RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W RTG3P38165 486 aa4.39□□□□□ -1.71
PHD1YKL043W YJL171CP46992 396 aa4.39□□□□□ -1.71
PHD1YKL043W VMA1P17255 1071 aaKnown RBP4.38□□□□□ -1.71
PHD1YKL043W TRP5P00931 707 aaKnown RBP4.37□□□□□ -1.71
PHD1YKL043W MSB4Q12317 492 aa4.37□□□□□ -1.71
PHD1YKL043W ATG2P53855 1592 aa4.36□□□□□ -1.71
PHD1YKL043W RTG1P32607 177 aa4.35□□□□□ -1.71
PHD1YKL043W CHD1P32657 1468 aa4.35□□□□□ -1.71
PHD1YKL043W PEP1P32319 1579 aa4.35□□□□□ -1.71
PHD1YKL043W BMT6Q12291 365 aa4.34□□□□□ -1.71
PHD1YKL043W SIN3P22579 1536 aa4.34□□□□□ -1.71
PHD1YKL043W EAP1P36041 632 aaKnown RBP4.33□□□□□ -1.72
PHD1YKL043W SSK2P53599 1579 aa4.32□□□□□ -1.72
PHD1YKL043W SAM3Q08986 587 aa4.32□□□□□ -1.72
PHD1YKL043W YNL035CP53962 389 aaKnown RBP4.29□□□□□ -1.72
PHD1YKL043W NCR1Q12200 1170 aa4.29□□□□□ -1.72
PHD1YKL043W RQC2Q12532 1038 aaKnown RBP4.29□□□□□ -1.72
PHD1YKL043W ESP1Q03018 1630 aa4.28□□□□□ -1.72
PHD1YKL043W DCW1P36091 449 aa4.27□□□□□ -1.73
PHD1YKL043W GYP5Q12344 894 aa4.27□□□□□ -1.73
PHD1YKL043W BPT1P14772 1559 aa4.27□□□□□ -1.73
PHD1YKL043W MYO2P19524 1574 aaKnown RBP4.25□□□□□ -1.73
PHD1YKL043W SEC61P32915 480 aa4.25□□□□□ -1.73
PHD1YKL043W DAN4P47179 1161 aa4.25□□□□□ -1.73
PHD1YKL043W UFD4P33202 1483 aa4.24□□□□□ -1.73
PHD1YKL043W YPK9Q12697 1472 aa4.24□□□□□ -1.73
PHD1YKL043W HTA1P04911 132 aaKnown RBP4.23□□□□□ -1.73
PHD1YKL043W HTA2P04912 132 aa4.23□□□□□ -1.73
PHD1YKL043W RAM2P29703 316 aa4.23□□□□□ -1.73
PHD1YKL043W CAB3P36076 571 aa4.23□□□□□ -1.73
PHD1YKL043W SAP30P38429 201 aa4.23□□□□□ -1.73
PHD1YKL043W YDR344CQ05510 147 aa4.23□□□□□ -1.73
PHD1YKL043W SCC2Q04002 1493 aa4.23□□□□□ -1.73
PHD1YKL043W EDS1P38073 919 aa4.22□□□□□ -1.73
PHD1YKL043W YEL023CP39992 682 aa4.22□□□□□ -1.73
PHD1YKL043W MMS22Q06164 1454 aa4.22□□□□□ -1.73
PHD1YKL043W MIF2P35201 549 aa4.2□□□□□ -1.74
PHD1YKL043W EBP2P36049 427 aaKnown RBP4.2□□□□□ -1.74
PHD1YKL043W RPO31P04051 1460 aa4.19□□□□□ -1.74
PHD1YKL043W TFG1P41895 735 aaPredicted RBP4.19□□□□□ -1.74
PHD1YKL043W JIP4Q03361 876 aa4.19□□□□□ -1.74
PHD1YKL043W YDL129WQ07555 291 aa4.19□□□□□ -1.74
PHD1YKL043W YCF1P39109 1515 aaKnown RBP4.19□□□□□ -1.74
PHD1YKL043W ABP1P15891 592 aaKnown RBP4.18□□□□□ -1.74
PHD1YKL043W MAK11P20484 414 aaKnown RBP4.18□□□□□ -1.74
PHD1YKL043W GRE2Q12068 342 aaKnown RBP4.18□□□□□ -1.74
PHD1YKL043W PTC3P34221 468 aaKnown RBP4.17□□□□□ -1.74
PHD1YKL043W SPP41P38904 1435 aa4.16□□□□□ -1.74
PHD1YKL043W PTC4P38089 393 aa4.16□□□□□ -1.74
PHD1YKL043W ENP1P38333 483 aaKnown RBP4.16□□□□□ -1.74
PHD1YKL043W POL1P13382 1468 aa4.16□□□□□ -1.74
PHD1YKL043W RKR1Q04781 1562 aa4.15□□□□□ -1.74
PHD1YKL043W TOP2P06786 1428 aaKnown RBP4.15□□□□□ -1.74
PHD1YKL043W COQ8P27697 501 aa4.15□□□□□ -1.75
PHD1YKL043W PML39Q03760 334 aa4.15□□□□□ -1.75
PHD1YKL043W STU1P38198 1513 aa4.15□□□□□ -1.75
PHD1YKL043W TY2B-LR1P0C2J3 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-FP0CX63 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-GR2P0CX64 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-CP25384 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-DR2Q03494 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY1B-DR1Q03855 1755 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-DR3Q07791 1770 aaKnown RBP4.14□□□□□ -1.75
PHD1YKL043W TY2B-OR1Q12113 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-DR1Q12472 1770 aa4.14□□□□□ -1.75
PHD1YKL043W TY2B-OR2Q12501 1770 aa4.14□□□□□ -1.75
PHD1YKL043W SOL3P38858 249 aa4.14□□□□□ -1.75
PHD1YKL043W ATH1P48016 1211 aa4.14□□□□□ -1.75
PHD1YKL043W NST1P53935 1240 aa4.14□□□□□ -1.75
PHD1YKL043W CDC25P04821 1589 aa4.14□□□□□ -1.75
PHD1YKL043W PRE3P38624 215 aa4.13□□□□□ -1.75
PHD1YKL043W ILV3P39522 585 aaKnown RBP4.13□□□□□ -1.75
PHD1YKL043W MID1P41821 548 aa4.13□□□□□ -1.75
PHD1YKL043W YOR1P53049 1477 aa4.12□□□□□ -1.75
PHD1YKL043W CHL1P22516 861 aaPredicted RBP4.12□□□□□ -1.75
PHD1YKL043W BCK2P33306 851 aa4.12□□□□□ -1.75
PHD1YKL043W GUT1P32190 709 aa4.11□□□□□ -1.75
PHD1YKL043W STH1P32597 1359 aa4.11□□□□□ -1.75
PHD1YKL043W PAN1P32521 1480 aa4.11□□□□□ -1.75
PHD1YKL043W DNF1P32660 1571 aa4.1□□□□□ -1.75
PHD1YKL043W SEC3P33332 1336 aaKnown RBP4.1□□□□□ -1.75
PHD1YKL043W SMC4Q12267 1418 aa4.1□□□□□ -1.75
PHD1YKL043W ESC1Q03661 1658 aaKnown RBP4.1□□□□□ -1.75
PHD1YKL043W TY1B-BRQ12193 1756 aa4.09□□□□□ -1.75
PHD1YKL043W TY1B-GR3Q12316 1755 aa4.09□□□□□ -1.75
PHD1YKL043W TY2B-BQ12491 1770 aa4.09□□□□□ -1.75
PHD1YKL043W TY1B-ORQ92393 1755 aa4.09□□□□□ -1.75
PHD1YKL043W TY1B-DR3Q99231 1755 aa4.09□□□□□ -1.75
PHD1YKL043W NUP170P38181 1502 aa4.09□□□□□ -1.75
PHD1YKL043W ELP4Q02884 456 aaKnown RBP4.08□□□□□ -1.76
PHD1YKL043W TY1B-HO13535 1793 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-DR5P0C2I2 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-DR6P0C2I3 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-LR2P0C2I5 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-LR3P0C2I6 1755 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W TY1B-PR1P0C2I9 1755 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W TY1B-PR2P0C2J0 1756 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-PR3P0C2J1 1755 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W TY1B-JR1P47098 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-ML2Q03434 1755 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms