RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C LDB19Q12502 818 aa8.75□□□□□ -1.01
RPB8YOR224C YEL023CP39992 682 aa8.71□□□□□ -1.02
RPB8YOR224C IOC2Q12072 812 aa8.71□□□□□ -1.02
RPB8YOR224C YPR148CQ06523 435 aa8.69□□□□□ -1.02
RPB8YOR224C SAS10Q12136 610 aaPredicted RBP8.69□□□□□ -1.02
RPB8YOR224C RTG1P32607 177 aa8.67□□□□□ -1.02
RPB8YOR224C PTC4P38089 393 aa8.66□□□□□ -1.02
RPB8YOR224C YNL035CP53962 389 aaKnown RBP8.66□□□□□ -1.02
RPB8YOR224C JIP4Q03361 876 aa8.66□□□□□ -1.02
RPB8YOR224C TFG1P41895 735 aaPredicted RBP8.65□□□□□ -1.02
RPB8YOR224C CKB1P43639 278 aa8.65□□□□□ -1.02
RPB8YOR224C YGR273CP53329 174 aa8.64□□□□□ -1.03
RPB8YOR224C SPB4P25808 606 aaPredicted RBP8.63□□□□□ -1.03
RPB8YOR224C VHR2P40041 505 aa8.63□□□□□ -1.03
RPB8YOR224C REF2P42073 533 aaPredicted RBP8.62□□□□□ -1.03
RPB8YOR224C SOL3P38858 249 aa8.61□□□□□ -1.03
RPB8YOR224C NCR1Q12200 1170 aa8.61□□□□□ -1.03
RPB8YOR224C SEC61P32915 480 aa8.58□□□□□ -1.04
RPB8YOR224C YJL171CP46992 396 aa8.58□□□□□ -1.04
RPB8YOR224C KIC1P38692 1080 aa8.57□□□□□ -1.04
RPB8YOR224C FKH1P40466 484 aa8.56□□□□□ -1.04
RPB8YOR224C AI4P03878 556 aa8.55□□□□□ -1.04
RPB8YOR224C PBS2P08018 668 aa8.55□□□□□ -1.04
RPB8YOR224C MPH3P0CE00 602 aa8.55□□□□□ -1.04
RPB8YOR224C DAN4P47179 1161 aa8.55□□□□□ -1.04
RPB8YOR224C KEX1P09620 729 aa8.54□□□□□ -1.04
RPB8YOR224C PML39Q03760 334 aa8.54□□□□□ -1.04
RPB8YOR224C UBP14P38237 781 aaKnown RBP8.53□□□□□ -1.04
RPB8YOR224C YLR326WQ06170 240 aaKnown RBP8.53□□□□□ -1.04
RPB8YOR224C RAD54P32863 898 aa8.52□□□□□ -1.05
RPB8YOR224C NST1P53935 1240 aa8.52□□□□□ -1.05
RPB8YOR224C AIR2Q12476 344 aaKnown RBP8.52□□□□□ -1.05
RPB8YOR224C PEX29Q03370 554 aa8.49□□□□□ -1.05
RPB8YOR224C SAP30P38429 201 aa8.48□□□□□ -1.05
RPB8YOR224C ILV3P39522 585 aaKnown RBP8.48□□□□□ -1.05
RPB8YOR224C MID1P41821 548 aa8.47□□□□□ -1.05
RPB8YOR224C YDL129WQ07555 291 aa8.47□□□□□ -1.05
RPB8YOR224C MAK21Q12176 1025 aaKnown RBP8.47□□□□□ -1.05
RPB8YOR224C BMT6Q12291 365 aa8.47□□□□□ -1.05
RPB8YOR224C COX6P00427 148 aa8.46□□□□□ -1.06
RPB8YOR224C PCS60P38137 543 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
RPB8YOR224C MAM3Q12296 706 aa8.46□□□□□ -1.06
RPB8YOR224C SLI15P38283 698 aa8.45□□□□□ -1.06
RPB8YOR224C YDR090CQ03193 310 aa8.44□□□□□ -1.06
RPB8YOR224C RPP1BP10622 106 aaKnown RBP8.41□□□□□ -1.06
RPB8YOR224C DSF2P38213 736 aa8.41□□□□□ -1.06
RPB8YOR224C IES2P40154 320 aa8.38□□□□□ -1.07
RPB8YOR224C CDC73Q06697 393 aa8.36□□□□□ -1.07
RPB8YOR224C ELP4Q02884 456 aaKnown RBP8.35□□□□□ -1.07
RPB8YOR224C MPC54Q08550 464 aa8.35□□□□□ -1.07
RPB8YOR224C PEX21P50091 288 aa8.34□□□□□ -1.07
RPB8YOR224C DPL1Q05567 589 aa8.34□□□□□ -1.07
RPB8YOR224C NMA111P53920 997 aa8.31□□□□□ -1.08
RPB8YOR224C LEU3P08638 886 aa8.29□□□□□ -1.08
RPB8YOR224C DIT2P21595 489 aa8.28□□□□□ -1.08
RPB8YOR224C HAP5Q02516 242 aa8.28□□□□□ -1.08
RPB8YOR224C ARH1P48360 493 aa8.27□□□□□ -1.09
RPB8YOR224C NUP42P49686 430 aaKnown RBP8.26□□□□□ -1.09
RPB8YOR224C YDR344CQ05510 147 aa8.26□□□□□ -1.09
RPB8YOR224C ISU2Q12056 156 aa8.26□□□□□ -1.09
RPB8YOR224C PRE3P38624 215 aa8.25□□□□□ -1.09
RPB8YOR224C ORC6P38826 435 aa8.25□□□□□ -1.09
RPB8YOR224C CSC1Q06538 782 aa8.25□□□□□ -1.09
RPB8YOR224C CHL1P22516 861 aaPredicted RBP8.24□□□□□ -1.09
RPB8YOR224C ATF2P53296 535 aa8.23□□□□□ -1.09
RPB8YOR224C TUM1Q08686 304 aaKnown RBP8.23□□□□□ -1.09
RPB8YOR224C PSE1P32337 1089 aaKnown RBP8.21□□□□□ -1.1
RPB8YOR224C MVP1P40959 511 aaKnown RBP8.21□□□□□ -1.1
RPB8YOR224C YRR1Q12172 810 aa8.21□□□□□ -1.1
RPB8YOR224C GLC3P32775 704 aa8.2□□□□□ -1.1
RPB8YOR224C SPT23P35210 1082 aa8.2□□□□□ -1.1
RPB8YOR224C YNR021WP53723 404 aaKnown RBP8.2□□□□□ -1.1
RPB8YOR224C TFB4Q12004 338 aa8.2□□□□□ -1.1
RPB8YOR224C RGR1P19263 1082 aa8.19□□□□□ -1.1
RPB8YOR224C YPR109WQ06104 294 aa8.19□□□□□ -1.1
RPB8YOR224C PTC2P39966 464 aaKnown RBP8.18□□□□□ -1.1
RPB8YOR224C RPN1P38764 993 aaKnown RBP8.17□□□□□ -1.1
RPB8YOR224C BNI4P53858 892 aa8.16□□□□□ -1.1
RPB8YOR224C GAP1P19145 602 aaPredicted RBP8.15□□□□□ -1.1
RPB8YOR224C TEA1P47988 759 aa8.15□□□□□ -1.1
RPB8YOR224C PDR1P12383 1068 aa8.13□□□□□ -1.11
RPB8YOR224C NPL4P33755 580 aa8.12□□□□□ -1.11
RPB8YOR224C CLB5P30283 435 aa8.11□□□□□ -1.11
RPB8YOR224C VRP1P37370 817 aa8.09□□□□□ -1.11
RPB8YOR224C NUD1P32336 851 aa8.08□□□□□ -1.12
RPB8YOR224C AIM7Q12156 149 aa8.07□□□□□ -1.12
RPB8YOR224C LEO1P38439 464 aa8.06□□□□□ -1.12
RPB8YOR224C YMR196WQ04336 1088 aa8.06□□□□□ -1.12
RPB8YOR224C KIN1P13185 1064 aa8.05□□□□□ -1.12
RPB8YOR224C BCK2P33306 851 aa8.05□□□□□ -1.12
RPB8YOR224C YML082WQ04533 649 aaKnown RBP8.05□□□□□ -1.12
RPB8YOR224C GCD11P32481 527 aaKnown RBP8.03□□□□□ -1.12
RPB8YOR224C GYP1Q08484 637 aa8.03□□□□□ -1.12
RPB8YOR224C NIS1P53939 407 aa8.01□□□□□ -1.13
RPB8YOR224C RAM1P22007 431 aa8□□□□□ -1.13
RPB8YOR224C ISM1P48526 1002 aa8□□□□□ -1.13
RPB8YOR224C YPR015CQ12531 247 aa8□□□□□ -1.13
RPB8YOR224C STR2P47164 639 aa7.99□□□□□ -1.13
RPB8YOR224C KEX2P13134 814 aa7.98□□□□□ -1.13
RPB8YOR224C FPK1P53739 893 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms