RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C SEC9P40357 651 aa7.3□□□□□ -1.24
LDB19YOR322C ETT1Q08421 412 aaKnown RBP7.3□□□□□ -1.24
LDB19YOR322C DOS2P54858 310 aa7.28□□□□□ -1.24
LDB19YOR322C KIP3P53086 805 aaKnown RBP7.28□□□□□ -1.24
LDB19YOR322C YML020WQ03722 664 aa7.28□□□□□ -1.24
LDB19YOR322C YSH1Q06224 779 aaPredicted RBP7.28□□□□□ -1.24
LDB19YOR322C PDR1P12383 1068 aa7.27□□□□□ -1.25
LDB19YOR322C RTS3P53289 263 aa7.27□□□□□ -1.25
LDB19YOR322C ZDS1P50111 915 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C PIL1P53252 339 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C BRE1Q07457 700 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C TY1B-AO13527 1196 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C SSF1P38789 453 aaPredicted RBP7.26□□□□□ -1.25
LDB19YOR322C NMD2P38798 1089 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C THO2P53552 1597 aaKnown RBP7.26□□□□□ -1.25
LDB19YOR322C SPC110P32380 944 aa7.25□□□□□ -1.25
LDB19YOR322C GEF1P37020 779 aa7.25□□□□□ -1.25
LDB19YOR322C CEF1Q03654 590 aaPredicted RBP7.25□□□□□ -1.25
LDB19YOR322C SEC20P28791 383 aa7.23□□□□□ -1.25
LDB19YOR322C SPC42P36094 363 aa7.23□□□□□ -1.25
LDB19YOR322C YMR196WQ04336 1088 aa7.23□□□□□ -1.25
LDB19YOR322C YJR008WP47085 338 aa7.23□□□□□ -1.25
LDB19YOR322C HOS4P40480 1083 aa7.22□□□□□ -1.25
LDB19YOR322C NNF2P53253 936 aa7.22□□□□□ -1.25
LDB19YOR322C RAD2P07276 1031 aa7.21□□□□□ -1.25
LDB19YOR322C LEM3P42838 414 aa7.21□□□□□ -1.25
LDB19YOR322C PKH1Q03407 766 aa7.2□□□□□ -1.26
LDB19YOR322C YTA7P40340 1379 aa7.2□□□□□ -1.26
LDB19YOR322C PEA2P40091 420 aa7.2□□□□□ -1.26
LDB19YOR322C VPS4P52917 437 aa7.2□□□□□ -1.26
LDB19YOR322C ECM16Q04217 1267 aaKnown RBP7.19□□□□□ -1.26
LDB19YOR322C PSK2Q08217 1101 aa7.19□□□□□ -1.26
LDB19YOR322C RRP14P36080 434 aaKnown RBP7.18□□□□□ -1.26
LDB19YOR322C TY4A-JP47023 414 aa7.18□□□□□ -1.26
LDB19YOR322C SSA4P22202 642 aaKnown RBP7.17□□□□□ -1.26
LDB19YOR322C RIX1P38883 763 aaPredicted RBP7.17□□□□□ -1.26
LDB19YOR322C NAB3P38996 802 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
LDB19YOR322C RPT2P40327 437 aaKnown RBP7.17□□□□□ -1.26
LDB19YOR322C AIM21P40563 679 aa7.17□□□□□ -1.26
LDB19YOR322C DJP1P40564 432 aa7.17□□□□□ -1.26
LDB19YOR322C SUP35P05453 685 aaKnown RBP7.17□□□□□ -1.26
LDB19YOR322C RAD51P25454 400 aa7.16□□□□□ -1.26
LDB19YOR322C RCF1Q03713 159 aa7.16□□□□□ -1.26
LDB19YOR322C SEC3P33332 1336 aaKnown RBP7.15□□□□□ -1.27
LDB19YOR322C GIR2Q03768 265 aaPredicted RBP7.15□□□□□ -1.27
LDB19YOR322C MYO2P19524 1574 aaKnown RBP7.14□□□□□ -1.27
LDB19YOR322C GAL11P19659 1081 aa7.14□□□□□ -1.27
LDB19YOR322C CFT2Q12102 859 aaPredicted RBP7.14□□□□□ -1.27
LDB19YOR322C PEP1P32319 1579 aa7.14□□□□□ -1.27
LDB19YOR322C DNF1P32660 1571 aa7.14□□□□□ -1.27
LDB19YOR322C CDC11P32458 415 aa7.13□□□□□ -1.27
LDB19YOR322C GDE1Q02979 1223 aa7.13□□□□□ -1.27
LDB19YOR322C TAF1P46677 1066 aa7.13□□□□□ -1.27
LDB19YOR322C HSC82P15108 705 aaKnown RBP7.12□□□□□ -1.27
LDB19YOR322C MSH3P25336 1018 aa7.12□□□□□ -1.27
LDB19YOR322C PIM1P36775 1133 aa7.12□□□□□ -1.27
LDB19YOR322C NMD3P38861 518 aaKnown RBP7.12□□□□□ -1.27
LDB19YOR322C MTR4P47047 1073 aaKnown RBP7.12□□□□□ -1.27
LDB19YOR322C YLR257WQ06146 321 aaKnown RBP7.12□□□□□ -1.27
LDB19YOR322C RPN7Q06103 429 aaKnown RBP7.11□□□□□ -1.27
LDB19YOR322C SPB4P25808 606 aaPredicted RBP7.11□□□□□ -1.27
LDB19YOR322C FAF1P40546 346 aaPredicted RBP7.11□□□□□ -1.27
LDB19YOR322C CLF1Q12309 687 aaPredicted RBP7.11□□□□□ -1.27
LDB19YOR322C AIM20P40451 204 aa7.1□□□□□ -1.27
LDB19YOR322C MEH1Q02205 184 aa7.1□□□□□ -1.27
LDB19YOR322C YDR341CQ05506 607 aaKnown RBP7.1□□□□□ -1.27
LDB19YOR322C RIX7Q07844 837 aaKnown RBP7.1□□□□□ -1.27
LDB19YOR322C VPS5Q92331 675 aa7.1□□□□□ -1.27
LDB19YOR322C RPA135P22138 1203 aaKnown RBP7.09□□□□□ -1.27
LDB19YOR322C YLL054CQ12244 843 aa7.09□□□□□ -1.27
LDB19YOR322C PAM1P37304 830 aaKnown RBP7.09□□□□□ -1.27
LDB19YOR322C APL5Q08951 932 aaKnown RBP7.09□□□□□ -1.27
LDB19YOR322C IRC20Q06554 1556 aa7.09□□□□□ -1.28
LDB19YOR322C MPE1P35728 441 aaKnown RBP7.08□□□□□ -1.28
LDB19YOR322C RSC8P43609 557 aaKnown RBP7.08□□□□□ -1.28
LDB19YOR322C DEP1P31385 405 aa7.08□□□□□ -1.28
LDB19YOR322C MSH4P40965 878 aaPredicted RBP7.08□□□□□ -1.28
LDB19YOR322C NST1P53935 1240 aa7.08□□□□□ -1.28
LDB19YOR322C NFU1P32860 256 aa7.07□□□□□ -1.28
LDB19YOR322C PMC1P38929 1173 aaPredicted RBP7.07□□□□□ -1.28
LDB19YOR322C UBX5Q06682 500 aa7.07□□□□□ -1.28
LDB19YOR322C SEC27P41811 889 aaKnown RBP7.06□□□□□ -1.28
LDB19YOR322C MRX12P47084 519 aa7.06□□□□□ -1.28
LDB19YOR322C IMH1Q06704 911 aaKnown RBP7.06□□□□□ -1.28
LDB19YOR322C MDS3P53094 1487 aa7.06□□□□□ -1.28
LDB19YOR322C CLC1P17891 233 aa7.06□□□□□ -1.28
LDB19YOR322C SAP190P36123 1033 aa7.06□□□□□ -1.28
LDB19YOR322C POL5P39985 1022 aaKnown RBP7.05□□□□□ -1.28
LDB19YOR322C LTE1P07866 1435 aa7.05□□□□□ -1.28
LDB19YOR322C LTV1P34078 463 aa7.05□□□□□ -1.28
LDB19YOR322C UBP1P25037 809 aa7.04□□□□□ -1.28
LDB19YOR322C OCA5P38738 679 aa7.04□□□□□ -1.28
LDB19YOR322C SIC1P38634 284 aa7.04□□□□□ -1.28
LDB19YOR322C SLX8P40072 274 aa7.04□□□□□ -1.28
LDB19YOR322C CBF5P33322 483 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
LDB19YOR322C NOP7P53261 605 aaKnown RBP7.03□□□□□ -1.28
LDB19YOR322C PSR1Q07800 427 aa7.03□□□□□ -1.28
LDB19YOR322C HXT5P38695 592 aa7.03□□□□□ -1.28
LDB19YOR322C JIP5Q06214 492 aaPredicted RBP7.03□□□□□ -1.28
LDB19YOR322C CDC45Q08032 650 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms