RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C ULI1P43604 169 aa8.89□□□□□ -0.99
ATG16YMR159C TRP5P00931 707 aaKnown RBP8.88□□□□□ -0.99
ATG16YMR159C REF2P42073 533 aaPredicted RBP8.88□□□□□ -0.99
ATG16YMR159C SOL3P38858 249 aa8.87□□□□□ -0.99
ATG16YMR159C YGR273CP53329 174 aa8.87□□□□□ -0.99
ATG16YMR159C IOC2Q12072 812 aa8.87□□□□□ -0.99
ATG16YMR159C NST1P53935 1240 aa8.85□□□□□ -0.99
ATG16YMR159C JIP4Q03361 876 aa8.84□□□□□ -0.99
ATG16YMR159C PTC4P38089 393 aa8.82□□□□□ -1
ATG16YMR159C UBP14P38237 781 aaKnown RBP8.82□□□□□ -1
ATG16YMR159C YEL023CP39992 682 aa8.82□□□□□ -1
ATG16YMR159C PBS2P08018 668 aa8.81□□□□□ -1
ATG16YMR159C MAK21Q12176 1025 aaKnown RBP8.81□□□□□ -1
ATG16YMR159C AI4P03878 556 aa8.8□□□□□ -1
ATG16YMR159C LEU3P08638 886 aa8.8□□□□□ -1
ATG16YMR159C MPH3P0CE00 602 aa8.8□□□□□ -1
ATG16YMR159C SPB4P25808 606 aaPredicted RBP8.8□□□□□ -1
ATG16YMR159C DSF2P38213 736 aa8.79□□□□□ -1
ATG16YMR159C YNL035CP53962 389 aaKnown RBP8.79□□□□□ -1
ATG16YMR159C YLR326WQ06170 240 aaKnown RBP8.78□□□□□ -1
ATG16YMR159C LDB19Q12502 818 aa8.78□□□□□ -1
ATG16YMR159C VHR2P40041 505 aa8.77□□□□□ -1.01
ATG16YMR159C DAN4P47179 1161 aa8.77□□□□□ -1.01
ATG16YMR159C COX6P00427 148 aa8.76□□□□□ -1.01
ATG16YMR159C KEX1P09620 729 aa8.76□□□□□ -1.01
ATG16YMR159C SEC61P32915 480 aa8.74□□□□□ -1.01
ATG16YMR159C YDR090CQ03193 310 aa8.74□□□□□ -1.01
ATG16YMR159C RTG1P32607 177 aa8.73□□□□□ -1.01
ATG16YMR159C RAD54P32863 898 aa8.71□□□□□ -1.02
ATG16YMR159C ILV3P39522 585 aaKnown RBP8.71□□□□□ -1.02
ATG16YMR159C MAM3Q12296 706 aa8.7□□□□□ -1.02
ATG16YMR159C KIC1P38692 1080 aa8.69□□□□□ -1.02
ATG16YMR159C FKH1P40466 484 aa8.69□□□□□ -1.02
ATG16YMR159C PCS60P38137 543 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
ATG16YMR159C NCR1Q12200 1170 aa8.67□□□□□ -1.02
ATG16YMR159C SIS1P25294 352 aaKnown RBP8.66□□□□□ -1.02
ATG16YMR159C SLI15P38283 698 aa8.64□□□□□ -1.03
ATG16YMR159C TFG1P41895 735 aaPredicted RBP8.64□□□□□ -1.03
ATG16YMR159C AIR2Q12476 344 aaKnown RBP8.63□□□□□ -1.03
ATG16YMR159C IES2P40154 320 aa8.62□□□□□ -1.03
ATG16YMR159C NUP42P49686 430 aaKnown RBP8.61□□□□□ -1.03
ATG16YMR159C PML39Q03760 334 aa8.61□□□□□ -1.03
ATG16YMR159C YDL129WQ07555 291 aa8.61□□□□□ -1.03
ATG16YMR159C LEO1P38439 464 aa8.6□□□□□ -1.03
ATG16YMR159C RPP1BP10622 106 aaKnown RBP8.58□□□□□ -1.04
ATG16YMR159C RPN1P38764 993 aaKnown RBP8.58□□□□□ -1.04
ATG16YMR159C YNR021WP53723 404 aaKnown RBP8.58□□□□□ -1.04
ATG16YMR159C MID1P41821 548 aa8.56□□□□□ -1.04
ATG16YMR159C ORC6P38826 435 aa8.55□□□□□ -1.04
ATG16YMR159C DIT2P21595 489 aa8.54□□□□□ -1.04
ATG16YMR159C PSE1P32337 1089 aaKnown RBP8.53□□□□□ -1.04
ATG16YMR159C GAP1P19145 602 aaPredicted RBP8.52□□□□□ -1.05
ATG16YMR159C DPL1Q05567 589 aa8.52□□□□□ -1.05
ATG16YMR159C CSC1Q06538 782 aa8.51□□□□□ -1.05
ATG16YMR159C MPC54Q08550 464 aa8.51□□□□□ -1.05
ATG16YMR159C SAP30P38429 201 aa8.5□□□□□ -1.05
ATG16YMR159C YJL171CP46992 396 aa8.5□□□□□ -1.05
ATG16YMR159C CDC73Q06697 393 aa8.5□□□□□ -1.05
ATG16YMR159C PEX29Q03370 554 aa8.49□□□□□ -1.05
ATG16YMR159C BMT6Q12291 365 aa8.49□□□□□ -1.05
ATG16YMR159C AIM7Q12156 149 aa8.48□□□□□ -1.05
ATG16YMR159C TFB4Q12004 338 aa8.47□□□□□ -1.05
ATG16YMR159C RGR1P19263 1082 aa8.46□□□□□ -1.06
ATG16YMR159C ISU2Q12056 156 aa8.46□□□□□ -1.06
ATG16YMR159C MVP1P40959 511 aaKnown RBP8.45□□□□□ -1.06
ATG16YMR159C ARH1P48360 493 aa8.45□□□□□ -1.06
ATG16YMR159C GLC3P32775 704 aa8.44□□□□□ -1.06
ATG16YMR159C NMA111P53920 997 aa8.44□□□□□ -1.06
ATG16YMR159C ATF2P53296 535 aa8.43□□□□□ -1.06
ATG16YMR159C CLB5P30283 435 aa8.41□□□□□ -1.06
ATG16YMR159C PEX21P50091 288 aa8.41□□□□□ -1.06
ATG16YMR159C HAP5Q02516 242 aa8.41□□□□□ -1.06
ATG16YMR159C ELP4Q02884 456 aaKnown RBP8.38□□□□□ -1.07
ATG16YMR159C YPR109WQ06104 294 aa8.38□□□□□ -1.07
ATG16YMR159C KIN1P13185 1064 aa8.37□□□□□ -1.07
ATG16YMR159C PRE3P38624 215 aa8.37□□□□□ -1.07
ATG16YMR159C TEA1P47988 759 aa8.37□□□□□ -1.07
ATG16YMR159C BNI4P53858 892 aa8.36□□□□□ -1.07
ATG16YMR159C YDR344CQ05510 147 aa8.36□□□□□ -1.07
ATG16YMR159C TUM1Q08686 304 aaKnown RBP8.36□□□□□ -1.07
ATG16YMR159C CHL1P22516 861 aaPredicted RBP8.35□□□□□ -1.07
ATG16YMR159C SPT23P35210 1082 aa8.35□□□□□ -1.07
ATG16YMR159C YRR1Q12172 810 aa8.34□□□□□ -1.07
ATG16YMR159C YML082WQ04533 649 aaKnown RBP8.28□□□□□ -1.08
ATG16YMR159C PTC2P39966 464 aaKnown RBP8.27□□□□□ -1.09
ATG16YMR159C PDR1P12383 1068 aa8.26□□□□□ -1.09
ATG16YMR159C SIT4P20604 311 aa8.25□□□□□ -1.09
ATG16YMR159C RAM1P22007 431 aa8.25□□□□□ -1.09
ATG16YMR159C NIS1P53939 407 aa8.25□□□□□ -1.09
ATG16YMR159C NUD1P32336 851 aa8.24□□□□□ -1.09
ATG16YMR159C HST2P53686 357 aa8.22□□□□□ -1.09
ATG16YMR159C FPK1P53739 893 aa8.22□□□□□ -1.09
ATG16YMR159C NPL4P33755 580 aa8.21□□□□□ -1.1
ATG16YMR159C CSN12P47130 423 aa8.21□□□□□ -1.1
ATG16YMR159C RTF1P53064 558 aa8.21□□□□□ -1.1
ATG16YMR159C YMR196WQ04336 1088 aa8.2□□□□□ -1.1
ATG16YMR159C GUA1P38625 525 aaKnown RBP8.19□□□□□ -1.1
ATG16YMR159C STR2P47164 639 aa8.19□□□□□ -1.1
ATG16YMR159C ISM1P48526 1002 aa8.19□□□□□ -1.1
ATG16YMR159C SSA2P10592 639 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms