RNA–Protein interactions for RNA: YLR450W

HMG2, Transcript of HMG-CoA reductase, yeastyeast

Gene HMG2, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMG2YLR450W SNF7P39929 240 aaKnown RBP10.84□□□□□ -0.67
HMG2YLR450W PIL1P53252 339 aaKnown RBP10.83□□□□□ -0.68
HMG2YLR450W SCC2Q04002 1493 aa10.83□□□□□ -0.68
HMG2YLR450W VPS4P52917 437 aa10.82□□□□□ -0.68
HMG2YLR450W MSH3P25336 1018 aa10.82□□□□□ -0.68
HMG2YLR450W CTR9P89105 1077 aa10.82□□□□□ -0.68
HMG2YLR450W MDG1P53885 366 aa10.81□□□□□ -0.68
HMG2YLR450W LEU3P08638 886 aa10.8□□□□□ -0.68
HMG2YLR450W RPO31P04051 1460 aa10.8□□□□□ -0.68
HMG2YLR450W TIF4632P39936 914 aaKnown RBP10.79□□□□□ -0.68
HMG2YLR450W NNF2P53253 936 aa10.78□□□□□ -0.68
HMG2YLR450W ECM16Q04217 1267 aaKnown RBP10.77□□□□□ -0.69
HMG2YLR450W CHD1P32657 1468 aa10.77□□□□□ -0.69
HMG2YLR450W SIC1P38634 284 aa10.76□□□□□ -0.69
HMG2YLR450W MSH4P40965 878 aaPredicted RBP10.76□□□□□ -0.69
HMG2YLR450W TY2B-LR1P0C2J3 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-FP0CX63 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-GR2P0CX64 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-CP25384 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-DR2Q03494 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY1B-DR1Q03855 1755 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-DR3Q07791 1770 aaKnown RBP10.76□□□□□ -0.69
HMG2YLR450W TY2B-OR1Q12113 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-DR1Q12472 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TY2B-OR2Q12501 1770 aa10.76□□□□□ -0.69
HMG2YLR450W TOP1P04786 769 aa10.75□□□□□ -0.69
HMG2YLR450W NOP58Q12499 511 aaKnown RBP10.75□□□□□ -0.69
HMG2YLR450W SMC3P47037 1230 aa10.72□□□□□ -0.69
HMG2YLR450W UFD4P33202 1483 aa10.72□□□□□ -0.69
HMG2YLR450W MMS22Q06164 1454 aa10.72□□□□□ -0.69
HMG2YLR450W YCF1P39109 1515 aaKnown RBP10.72□□□□□ -0.69
HMG2YLR450W YPP1P46951 817 aa10.71□□□□□ -0.69
HMG2YLR450W STU1P38198 1513 aa10.71□□□□□ -0.69
HMG2YLR450W ROX1P25042 368 aa10.71□□□□□ -0.7
HMG2YLR450W CLB5P30283 435 aa10.71□□□□□ -0.7
HMG2YLR450W TY1B-DR3Q99231 1755 aa10.7□□□□□ -0.7
HMG2YLR450W RPS0AP32905 252 aaKnown RBP10.7□□□□□ -0.7
HMG2YLR450W PRP3Q03338 469 aaPredicted RBP10.7□□□□□ -0.7
HMG2YLR450W RKR1Q04781 1562 aa10.69□□□□□ -0.7
HMG2YLR450W RPN7Q06103 429 aaKnown RBP10.69□□□□□ -0.7
HMG2YLR450W YOR1P53049 1477 aa10.69□□□□□ -0.7
HMG2YLR450W YSH1Q06224 779 aaPredicted RBP10.69□□□□□ -0.7
HMG2YLR450W DSN1P40568 576 aa10.68□□□□□ -0.7
HMG2YLR450W SSA1P10591 642 aaKnown RBP10.67□□□□□ -0.7
HMG2YLR450W SSA2P10592 639 aaKnown RBP10.67□□□□□ -0.7
HMG2YLR450W SLN1P39928 1220 aaPredicted RBP10.67□□□□□ -0.7
HMG2YLR450W LTV1P34078 463 aa10.66□□□□□ -0.7
HMG2YLR450W TY2B-BQ12491 1770 aa10.66□□□□□ -0.7
HMG2YLR450W DJP1P40564 432 aa10.65□□□□□ -0.7
HMG2YLR450W TOP2P06786 1428 aaKnown RBP10.64□□□□□ -0.71
HMG2YLR450W TLG1Q03322 224 aa10.64□□□□□ -0.71
HMG2YLR450W HIF1Q12373 385 aa10.63□□□□□ -0.71
HMG2YLR450W TY1B-BRQ12193 1756 aa10.63□□□□□ -0.71
HMG2YLR450W TY1B-GR3Q12316 1755 aa10.63□□□□□ -0.71
HMG2YLR450W TY1B-ORQ92393 1755 aa10.63□□□□□ -0.71
HMG2YLR450W PAP2P53632 584 aaKnown RBP10.63□□□□□ -0.71
HMG2YLR450W NHA1Q99271 985 aa10.63□□□□□ -0.71
HMG2YLR450W SPP41P38904 1435 aa10.62□□□□□ -0.71
HMG2YLR450W TOA1P32773 286 aa10.62□□□□□ -0.71
HMG2YLR450W RRP14P36080 434 aaKnown RBP10.61□□□□□ -0.71
HMG2YLR450W ORC1P54784 914 aaPredicted RBP10.61□□□□□ -0.71
HMG2YLR450W SMC4Q12267 1418 aa10.61□□□□□ -0.71
HMG2YLR450W BMS1Q08965 1183 aaKnown RBP10.61□□□□□ -0.71
HMG2YLR450W TY1B-HO13535 1793 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-DR5P0C2I2 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-DR6P0C2I3 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-LR2P0C2I5 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-LR3P0C2I6 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W TY1B-PR1P0C2I9 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W TY1B-PR2P0C2J0 1756 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-PR3P0C2J1 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W TY1B-JR1P47098 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-ML2Q03434 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W TY1B-ER1Q03612 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-ML1Q04711 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W TY1B-GR2Q12269 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-OLQ12273 1755 aa10.6□□□□□ -0.71
HMG2YLR450W TY1B-PLQ12414 1755 aaKnown RBP10.6□□□□□ -0.71
HMG2YLR450W BPT1P14772 1559 aa10.6□□□□□ -0.71
HMG2YLR450W BYE1P36106 594 aa10.59□□□□□ -0.71
HMG2YLR450W NST1P53935 1240 aa10.59□□□□□ -0.71
HMG2YLR450W SUB1P54000 292 aaKnown RBP10.58□□□□□ -0.72
HMG2YLR450W MYO4P32492 1471 aa10.58□□□□□ -0.72
HMG2YLR450W CBF5P33322 483 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
HMG2YLR450W NOP8Q08287 484 aaPredicted RBP10.57□□□□□ -0.72
HMG2YLR450W TAN1P53072 289 aaPredicted RBP10.57□□□□□ -0.72
HMG2YLR450W MMS1Q06211 1407 aa10.56□□□□□ -0.72
HMG2YLR450W TY1B-AO13527 1196 aaKnown RBP10.56□□□□□ -0.72
HMG2YLR450W MED8P38304 223 aa10.56□□□□□ -0.72
HMG2YLR450W MCM1P11746 286 aa10.54□□□□□ -0.72
HMG2YLR450W ECM1P39715 212 aa10.53□□□□□ -0.72
HMG2YLR450W SAP190P36123 1033 aa10.53□□□□□ -0.72
HMG2YLR450W SUP35P05453 685 aaKnown RBP10.53□□□□□ -0.72
HMG2YLR450W RSC8P43609 557 aaKnown RBP10.51□□□□□ -0.73
HMG2YLR450W RTT106P40161 455 aa10.51□□□□□ -0.73
HMG2YLR450W TRM732Q03496 1420 aa10.5□□□□□ -0.73
HMG2YLR450W SEC9P40357 651 aa10.5□□□□□ -0.73
HMG2YLR450W DEP1P31385 405 aa10.49□□□□□ -0.73
HMG2YLR450W GIN4Q12263 1142 aa10.49□□□□□ -0.73
HMG2YLR450W CDC25P04821 1589 aa10.49□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms