RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C MTC1P47018 478 aaKnown RBP14.61□□□□□ -0.07
RPB8YOR224C DRS1P32892 752 aaKnown RBP14.44□□□□□ -0.1
RPB8YOR224C FAP1P53971 965 aa12.56□□□□□ -0.4
RPB8YOR224C DIP2Q12220 943 aaPredicted RBP12.38□□□□□ -0.43
RPB8YOR224C BFR2Q06631 534 aaKnown RBP12.35□□□□□ -0.43
RPB8YOR224C ISW2Q08773 1120 aa12.04□□□□□ -0.48
RPB8YOR224C AVT3P36062 692 aa12.01□□□□□ -0.49
RPB8YOR224C PRI1P10363 409 aa11.9□□□□□ -0.5
RPB8YOR224C RPG1P38249 964 aaKnown RBP11.89□□□□□ -0.51
RPB8YOR224C AAD16Q02895 342 aa11.79□□□□□ -0.52
RPB8YOR224C RSE1Q04693 1361 aaKnown RBP11.78□□□□□ -0.52
RPB8YOR224C PRY3P47033 881 aa11.73□□□□□ -0.53
RPB8YOR224C RPL17AP05740 184 aaKnown RBP11.38□□□□□ -0.59
RPB8YOR224C RPL17BP46990 184 aaKnown RBP11.38□□□□□ -0.59
RPB8YOR224C TSR3Q12094 313 aaKnown RBP11.38□□□□□ -0.59
RPB8YOR224C REB1P21538 810 aa11.33□□□□□ -0.6
RPB8YOR224C TFA1P36100 482 aa11.26□□□□□ -0.61
RPB8YOR224C MRPL32P25348 183 aa10.96□□□□□ -0.65
RPB8YOR224C HAA1Q12753 694 aaKnown RBP10.96□□□□□ -0.65
RPB8YOR224C YCK3P39962 524 aa10.83□□□□□ -0.68
RPB8YOR224C SPT21P35209 758 aa10.77□□□□□ -0.69
RPB8YOR224C RIM101P33400 625 aa10.58□□□□□ -0.72
RPB8YOR224C YKR023WP36119 530 aaKnown RBP10.54□□□□□ -0.72
RPB8YOR224C HOP09932 586 aa10.43□□□□□ -0.74
RPB8YOR224C CDC27P38042 758 aa10.43□□□□□ -0.74
RPB8YOR224C DCD1P06773 312 aa10.37□□□□□ -0.75
RPB8YOR224C TFC8Q12308 588 aa10.35□□□□□ -0.75
RPB8YOR224C YIL055CP40523 627 aaKnown RBP10.29□□□□□ -0.76
RPB8YOR224C YGL015CP33199 130 aa10.28□□□□□ -0.76
RPB8YOR224C OXP1P28273 1286 aa10.26□□□□□ -0.77
RPB8YOR224C PTP3P40048 928 aa10.24□□□□□ -0.77
RPB8YOR224C YAH1Q12184 172 aaKnown RBP10.23□□□□□ -0.77
RPB8YOR224C BCH2P36122 765 aa10.06□□□□□ -0.8
RPB8YOR224C MAP2P38174 421 aaKnown RBP10.06□□□□□ -0.8
RPB8YOR224C SSP1P38871 571 aa10.04□□□□□ -0.8
RPB8YOR224C RSM7P47150 247 aa10.03□□□□□ -0.8
RPB8YOR224C SCY1P53009 804 aa10.03□□□□□ -0.8
RPB8YOR224C UBP10P53874 792 aaPredicted RBP10.03□□□□□ -0.8
RPB8YOR224C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
RPB8YOR224C YLR271WQ06152 274 aa9.95□□□□□ -0.82
RPB8YOR224C BBC1P47068 1157 aa9.9□□□□□ -0.82
RPB8YOR224C AI2P03876 854 aa9.88□□□□□ -0.83
RPB8YOR224C EPS1P40557 701 aa9.88□□□□□ -0.83
RPB8YOR224C SLX5P32828 619 aaKnown RBP9.85□□□□□ -0.83
RPB8YOR224C BDF1P35817 686 aa9.8□□□□□ -0.84
RPB8YOR224C TIF4632P39936 914 aaKnown RBP9.73□□□□□ -0.85
RPB8YOR224C MGA2P40578 1113 aa9.72□□□□□ -0.85
RPB8YOR224C PSD2P53037 1138 aaKnown RBP9.68□□□□□ -0.86
RPB8YOR224C CST9Q06032 482 aa9.65□□□□□ -0.86
RPB8YOR224C MRM1P25270 412 aa9.59□□□□□ -0.87
RPB8YOR224C TGL3P40308 642 aa9.58□□□□□ -0.88
RPB8YOR224C RTG3P38165 486 aa9.43□□□□□ -0.9
RPB8YOR224C YAP5P40574 245 aa9.35□□□□□ -0.91
RPB8YOR224C RCR1P38212 213 aa9.34□□□□□ -0.91
RPB8YOR224C RQC2Q12532 1038 aaKnown RBP9.34□□□□□ -0.91
RPB8YOR224C YOR238WQ08634 303 aa9.33□□□□□ -0.92
RPB8YOR224C PIB1Q06651 286 aa9.3□□□□□ -0.92
RPB8YOR224C NSR1P27476 414 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
RPB8YOR224C YMR1P47147 688 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
RPB8YOR224C VPS29P38759 282 aa9.26□□□□□ -0.93
RPB8YOR224C DMA1P38823 416 aa9.25□□□□□ -0.93
RPB8YOR224C YFR006WP43590 535 aa9.25□□□□□ -0.93
RPB8YOR224C DBP1P24784 617 aaKnown RBP9.24□□□□□ -0.93
RPB8YOR224C GTT3P39996 337 aa9.22□□□□□ -0.93
RPB8YOR224C RAM2P29703 316 aa9.21□□□□□ -0.94
RPB8YOR224C STS1P38637 319 aa9.17□□□□□ -0.94
RPB8YOR224C UBP9P39967 754 aa9.17□□□□□ -0.94
RPB8YOR224C MST1P07236 462 aa9.16□□□□□ -0.94
RPB8YOR224C MAK11P20484 414 aaKnown RBP9.12□□□□□ -0.95
RPB8YOR224C MIF2P35201 549 aa9.11□□□□□ -0.95
RPB8YOR224C WSC3Q12215 556 aa9.1□□□□□ -0.95
RPB8YOR224C YBL029C-AQ3E756 94 aa9.05□□□□□ -0.96
RPB8YOR224C VMA1P17255 1071 aaKnown RBP9.03□□□□□ -0.96
RPB8YOR224C BUD31P25337 157 aaPredicted RBP9.03□□□□□ -0.96
RPB8YOR224C COQ8P27697 501 aa9.02□□□□□ -0.97
RPB8YOR224C SET1P38827 1080 aaKnown RBP9□□□□□ -0.97
RPB8YOR224C SET4P42948 560 aa8.96□□□□□ -0.98
RPB8YOR224C VNX1P42839 908 aa8.95□□□□□ -0.98
RPB8YOR224C SPP1Q03012 353 aa8.95□□□□□ -0.98
RPB8YOR224C EDS1P38073 919 aa8.93□□□□□ -0.98
RPB8YOR224C YOL036WQ08206 761 aa8.93□□□□□ -0.98
RPB8YOR224C GYP5Q12344 894 aa8.92□□□□□ -0.98
RPB8YOR224C PTC3P34221 468 aaKnown RBP8.91□□□□□ -0.98
RPB8YOR224C ATH1P48016 1211 aa8.9□□□□□ -0.98
RPB8YOR224C SAM3Q08986 587 aa8.9□□□□□ -0.98
RPB8YOR224C GRE2Q12068 342 aaKnown RBP8.89□□□□□ -0.99
RPB8YOR224C MSB4Q12317 492 aa8.88□□□□□ -0.99
RPB8YOR224C DCW1P36091 449 aa8.87□□□□□ -0.99
RPB8YOR224C TIF11P38912 153 aaKnown RBP8.86□□□□□ -0.99
RPB8YOR224C EAP1P36041 632 aaKnown RBP8.85□□□□□ -0.99
RPB8YOR224C ULI1P43604 169 aa8.85□□□□□ -0.99
RPB8YOR224C NOP53Q12080 455 aaKnown RBP8.83□□□□□ -1
RPB8YOR224C IFH1P39520 1085 aa8.82□□□□□ -1
RPB8YOR224C HTA1P04911 132 aaKnown RBP8.81□□□□□ -1
RPB8YOR224C HTA2P04912 132 aa8.81□□□□□ -1
RPB8YOR224C ABP1P15891 592 aaKnown RBP8.81□□□□□ -1
RPB8YOR224C SIS1P25294 352 aaKnown RBP8.8□□□□□ -1
RPB8YOR224C GUT1P32190 709 aa8.8□□□□□ -1
RPB8YOR224C VPS70P47161 811 aa8.8□□□□□ -1
RPB8YOR224C TRP5P00931 707 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms