RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C YPR148CQ06523 435 aa10.76□□□□□ -0.69
NMD4YLR363C SAS10Q12136 610 aaPredicted RBP10.73□□□□□ -0.69
NMD4YLR363C LDB19Q12502 818 aa10.72□□□□□ -0.69
NMD4YLR363C VPS70P47161 811 aa10.68□□□□□ -0.7
NMD4YLR363C YEL023CP39992 682 aa10.67□□□□□ -0.7
NMD4YLR363C JIP4Q03361 876 aa10.67□□□□□ -0.7
NMD4YLR363C YNL035CP53962 389 aaKnown RBP10.66□□□□□ -0.7
NMD4YLR363C PTC4P38089 393 aa10.65□□□□□ -0.7
NMD4YLR363C SOL3P38858 249 aa10.64□□□□□ -0.71
NMD4YLR363C RTG1P32607 177 aa10.63□□□□□ -0.71
NMD4YLR363C YGR273CP53329 174 aa10.62□□□□□ -0.71
NMD4YLR363C FKH1P40466 484 aa10.6□□□□□ -0.71
NMD4YLR363C CKB1P43639 278 aa10.6□□□□□ -0.71
NMD4YLR363C NST1P53935 1240 aa10.6□□□□□ -0.71
NMD4YLR363C SEC61P32915 480 aa10.59□□□□□ -0.71
NMD4YLR363C DAN4P47179 1161 aa10.59□□□□□ -0.71
NMD4YLR363C MPH3P0CE00 602 aa10.56□□□□□ -0.72
NMD4YLR363C AI4P03878 556 aa10.55□□□□□ -0.72
NMD4YLR363C REF2P42073 533 aaPredicted RBP10.55□□□□□ -0.72
NMD4YLR363C NCR1Q12200 1170 aa10.55□□□□□ -0.72
NMD4YLR363C AIR2Q12476 344 aaKnown RBP10.54□□□□□ -0.72
NMD4YLR363C TFG1P41895 735 aaPredicted RBP10.53□□□□□ -0.72
NMD4YLR363C UBP14P38237 781 aaKnown RBP10.5□□□□□ -0.73
NMD4YLR363C VHR2P40041 505 aa10.5□□□□□ -0.73
NMD4YLR363C KEX1P09620 729 aa10.48□□□□□ -0.73
NMD4YLR363C YLR326WQ06170 240 aaKnown RBP10.48□□□□□ -0.73
NMD4YLR363C ILV3P39522 585 aaKnown RBP10.46□□□□□ -0.73
NMD4YLR363C YJL171CP46992 396 aa10.45□□□□□ -0.74
NMD4YLR363C MAK21Q12176 1025 aaKnown RBP10.44□□□□□ -0.74
NMD4YLR363C PBS2P08018 668 aa10.43□□□□□ -0.74
NMD4YLR363C PML39Q03760 334 aa10.43□□□□□ -0.74
NMD4YLR363C YDL129WQ07555 291 aa10.43□□□□□ -0.74
NMD4YLR363C SPB4P25808 606 aaPredicted RBP10.41□□□□□ -0.74
NMD4YLR363C RAD54P32863 898 aa10.41□□□□□ -0.74
NMD4YLR363C YDR090CQ03193 310 aa10.41□□□□□ -0.74
NMD4YLR363C COX6P00427 148 aa10.39□□□□□ -0.75
NMD4YLR363C KIC1P38692 1080 aa10.39□□□□□ -0.75
NMD4YLR363C BMT6Q12291 365 aa10.39□□□□□ -0.75
NMD4YLR363C PCS60P38137 543 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
NMD4YLR363C SLI15P38283 698 aa10.37□□□□□ -0.75
NMD4YLR363C DSF2P38213 736 aa10.36□□□□□ -0.75
NMD4YLR363C SAP30P38429 201 aa10.36□□□□□ -0.75
NMD4YLR363C MID1P41821 548 aa10.35□□□□□ -0.75
NMD4YLR363C PEX29Q03370 554 aa10.3□□□□□ -0.76
NMD4YLR363C MAM3Q12296 706 aa10.3□□□□□ -0.76
NMD4YLR363C RPP1BP10622 106 aaKnown RBP10.27□□□□□ -0.77
NMD4YLR363C MPC54Q08550 464 aa10.25□□□□□ -0.77
NMD4YLR363C DPL1Q05567 589 aa10.24□□□□□ -0.77
NMD4YLR363C CDC73Q06697 393 aa10.22□□□□□ -0.77
NMD4YLR363C IES2P40154 320 aa10.21□□□□□ -0.77
NMD4YLR363C LEU3P08638 886 aa10.2□□□□□ -0.78
NMD4YLR363C ARH1P48360 493 aa10.2□□□□□ -0.78
NMD4YLR363C ORC6P38826 435 aa10.18□□□□□ -0.78
NMD4YLR363C ELP4Q02884 456 aaKnown RBP10.18□□□□□ -0.78
NMD4YLR363C PRE3P38624 215 aa10.17□□□□□ -0.78
NMD4YLR363C NMA111P53920 997 aa10.17□□□□□ -0.78
NMD4YLR363C NUP42P49686 430 aaKnown RBP10.16□□□□□ -0.78
NMD4YLR363C HAP5Q02516 242 aa10.16□□□□□ -0.78
NMD4YLR363C ISU2Q12056 156 aa10.16□□□□□ -0.78
NMD4YLR363C CHL1P22516 861 aaPredicted RBP10.15□□□□□ -0.78
NMD4YLR363C YDR344CQ05510 147 aa10.15□□□□□ -0.78
NMD4YLR363C CSC1Q06538 782 aa10.15□□□□□ -0.78
NMD4YLR363C GAP1P19145 602 aaPredicted RBP10.13□□□□□ -0.79
NMD4YLR363C PEX21P50091 288 aa10.12□□□□□ -0.79
NMD4YLR363C DIT2P21595 489 aa10.11□□□□□ -0.79
NMD4YLR363C PSE1P32337 1089 aaKnown RBP10.11□□□□□ -0.79
NMD4YLR363C TFB4Q12004 338 aa10.11□□□□□ -0.79
NMD4YLR363C SPT23P35210 1082 aa10.09□□□□□ -0.79
NMD4YLR363C BNI4P53858 892 aa10.08□□□□□ -0.8
NMD4YLR363C RGR1P19263 1082 aa10.07□□□□□ -0.8
NMD4YLR363C MVP1P40959 511 aaKnown RBP10.07□□□□□ -0.8
NMD4YLR363C YNR021WP53723 404 aaKnown RBP10.07□□□□□ -0.8
NMD4YLR363C TUM1Q08686 304 aaKnown RBP10.02□□□□□ -0.81
NMD4YLR363C PTC2P39966 464 aaKnown RBP10.01□□□□□ -0.81
NMD4YLR363C YPR109WQ06104 294 aa10.01□□□□□ -0.81
NMD4YLR363C YRR1Q12172 810 aa10.01□□□□□ -0.81
NMD4YLR363C CLB5P30283 435 aa9.98□□□□□ -0.81
NMD4YLR363C RPN1P38764 993 aaKnown RBP9.98□□□□□ -0.81
NMD4YLR363C YML082WQ04533 649 aaKnown RBP9.98□□□□□ -0.81
NMD4YLR363C GLC3P32775 704 aa9.97□□□□□ -0.81
NMD4YLR363C ATF2P53296 535 aa9.97□□□□□ -0.81
NMD4YLR363C PDR1P12383 1068 aa9.95□□□□□ -0.82
NMD4YLR363C TEA1P47988 759 aa9.94□□□□□ -0.82
NMD4YLR363C AIM7Q12156 149 aa9.93□□□□□ -0.82
NMD4YLR363C RAM1P22007 431 aa9.92□□□□□ -0.82
NMD4YLR363C BCK2P33306 851 aa9.91□□□□□ -0.82
NMD4YLR363C NUD1P32336 851 aa9.89□□□□□ -0.83
NMD4YLR363C VRP1P37370 817 aa9.89□□□□□ -0.83
NMD4YLR363C NPL4P33755 580 aa9.87□□□□□ -0.83
NMD4YLR363C YPR015CQ12531 247 aa9.87□□□□□ -0.83
NMD4YLR363C LEO1P38439 464 aa9.85□□□□□ -0.83
NMD4YLR363C STR2P47164 639 aa9.83□□□□□ -0.84
NMD4YLR363C KIN1P13185 1064 aa9.82□□□□□ -0.84
NMD4YLR363C ISM1P48526 1002 aa9.82□□□□□ -0.84
NMD4YLR363C NIS1P53939 407 aa9.81□□□□□ -0.84
NMD4YLR363C BUD20Q08004 166 aaPredicted RBP9.8□□□□□ -0.84
NMD4YLR363C SIT4P20604 311 aa9.78□□□□□ -0.84
NMD4YLR363C GCD11P32481 527 aaKnown RBP9.77□□□□□ -0.85
NMD4YLR363C XDJ1P39102 459 aa9.77□□□□□ -0.85
NMD4YLR363C YMR196WQ04336 1088 aa9.77□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 343.4 ms