RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W ULI1P43604 169 aa11.09□□□□□ -0.63
TAF4YMR005W REF2P42073 533 aaPredicted RBP11.08□□□□□ -0.64
TAF4YMR005W TRP5P00931 707 aaKnown RBP11.06□□□□□ -0.64
TAF4YMR005W YGR273CP53329 174 aa11.06□□□□□ -0.64
TAF4YMR005W SPB4P25808 606 aaPredicted RBP11.05□□□□□ -0.64
TAF4YMR005W SOL3P38858 249 aa11.04□□□□□ -0.64
TAF4YMR005W PBS2P08018 668 aa11.02□□□□□ -0.65
TAF4YMR005W YEL023CP39992 682 aa11.01□□□□□ -0.65
TAF4YMR005W IOC2Q12072 812 aa11□□□□□ -0.65
TAF4YMR005W LEU3P08638 886 aa10.99□□□□□ -0.65
TAF4YMR005W VHR2P40041 505 aa10.99□□□□□ -0.65
TAF4YMR005W NST1P53935 1240 aa10.99□□□□□ -0.65
TAF4YMR005W UBP14P38237 781 aaKnown RBP10.97□□□□□ -0.65
TAF4YMR005W JIP4Q03361 876 aa10.97□□□□□ -0.65
TAF4YMR005W DSF2P38213 736 aa10.96□□□□□ -0.65
TAF4YMR005W MAK21Q12176 1025 aaKnown RBP10.96□□□□□ -0.65
TAF4YMR005W PTC4P38089 393 aa10.95□□□□□ -0.66
TAF4YMR005W YLR326WQ06170 240 aaKnown RBP10.95□□□□□ -0.66
TAF4YMR005W LDB19Q12502 818 aa10.95□□□□□ -0.66
TAF4YMR005W AI4P03878 556 aa10.94□□□□□ -0.66
TAF4YMR005W KEX1P09620 729 aa10.93□□□□□ -0.66
TAF4YMR005W MPH3P0CE00 602 aa10.93□□□□□ -0.66
TAF4YMR005W YNL035CP53962 389 aaKnown RBP10.92□□□□□ -0.66
TAF4YMR005W COX6P00427 148 aa10.91□□□□□ -0.66
TAF4YMR005W YDR090CQ03193 310 aa10.9□□□□□ -0.66
TAF4YMR005W MAM3Q12296 706 aa10.89□□□□□ -0.67
TAF4YMR005W RTG1P32607 177 aa10.88□□□□□ -0.67
TAF4YMR005W RAD54P32863 898 aa10.88□□□□□ -0.67
TAF4YMR005W DAN4P47179 1161 aa10.88□□□□□ -0.67
TAF4YMR005W KIC1P38692 1080 aa10.87□□□□□ -0.67
TAF4YMR005W ILV3P39522 585 aaKnown RBP10.87□□□□□ -0.67
TAF4YMR005W SEC61P32915 480 aa10.84□□□□□ -0.67
TAF4YMR005W PCS60P38137 543 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
TAF4YMR005W IES2P40154 320 aa10.81□□□□□ -0.68
TAF4YMR005W SIS1P25294 352 aaKnown RBP10.8□□□□□ -0.68
TAF4YMR005W FKH1P40466 484 aa10.8□□□□□ -0.68
TAF4YMR005W TFG1P41895 735 aaPredicted RBP10.78□□□□□ -0.68
TAF4YMR005W NCR1Q12200 1170 aa10.78□□□□□ -0.68
TAF4YMR005W SLI15P38283 698 aa10.76□□□□□ -0.69
TAF4YMR005W PML39Q03760 334 aa10.75□□□□□ -0.69
TAF4YMR005W LEO1P38439 464 aa10.74□□□□□ -0.69
TAF4YMR005W NUP42P49686 430 aaKnown RBP10.73□□□□□ -0.69
TAF4YMR005W RPN1P38764 993 aaKnown RBP10.72□□□□□ -0.69
TAF4YMR005W AIR2Q12476 344 aaKnown RBP10.71□□□□□ -0.69
TAF4YMR005W YNR021WP53723 404 aaKnown RBP10.7□□□□□ -0.7
TAF4YMR005W YDL129WQ07555 291 aa10.7□□□□□ -0.7
TAF4YMR005W DIT2P21595 489 aa10.69□□□□□ -0.7
TAF4YMR005W MID1P41821 548 aa10.69□□□□□ -0.7
TAF4YMR005W RPP1BP10622 106 aaKnown RBP10.68□□□□□ -0.7
TAF4YMR005W ORC6P38826 435 aa10.67□□□□□ -0.7
TAF4YMR005W PEX29Q03370 554 aa10.65□□□□□ -0.7
TAF4YMR005W CDC73Q06697 393 aa10.63□□□□□ -0.71
TAF4YMR005W PSE1P32337 1089 aaKnown RBP10.62□□□□□ -0.71
TAF4YMR005W GLC3P32775 704 aa10.61□□□□□ -0.71
TAF4YMR005W SAP30P38429 201 aa10.61□□□□□ -0.71
TAF4YMR005W DPL1Q05567 589 aa10.61□□□□□ -0.71
TAF4YMR005W MPC54Q08550 464 aa10.61□□□□□ -0.71
TAF4YMR005W YJL171CP46992 396 aa10.59□□□□□ -0.71
TAF4YMR005W CSC1Q06538 782 aa10.59□□□□□ -0.71
TAF4YMR005W GAP1P19145 602 aaPredicted RBP10.58□□□□□ -0.72
TAF4YMR005W BMT6Q12291 365 aa10.57□□□□□ -0.72
TAF4YMR005W AIM7Q12156 149 aa10.56□□□□□ -0.72
TAF4YMR005W ATF2P53296 535 aa10.55□□□□□ -0.72
TAF4YMR005W RGR1P19263 1082 aa10.54□□□□□ -0.72
TAF4YMR005W MVP1P40959 511 aaKnown RBP10.53□□□□□ -0.72
TAF4YMR005W PEX21P50091 288 aa10.53□□□□□ -0.72
TAF4YMR005W TFB4Q12004 338 aa10.53□□□□□ -0.72
TAF4YMR005W NMA111P53920 997 aa10.52□□□□□ -0.73
TAF4YMR005W ISU2Q12056 156 aa10.52□□□□□ -0.73
TAF4YMR005W ARH1P48360 493 aa10.5□□□□□ -0.73
TAF4YMR005W KIN1P13185 1064 aa10.48□□□□□ -0.73
TAF4YMR005W HAP5Q02516 242 aa10.48□□□□□ -0.73
TAF4YMR005W CLB5P30283 435 aa10.47□□□□□ -0.73
TAF4YMR005W ELP4Q02884 456 aaKnown RBP10.46□□□□□ -0.73
TAF4YMR005W TEA1P47988 759 aa10.45□□□□□ -0.74
TAF4YMR005W YDR344CQ05510 147 aa10.45□□□□□ -0.74
TAF4YMR005W YPR109WQ06104 294 aa10.45□□□□□ -0.74
TAF4YMR005W TUM1Q08686 304 aaKnown RBP10.45□□□□□ -0.74
TAF4YMR005W YRR1Q12172 810 aa10.42□□□□□ -0.74
TAF4YMR005W PRE3P38624 215 aa10.4□□□□□ -0.74
TAF4YMR005W BNI4P53858 892 aa10.39□□□□□ -0.75
TAF4YMR005W SPT23P35210 1082 aa10.38□□□□□ -0.75
TAF4YMR005W CHL1P22516 861 aaPredicted RBP10.37□□□□□ -0.75
TAF4YMR005W PDR1P12383 1068 aa10.33□□□□□ -0.76
TAF4YMR005W PTC2P39966 464 aaKnown RBP10.32□□□□□ -0.76
TAF4YMR005W NIS1P53939 407 aa10.31□□□□□ -0.76
TAF4YMR005W NUD1P32336 851 aa10.3□□□□□ -0.76
TAF4YMR005W YMR196WQ04336 1088 aa10.29□□□□□ -0.76
TAF4YMR005W NPL4P33755 580 aa10.26□□□□□ -0.77
TAF4YMR005W GUA1P38625 525 aaKnown RBP10.26□□□□□ -0.77
TAF4YMR005W FPK1P53739 893 aa10.26□□□□□ -0.77
TAF4YMR005W SIT4P20604 311 aa10.25□□□□□ -0.77
TAF4YMR005W RAM1P22007 431 aa10.25□□□□□ -0.77
TAF4YMR005W CSN12P47130 423 aa10.25□□□□□ -0.77
TAF4YMR005W YML082WQ04533 649 aaKnown RBP10.25□□□□□ -0.77
TAF4YMR005W HST2P53686 357 aa10.23□□□□□ -0.77
TAF4YMR005W STR2P47164 639 aa10.22□□□□□ -0.77
TAF4YMR005W SSA2P10592 639 aaKnown RBP10.21□□□□□ -0.77
TAF4YMR005W ISM1P48526 1002 aa10.21□□□□□ -0.77
TAF4YMR005W GLN1P32288 370 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms