□□□ -1.25
RET3YPL010W RGR1P19263 1082 aa7.21□□□□□ -1.26
RET3YPL010W RGA1P39083 1007 aa7.21□□□□□ -1.26
RET3YPL010W DSF2P38213 736 aa7.2□□□□□ -1.26
RET3YPL010W PRT1P06103 763 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 163.9 ms