RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C MTC1P47018 478 aaKnown RBP14.81□□□□□ -0.04
ATG16YMR159C DRS1P32892 752 aaKnown RBP14.63□□□□□ -0.07
ATG16YMR159C BFR2Q06631 534 aaKnown RBP12.57□□□□□ -0.4
ATG16YMR159C DIP2Q12220 943 aaPredicted RBP12.54□□□□□ -0.4
ATG16YMR159C AVT3P36062 692 aa12.34□□□□□ -0.43
ATG16YMR159C FAP1P53971 965 aa12.3□□□□□ -0.44
ATG16YMR159C ISW2Q08773 1120 aa12.09□□□□□ -0.47
ATG16YMR159C PRI1P10363 409 aa12□□□□□ -0.49
ATG16YMR159C RSE1Q04693 1361 aaKnown RBP11.91□□□□□ -0.5
ATG16YMR159C RPG1P38249 964 aaKnown RBP11.9□□□□□ -0.5
ATG16YMR159C AAD16Q02895 342 aa11.83□□□□□ -0.52
ATG16YMR159C TFA1P36100 482 aa11.74□□□□□ -0.53
ATG16YMR159C PRY3P47033 881 aa11.51□□□□□ -0.57
ATG16YMR159C RPL17AP05740 184 aaKnown RBP11.44□□□□□ -0.58
ATG16YMR159C RPL17BP46990 184 aaKnown RBP11.44□□□□□ -0.58
ATG16YMR159C TSR3Q12094 313 aaKnown RBP11.34□□□□□ -0.59
ATG16YMR159C REB1P21538 810 aa11.32□□□□□ -0.6
ATG16YMR159C SPT21P35209 758 aa11.04□□□□□ -0.64
ATG16YMR159C MRPL32P25348 183 aa10.94□□□□□ -0.66
ATG16YMR159C HAA1Q12753 694 aaKnown RBP10.94□□□□□ -0.66
ATG16YMR159C YCK3P39962 524 aa10.91□□□□□ -0.66
ATG16YMR159C RIM101P33400 625 aa10.87□□□□□ -0.67
ATG16YMR159C YKR023WP36119 530 aaKnown RBP10.71□□□□□ -0.69
ATG16YMR159C CDC27P38042 758 aa10.51□□□□□ -0.73
ATG16YMR159C TFC8Q12308 588 aa10.5□□□□□ -0.73
ATG16YMR159C OXP1P28273 1286 aa10.49□□□□□ -0.73
ATG16YMR159C HOP09932 586 aa10.44□□□□□ -0.74
ATG16YMR159C DCD1P06773 312 aa10.34□□□□□ -0.75
ATG16YMR159C YIL055CP40523 627 aaKnown RBP10.34□□□□□ -0.75
ATG16YMR159C YGL015CP33199 130 aa10.29□□□□□ -0.76
ATG16YMR159C SSP1P38871 571 aa10.28□□□□□ -0.76
ATG16YMR159C PTP3P40048 928 aa10.27□□□□□ -0.77
ATG16YMR159C YAH1Q12184 172 aaKnown RBP10.25□□□□□ -0.77
ATG16YMR159C RSM7P47150 247 aa10.2□□□□□ -0.78
ATG16YMR159C UBP10P53874 792 aaPredicted RBP10.19□□□□□ -0.78
ATG16YMR159C BCH2P36122 765 aa10.17□□□□□ -0.78
ATG16YMR159C YLR271WQ06152 274 aa10.16□□□□□ -0.78
ATG16YMR159C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
ATG16YMR159C MAP2P38174 421 aaKnown RBP10.09□□□□□ -0.79
ATG16YMR159C SCY1P53009 804 aa10.03□□□□□ -0.8
ATG16YMR159C AI2P03876 854 aa10.02□□□□□ -0.81
ATG16YMR159C EPS1P40557 701 aa9.99□□□□□ -0.81
ATG16YMR159C BBC1P47068 1157 aa9.99□□□□□ -0.81
ATG16YMR159C MGA2P40578 1113 aa9.95□□□□□ -0.82
ATG16YMR159C BDF1P35817 686 aa9.93□□□□□ -0.82
ATG16YMR159C PSD2P53037 1138 aaKnown RBP9.93□□□□□ -0.82
ATG16YMR159C SLX5P32828 619 aaKnown RBP9.89□□□□□ -0.83
ATG16YMR159C CST9Q06032 482 aa9.83□□□□□ -0.84
ATG16YMR159C RQC2Q12532 1038 aaKnown RBP9.78□□□□□ -0.84
ATG16YMR159C TIF4632P39936 914 aaKnown RBP9.74□□□□□ -0.85
ATG16YMR159C TGL3P40308 642 aa9.7□□□□□ -0.86
ATG16YMR159C MRM1P25270 412 aa9.69□□□□□ -0.86
ATG16YMR159C RTG3P38165 486 aa9.6□□□□□ -0.87
ATG16YMR159C NSR1P27476 414 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
ATG16YMR159C DMA1P38823 416 aa9.54□□□□□ -0.88
ATG16YMR159C VPS29P38759 282 aa9.5□□□□□ -0.89
ATG16YMR159C RCR1P38212 213 aa9.49□□□□□ -0.89
ATG16YMR159C RAM2P29703 316 aa9.47□□□□□ -0.89
ATG16YMR159C YAP5P40574 245 aa9.46□□□□□ -0.9
ATG16YMR159C YMR1P47147 688 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
ATG16YMR159C MST1P07236 462 aa9.41□□□□□ -0.9
ATG16YMR159C YOR238WQ08634 303 aa9.4□□□□□ -0.9
ATG16YMR159C MAK11P20484 414 aaKnown RBP9.38□□□□□ -0.91
ATG16YMR159C DBP1P24784 617 aaKnown RBP9.35□□□□□ -0.91
ATG16YMR159C STS1P38637 319 aa9.34□□□□□ -0.91
ATG16YMR159C YFR006WP43590 535 aa9.28□□□□□ -0.92
ATG16YMR159C PIB1Q06651 286 aa9.25□□□□□ -0.93
ATG16YMR159C SET1P38827 1080 aaKnown RBP9.23□□□□□ -0.93
ATG16YMR159C NOP53Q12080 455 aaKnown RBP9.23□□□□□ -0.93
ATG16YMR159C COQ8P27697 501 aa9.22□□□□□ -0.93
ATG16YMR159C VMA1P17255 1071 aaKnown RBP9.2□□□□□ -0.94
ATG16YMR159C GTT3P39996 337 aa9.19□□□□□ -0.94
ATG16YMR159C SAS10Q12136 610 aaPredicted RBP9.19□□□□□ -0.94
ATG16YMR159C MIF2P35201 549 aa9.18□□□□□ -0.94
ATG16YMR159C SAM3Q08986 587 aa9.17□□□□□ -0.94
ATG16YMR159C EDS1P38073 919 aa9.16□□□□□ -0.94
ATG16YMR159C IFH1P39520 1085 aa9.16□□□□□ -0.94
ATG16YMR159C UBP9P39967 754 aa9.14□□□□□ -0.95
ATG16YMR159C YPR148CQ06523 435 aa9.12□□□□□ -0.95
ATG16YMR159C PTC3P34221 468 aaKnown RBP9.11□□□□□ -0.95
ATG16YMR159C MSB4Q12317 492 aa9.07□□□□□ -0.96
ATG16YMR159C ABP1P15891 592 aaKnown RBP9.05□□□□□ -0.96
ATG16YMR159C YOL036WQ08206 761 aa9.05□□□□□ -0.96
ATG16YMR159C BUD31P25337 157 aaPredicted RBP9.04□□□□□ -0.96
ATG16YMR159C GYP5Q12344 894 aa9.04□□□□□ -0.96
ATG16YMR159C VNX1P42839 908 aa9.03□□□□□ -0.96
ATG16YMR159C GRE2Q12068 342 aaKnown RBP9.03□□□□□ -0.96
ATG16YMR159C YBL029C-AQ3E756 94 aa9.03□□□□□ -0.96
ATG16YMR159C GUT1P32190 709 aa9.02□□□□□ -0.97
ATG16YMR159C WSC3Q12215 556 aa9.02□□□□□ -0.97
ATG16YMR159C ATH1P48016 1211 aa9.01□□□□□ -0.97
ATG16YMR159C SET4P42948 560 aa9□□□□□ -0.97
ATG16YMR159C CKB1P43639 278 aa8.99□□□□□ -0.97
ATG16YMR159C VPS70P47161 811 aa8.99□□□□□ -0.97
ATG16YMR159C EAP1P36041 632 aaKnown RBP8.98□□□□□ -0.97
ATG16YMR159C TIF11P38912 153 aaKnown RBP8.96□□□□□ -0.98
ATG16YMR159C HTA1P04911 132 aaKnown RBP8.93□□□□□ -0.98
ATG16YMR159C HTA2P04912 132 aa8.93□□□□□ -0.98
ATG16YMR159C SPP1Q03012 353 aa8.93□□□□□ -0.98
ATG16YMR159C DCW1P36091 449 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms