RNA–Protein interactions for RNA: YLR450W

HMG2, Transcript of HMG-CoA reductase, yeast

Gene HMG2, Length 3,138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMG2	YLR450W	RQC2	Q12532	1038 aa	Known RBP	14.32	□□□□□ -0.12
HMG2	YLR450W	BFR2	Q06631	534 aa	Known RBP	14.18	□□□□□ -0.14
HMG2	YLR450W	NOP2	P40991	618 aa	Known RBP	12.97	□□□□□ -0.33
HMG2	YLR450W	URN1	Q06525	465 aa	Known RBP	12.82	□□□□□ -0.36
HMG2	YLR450W	EBP2	P36049	427 aa	Known RBP	12.77	□□□□□ -0.36
HMG2	YLR450W	CAB3	P36076	571 aa		12.75	□□□□□ -0.37
HMG2	YLR450W	SIS2	P36024	562 aa		12.57	□□□□□ -0.4
HMG2	YLR450W	TAF7	Q05021	590 aa		12.45	□□□□□ -0.42
HMG2	YLR450W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.44	□□□□□ -0.42	not detected
HMG2	YLR450W	SGS1	P35187	1447 aa		12.4	□□□□□ -0.42
HMG2	YLR450W	INO80	P53115	1489 aa		12.35	□□□□□ -0.43
HMG2	YLR450W	AVT3	P36062	692 aa		12.33	□□□□□ -0.44
HMG2	YLR450W	YPR148C	Q06523	435 aa		12.24	□□□□□ -0.45
HMG2	YLR450W	YFR016C	P43597	1233 aa	Known RBP	12.2	□□□□□ -0.46
HMG2	YLR450W	TCB3	Q03640	1545 aa	Known RBP	12.19	□□□□□ -0.46
HMG2	YLR450W	TY1B-DR4	Q07793	1604 aa		12.18	□□□□□ -0.46
HMG2	YLR450W	MON2	P48563	1636 aa	Predicted RBP	12.16	□□□□□ -0.46
HMG2	YLR450W	SPA2	P23201	1466 aa	Known RBP	11.96	□□□□□ -0.49
HMG2	YLR450W	RPS0B	P46654	252 aa	Known RBP	11.88	□□□□□ -0.51
HMG2	YLR450W	SSN2	P38931	1420 aa		11.86	□□□□□ -0.51
HMG2	YLR450W	CWC22	P53333	577 aa	Known RBP	11.84	□□□□□ -0.51
HMG2	YLR450W	SWR1	Q05471	1514 aa		11.83	□□□□□ -0.52
HMG2	YLR450W	HSL1	P34244	1518 aa		11.81	□□□□□ -0.52
HMG2	YLR450W	DIP2	Q12220	943 aa	Predicted RBP	11.76	□□□□□ -0.53
HMG2	YLR450W	KRI1	P42846	591 aa	Known RBP	11.75	□□□□□ -0.53
HMG2	YLR450W	SPT6	P23615	1451 aa	Known RBP	11.69	□□□□□ -0.54
HMG2	YLR450W	RSE1	Q04693	1361 aa	Known RBP	11.62	□□□□□ -0.55
HMG2	YLR450W	HIR3	P47171	1648 aa		11.59	□□□□□ -0.55
HMG2	YLR450W	LEO1	P38439	464 aa		11.59	□□□□□ -0.55
HMG2	YLR450W	TCB2	P48231	1178 aa		11.59	□□□□□ -0.55
HMG2	YLR450W	AIM44	Q99299	758 aa		11.58	□□□□□ -0.56
HMG2	YLR450W	SKI3	P17883	1432 aa	Known RBP	11.57	□□□□□ -0.56
HMG2	YLR450W	YRB30	P53107	440 aa	Predicted RBP	11.57	□□□□□ -0.56
HMG2	YLR450W	MNN4	P36044	1178 aa		11.52	□□□□□ -0.57
HMG2	YLR450W	ENV11	P53246	860 aa		11.51	□□□□□ -0.57
HMG2	YLR450W	DEF1	P35732	738 aa	Known RBP	11.44	□□□□□ -0.58
HMG2	YLR450W	DNA2	P38859	1522 aa		11.41	□□□□□ -0.58
HMG2	YLR450W	KOG1	P38873	1557 aa		11.4	□□□□□ -0.58
HMG2	YLR450W	ENP1	P38333	483 aa	Known RBP	11.4	□□□□□ -0.58
HMG2	YLR450W	PSH1	Q12161	406 aa		11.4	□□□□□ -0.58
HMG2	YLR450W	XRN1	P22147	1528 aa	Known RBP	11.38	□□□□□ -0.59
HMG2	YLR450W	TFA1	P36100	482 aa		11.38	□□□□□ -0.59
HMG2	YLR450W	SIN3	P22579	1536 aa		11.37	□□□□□ -0.59
HMG2	YLR450W	SPT21	P35209	758 aa		11.35	□□□□□ -0.59
HMG2	YLR450W	SEC3	P33332	1336 aa	Known RBP	11.34	□□□□□ -0.59
HMG2	YLR450W	NUG1	P40010	520 aa	Known RBP	11.34	□□□□□ -0.59
HMG2	YLR450W	SPT7	P35177	1332 aa		11.33	□□□□□ -0.6
HMG2	YLR450W	CLC1	P17891	233 aa		11.32	□□□□□ -0.6
HMG2	YLR450W	IOC4	Q04213	475 aa		11.31	□□□□□ -0.6
HMG2	YLR450W	REV3	P14284	1504 aa		11.31	□□□□□ -0.6
HMG2	YLR450W	FPR3	P38911	411 aa	Known RBP	11.31	□□□□□ -0.6
HMG2	YLR450W	NAP1	P25293	417 aa	Known RBP	11.31	□□□□□ -0.6
HMG2	YLR450W	THO2	P53552	1597 aa	Known RBP	11.28	□□□□□ -0.6
HMG2	YLR450W	YGR130C	P53278	816 aa		11.28	□□□□□ -0.6
HMG2	YLR450W	NOP53	Q12080	455 aa	Known RBP	11.26	□□□□□ -0.61
HMG2	YLR450W	SSK2	P53599	1579 aa		11.24	□□□□□ -0.61
HMG2	YLR450W	RNA1	P11745	407 aa	Known RBP	11.23	□□□□□ -0.61
HMG2	YLR450W	QCR6	P00127	147 aa		11.22	□□□□□ -0.61
HMG2	YLR450W	DRS1	P32892	752 aa	Known RBP	11.21	□□□□□ -0.61
HMG2	YLR450W	FPR4	Q06205	392 aa	Predicted RBP	11.21	□□□□□ -0.62
HMG2	YLR450W	IME2	P32581	645 aa		11.2	□□□□□ -0.62
HMG2	YLR450W	SPT2	P06843	333 aa	Predicted RBP	11.2	□□□□□ -0.62
HMG2	YLR450W	RLF2	Q12495	606 aa		11.19	□□□□□ -0.62
HMG2	YLR450W	RLP24	Q07915	199 aa	Known RBP	11.18	□□□□□ -0.62
HMG2	YLR450W	ATG2	P53855	1592 aa		11.16	□□□□□ -0.62
HMG2	YLR450W	BUD4	P47136	1447 aa		11.13	□□□□□ -0.63
HMG2	YLR450W	ESP1	Q03018	1630 aa		11.12	□□□□□ -0.63
HMG2	YLR450W	PEP1	P32319	1579 aa		11.1	□□□□□ -0.63
HMG2	YLR450W	SAS10	Q12136	610 aa	Predicted RBP	11.1	□□□□□ -0.63
HMG2	YLR450W	IFH1	P39520	1085 aa		11.08	□□□□□ -0.64
HMG2	YLR450W	FUN12	P39730	1002 aa	Known RBP	11.07	□□□□□ -0.64
HMG2	YLR450W	STH1	P32597	1359 aa		11.04	□□□□□ -0.64
HMG2	YLR450W	PRS1	P32895	427 aa	Known RBP	11.03	□□□□□ -0.64
HMG2	YLR450W	MYO2	P19524	1574 aa	Known RBP	11.02	□□□□□ -0.64
HMG2	YLR450W	ECM5	Q03214	1411 aa		11.02	□□□□□ -0.65
HMG2	YLR450W	SPC110	P32380	944 aa		11	□□□□□ -0.65
HMG2	YLR450W	EAF7	P53911	425 aa	Known RBP	11	□□□□□ -0.65
HMG2	YLR450W	MDS3	P53094	1487 aa		10.99	□□□□□ -0.65
HMG2	YLR450W	GRX3	Q03835	250 aa		10.99	□□□□□ -0.65
HMG2	YLR450W	OPY1	P38271	328 aa		10.98	□□□□□ -0.65
HMG2	YLR450W	SWE1	P32944	819 aa		10.97	□□□□□ -0.65
HMG2	YLR450W	MTC1	P47018	478 aa	Known RBP	10.96	□□□□□ -0.65
HMG2	YLR450W	RIX1	P38883	763 aa	Predicted RBP	10.95	□□□□□ -0.66
HMG2	YLR450W	HSP82	P02829	709 aa	Known RBP	10.95	□□□□□ -0.66
HMG2	YLR450W	NMD2	P38798	1089 aa	Known RBP	10.95	□□□□□ -0.66
HMG2	YLR450W	YTA7	P40340	1379 aa		10.95	□□□□□ -0.66
HMG2	YLR450W	YNL011C	P53980	444 aa		10.94	□□□□□ -0.66
HMG2	YLR450W	YPK9	Q12697	1472 aa		10.94	□□□□□ -0.66
HMG2	YLR450W	CFT1	Q06632	1357 aa	Known RBP	10.92	□□□□□ -0.66
HMG2	YLR450W	RPN1	P38764	993 aa	Known RBP	10.91	□□□□□ -0.66
HMG2	YLR450W	POL5	P39985	1022 aa	Known RBP	10.91	□□□□□ -0.66
HMG2	YLR450W	DOS2	P54858	310 aa		10.91	□□□□□ -0.66
HMG2	YLR450W	RAD26	P40352	1085 aa		10.89	□□□□□ -0.67
HMG2	YLR450W	TAF2	P23255	1407 aa		10.88	□□□□□ -0.67
HMG2	YLR450W	SNU71	P53207	620 aa	Known RBP	10.88	□□□□□ -0.67
HMG2	YLR450W	ETT1	Q08421	412 aa	Known RBP	10.88	□□□□□ -0.67
HMG2	YLR450W	PAF1	P38351	445 aa		10.87	□□□□□ -0.67
HMG2	YLR450W	PLP2	Q12017	286 aa		10.87	□□□□□ -0.67
HMG2	YLR450W	POL1	P13382	1468 aa		10.84	□□□□□ -0.67
HMG2	YLR450W	RPC31	P17890	251 aa		10.84	□□□□□ -0.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms