RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C EDS1P38073 919 aa7.03□□□□□ -1.28
VBA1YMR088C NOP53Q12080 455 aaKnown RBP7.03□□□□□ -1.28
VBA1YMR088C TCB2P48231 1178 aa7.02□□□□□ -1.29
VBA1YMR088C HSP82P02829 709 aaKnown RBP7.01□□□□□ -1.29
VBA1YMR088C SPT2P06843 333 aaPredicted RBP7□□□□□ -1.29
VBA1YMR088C FPR3P38911 411 aaKnown RBP7□□□□□ -1.29
VBA1YMR088C PIB1Q06651 286 aa7□□□□□ -1.29
VBA1YMR088C PLP2Q12017 286 aa7□□□□□ -1.29
VBA1YMR088C SPB4P25808 606 aaPredicted RBP6.99□□□□□ -1.29
VBA1YMR088C RLF2Q12495 606 aa6.99□□□□□ -1.29
VBA1YMR088C GIN4Q12263 1142 aa6.96□□□□□ -1.29
VBA1YMR088C HIF1Q12373 385 aa6.96□□□□□ -1.29
VBA1YMR088C TOA1P32773 286 aa6.96□□□□□ -1.3
VBA1YMR088C RPS0AP32905 252 aaKnown RBP6.96□□□□□ -1.3
VBA1YMR088C PTC3P34221 468 aaKnown RBP6.96□□□□□ -1.3
VBA1YMR088C RPN1P38764 993 aaKnown RBP6.96□□□□□ -1.3
VBA1YMR088C VMA1P17255 1071 aaKnown RBP6.95□□□□□ -1.3
VBA1YMR088C QCR6P00127 147 aa6.93□□□□□ -1.3
VBA1YMR088C MST1P07236 462 aa6.93□□□□□ -1.3
VBA1YMR088C PBS2P08018 668 aa6.92□□□□□ -1.3
VBA1YMR088C DSF2P38213 736 aa6.92□□□□□ -1.3
VBA1YMR088C ENP1P38333 483 aaKnown RBP6.92□□□□□ -1.3
VBA1YMR088C SUB1P54000 292 aaKnown RBP6.91□□□□□ -1.3
VBA1YMR088C SPT7P35177 1332 aa6.91□□□□□ -1.3
VBA1YMR088C SWE1P32944 819 aa6.9□□□□□ -1.3
VBA1YMR088C BRL1P38770 471 aa6.9□□□□□ -1.3
VBA1YMR088C FUN12P39730 1002 aaKnown RBP6.9□□□□□ -1.3
VBA1YMR088C UBP9P39967 754 aa6.9□□□□□ -1.31
VBA1YMR088C REF2P42073 533 aaPredicted RBP6.89□□□□□ -1.31
VBA1YMR088C RNA1P11745 407 aaKnown RBP6.88□□□□□ -1.31
VBA1YMR088C RIX1P38883 763 aaPredicted RBP6.87□□□□□ -1.31
VBA1YMR088C SAM3Q08986 587 aa6.87□□□□□ -1.31
VBA1YMR088C VPS72Q03388 795 aa6.87□□□□□ -1.31
VBA1YMR088C FPR4Q06205 392 aaPredicted RBP6.87□□□□□ -1.31
VBA1YMR088C GRE2Q12068 342 aaKnown RBP6.86□□□□□ -1.31
VBA1YMR088C NHA1Q99271 985 aa6.86□□□□□ -1.31
VBA1YMR088C ATH1P48016 1211 aa6.85□□□□□ -1.31
VBA1YMR088C GUT1P32190 709 aa6.84□□□□□ -1.31
VBA1YMR088C GTT3P39996 337 aa6.84□□□□□ -1.31
VBA1YMR088C TLG1Q03322 224 aa6.84□□□□□ -1.31
VBA1YMR088C SSA1P10591 642 aaKnown RBP6.84□□□□□ -1.32
VBA1YMR088C SSA2P10592 639 aaKnown RBP6.84□□□□□ -1.32
VBA1YMR088C YGR130CP53278 816 aa6.83□□□□□ -1.32
VBA1YMR088C MAM3Q12296 706 aa6.83□□□□□ -1.32
VBA1YMR088C ASF1P32447 279 aa6.82□□□□□ -1.32
VBA1YMR088C MAK21Q12176 1025 aaKnown RBP6.81□□□□□ -1.32
VBA1YMR088C GYP5Q12344 894 aa6.81□□□□□ -1.32
VBA1YMR088C INO80P53115 1489 aa6.81□□□□□ -1.32
VBA1YMR088C SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
VBA1YMR088C COX6P00427 148 aa6.8□□□□□ -1.32
VBA1YMR088C IES2P40154 320 aa6.8□□□□□ -1.32
VBA1YMR088C PIL1P53252 339 aaKnown RBP6.8□□□□□ -1.32
VBA1YMR088C VHR2P40041 505 aa6.79□□□□□ -1.32
VBA1YMR088C UBP14P38237 781 aaKnown RBP6.78□□□□□ -1.32
VBA1YMR088C MPP10P47083 593 aaKnown RBP6.78□□□□□ -1.32
VBA1YMR088C YNR021WP53723 404 aaKnown RBP6.78□□□□□ -1.32
VBA1YMR088C YNL011CP53980 444 aa6.78□□□□□ -1.32
VBA1YMR088C YOL036WQ08206 761 aa6.78□□□□□ -1.32
VBA1YMR088C YGR273CP53329 174 aa6.77□□□□□ -1.32
VBA1YMR088C DMA2P53924 522 aa6.77□□□□□ -1.32
VBA1YMR088C GRX3Q03835 250 aa6.77□□□□□ -1.32
VBA1YMR088C BRN1P38170 754 aa6.77□□□□□ -1.33
VBA1YMR088C NMD2P38798 1089 aaKnown RBP6.77□□□□□ -1.33
VBA1YMR088C NUP42P49686 430 aaKnown RBP6.77□□□□□ -1.33
VBA1YMR088C YDR090CQ03193 310 aa6.77□□□□□ -1.33
VBA1YMR088C YTA7P40340 1379 aa6.76□□□□□ -1.33
VBA1YMR088C ABP1P15891 592 aaKnown RBP6.76□□□□□ -1.33
VBA1YMR088C SOL3P38858 249 aa6.76□□□□□ -1.33
VBA1YMR088C SET4P42948 560 aa6.76□□□□□ -1.33
VBA1YMR088C TPO2P53283 614 aa6.76□□□□□ -1.33
VBA1YMR088C YLR326WQ06170 240 aaKnown RBP6.76□□□□□ -1.33
VBA1YMR088C SPC110P32380 944 aa6.75□□□□□ -1.33
VBA1YMR088C DIT2P21595 489 aa6.74□□□□□ -1.33
VBA1YMR088C DCW1P36091 449 aa6.74□□□□□ -1.33
VBA1YMR088C YBL029C-AQ3E756 94 aa6.74□□□□□ -1.33
VBA1YMR088C ATG36P46983 293 aa6.74□□□□□ -1.33
VBA1YMR088C YSH1Q06224 779 aaPredicted RBP6.74□□□□□ -1.33
VBA1YMR088C GLC3P32775 704 aa6.73□□□□□ -1.33
VBA1YMR088C MSB4Q12317 492 aa6.73□□□□□ -1.33
VBA1YMR088C SIS1P25294 352 aaKnown RBP6.72□□□□□ -1.33
VBA1YMR088C OSW7P43611 510 aa6.72□□□□□ -1.33
VBA1YMR088C NST1P53935 1240 aa6.72□□□□□ -1.33
VBA1YMR088C HTA1P04911 132 aaKnown RBP6.71□□□□□ -1.33
VBA1YMR088C HTA2P04912 132 aa6.71□□□□□ -1.33
VBA1YMR088C KEX1P09620 729 aa6.71□□□□□ -1.33
VBA1YMR088C WSC3Q12215 556 aa6.71□□□□□ -1.33
VBA1YMR088C AIM7Q12156 149 aa6.71□□□□□ -1.34
VBA1YMR088C KIN1P13185 1064 aa6.7□□□□□ -1.34
VBA1YMR088C VPS4P52917 437 aa6.7□□□□□ -1.34
VBA1YMR088C HSC82P15108 705 aaKnown RBP6.69□□□□□ -1.34
VBA1YMR088C RAD54P32863 898 aa6.69□□□□□ -1.34
VBA1YMR088C PCS60P38137 543 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
VBA1YMR088C ISW1P38144 1129 aa6.69□□□□□ -1.34
VBA1YMR088C KIC1P38692 1080 aa6.69□□□□□ -1.34
VBA1YMR088C RTS3P53289 263 aa6.69□□□□□ -1.34
VBA1YMR088C VNX1P42839 908 aa6.68□□□□□ -1.34
VBA1YMR088C NNF2P53253 936 aa6.68□□□□□ -1.34
VBA1YMR088C CDC11P32458 415 aa6.67□□□□□ -1.34
VBA1YMR088C NAB3P38996 802 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
VBA1YMR088C YMR196WQ04336 1088 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms