RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W MTC1P47018 478 aaKnown RBP18.46■□□□□ 0.55
TAF4YMR005W DRS1P32892 752 aaKnown RBP18.34■□□□□ 0.53
TAF4YMR005W BFR2Q06631 534 aaKnown RBP15.78■□□□□ 0.12
TAF4YMR005W DIP2Q12220 943 aaPredicted RBP15.68■□□□□ 0.1
TAF4YMR005W AVT3P36062 692 aa15.41■□□□□ 0.06
TAF4YMR005W FAP1P53971 965 aa15.38■□□□□ 0.05
TAF4YMR005W ISW2Q08773 1120 aa15.09■□□□□ 0.01
TAF4YMR005W PRI1P10363 409 aa14.93□□□□□ -0.02
TAF4YMR005W RSE1Q04693 1361 aaKnown RBP14.86□□□□□ -0.03
TAF4YMR005W RPG1P38249 964 aaKnown RBP14.86□□□□□ -0.03
TAF4YMR005W AAD16Q02895 342 aa14.72□□□□□ -0.05
TAF4YMR005W TFA1P36100 482 aa14.7□□□□□ -0.06
TAF4YMR005W PRY3P47033 881 aa14.4□□□□□ -0.1
TAF4YMR005W RPL17AP05740 184 aaKnown RBP14.31□□□□□ -0.12
TAF4YMR005W RPL17BP46990 184 aaKnown RBP14.31□□□□□ -0.12
TAF4YMR005W REB1P21538 810 aa14.17□□□□□ -0.14
TAF4YMR005W TSR3Q12094 313 aaKnown RBP14.17□□□□□ -0.14
TAF4YMR005W SPT21P35209 758 aa13.76□□□□□ -0.21
TAF4YMR005W MRPL32P25348 183 aa13.64□□□□□ -0.23
TAF4YMR005W HAA1Q12753 694 aaKnown RBP13.59□□□□□ -0.23
TAF4YMR005W YCK3P39962 524 aa13.57□□□□□ -0.24
TAF4YMR005W RIM101P33400 625 aa13.53□□□□□ -0.24
TAF4YMR005W YKR023WP36119 530 aaKnown RBP13.35□□□□□ -0.27
TAF4YMR005W CDC27P38042 758 aa13.11□□□□□ -0.31
TAF4YMR005W OXP1P28273 1286 aa13.09□□□□□ -0.31
TAF4YMR005W TFC8Q12308 588 aa13.09□□□□□ -0.31
TAF4YMR005W HOP09932 586 aa13.08□□□□□ -0.32
TAF4YMR005W DCD1P06773 312 aa12.98□□□□□ -0.33
TAF4YMR005W YIL055CP40523 627 aaKnown RBP12.95□□□□□ -0.34
TAF4YMR005W PTP3P40048 928 aa12.94□□□□□ -0.34
TAF4YMR005W YAH1Q12184 172 aaKnown RBP12.89□□□□□ -0.35
TAF4YMR005W SSP1P38871 571 aa12.84□□□□□ -0.35
TAF4YMR005W YGL015CP33199 130 aa12.77□□□□□ -0.37
TAF4YMR005W RSM7P47150 247 aa12.73□□□□□ -0.37
TAF4YMR005W BCH2P36122 765 aa12.7□□□□□ -0.38
TAF4YMR005W YLR271WQ06152 274 aa12.7□□□□□ -0.38
TAF4YMR005W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38not detected
TAF4YMR005W UBP10P53874 792 aaPredicted RBP12.65□□□□□ -0.38
TAF4YMR005W MAP2P38174 421 aaKnown RBP12.59□□□□□ -0.39
TAF4YMR005W SCY1P53009 804 aa12.55□□□□□ -0.4
TAF4YMR005W AI2P03876 854 aa12.52□□□□□ -0.41
TAF4YMR005W BBC1P47068 1157 aa12.49□□□□□ -0.41
TAF4YMR005W EPS1P40557 701 aa12.48□□□□□ -0.41
TAF4YMR005W MGA2P40578 1113 aa12.42□□□□□ -0.42
TAF4YMR005W PSD2P53037 1138 aaKnown RBP12.4□□□□□ -0.42
TAF4YMR005W BDF1P35817 686 aa12.39□□□□□ -0.43
TAF4YMR005W SLX5P32828 619 aaKnown RBP12.34□□□□□ -0.43
TAF4YMR005W CST9Q06032 482 aa12.3□□□□□ -0.44
TAF4YMR005W RQC2Q12532 1038 aaKnown RBP12.29□□□□□ -0.44
TAF4YMR005W TIF4632P39936 914 aaKnown RBP12.14□□□□□ -0.47
TAF4YMR005W MRM1P25270 412 aa12.13□□□□□ -0.47
TAF4YMR005W TGL3P40308 642 aa12.03□□□□□ -0.48
TAF4YMR005W DMA1P38823 416 aa12.01□□□□□ -0.49
TAF4YMR005W RTG3P38165 486 aa11.96□□□□□ -0.49
TAF4YMR005W RCR1P38212 213 aa11.9□□□□□ -0.5
TAF4YMR005W NSR1P27476 414 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
TAF4YMR005W RAM2P29703 316 aa11.83□□□□□ -0.52
TAF4YMR005W VPS29P38759 282 aa11.82□□□□□ -0.52
TAF4YMR005W YAP5P40574 245 aa11.79□□□□□ -0.52
TAF4YMR005W YMR1P47147 688 aaKnown RBP RIP-Chip data11.77□□□□□ -0.53not detected
TAF4YMR005W YOR238WQ08634 303 aa11.73□□□□□ -0.53
TAF4YMR005W MAK11P20484 414 aaKnown RBP11.7□□□□□ -0.54
TAF4YMR005W DBP1P24784 617 aaKnown RBP11.68□□□□□ -0.54
TAF4YMR005W STS1P38637 319 aa11.67□□□□□ -0.54
TAF4YMR005W YFR006WP43590 535 aa11.65□□□□□ -0.54
TAF4YMR005W MST1P07236 462 aa11.64□□□□□ -0.55
TAF4YMR005W PIB1Q06651 286 aa11.62□□□□□ -0.55
TAF4YMR005W SET1P38827 1080 aaKnown RBP11.55□□□□□ -0.56
TAF4YMR005W COQ8P27697 501 aa11.52□□□□□ -0.57
TAF4YMR005W MIF2P35201 549 aa11.5□□□□□ -0.57
TAF4YMR005W GTT3P39996 337 aa11.5□□□□□ -0.57
TAF4YMR005W VMA1P17255 1071 aaKnown RBP11.48□□□□□ -0.57
TAF4YMR005W SAS10Q12136 610 aaPredicted RBP11.45□□□□□ -0.58
TAF4YMR005W EDS1P38073 919 aa11.44□□□□□ -0.58
TAF4YMR005W NOP53Q12080 455 aaKnown RBP11.43□□□□□ -0.58
TAF4YMR005W IFH1P39520 1085 aa11.4□□□□□ -0.58
TAF4YMR005W PTC3P34221 468 aaKnown RBP11.37□□□□□ -0.59
TAF4YMR005W SAM3Q08986 587 aa11.37□□□□□ -0.59
TAF4YMR005W UBP9P39967 754 aa11.36□□□□□ -0.59
TAF4YMR005W YPR148CQ06523 435 aa11.35□□□□□ -0.59
TAF4YMR005W WSC3Q12215 556 aa11.31□□□□□ -0.6
TAF4YMR005W YOL036WQ08206 761 aa11.29□□□□□ -0.6
TAF4YMR005W GRE2Q12068 342 aaKnown RBP11.29□□□□□ -0.6
TAF4YMR005W YBL029C-AQ3E756 94 aa11.29□□□□□ -0.6
TAF4YMR005W VPS70P47161 811 aa11.28□□□□□ -0.6
TAF4YMR005W GYP5Q12344 894 aa11.27□□□□□ -0.61
TAF4YMR005W ATH1P48016 1211 aa11.26□□□□□ -0.61
TAF4YMR005W MSB4Q12317 492 aa11.26□□□□□ -0.61
TAF4YMR005W SET4P42948 560 aa11.25□□□□□ -0.61
TAF4YMR005W VNX1P42839 908 aa11.23□□□□□ -0.61
TAF4YMR005W ABP1P15891 592 aaKnown RBP11.22□□□□□ -0.61
TAF4YMR005W GUT1P32190 709 aa11.22□□□□□ -0.61
TAF4YMR005W BUD31P25337 157 aaPredicted RBP11.21□□□□□ -0.61
TAF4YMR005W CKB1P43639 278 aa11.21□□□□□ -0.61
TAF4YMR005W EAP1P36041 632 aaKnown RBP11.16□□□□□ -0.62
TAF4YMR005W DCW1P36091 449 aa11.16□□□□□ -0.62
TAF4YMR005W SPP1Q03012 353 aa11.15□□□□□ -0.62
TAF4YMR005W TIF11P38912 153 aaKnown RBP11.14□□□□□ -0.63
TAF4YMR005W HTA1P04911 132 aaKnown RBP11.13□□□□□ -0.63
TAF4YMR005W HTA2P04912 132 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms