RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W MTC1P47018 478 aaKnown RBP7.26□□□□□ -1.25
PHD1YKL043W FAP1P53971 965 aa6.74□□□□□ -1.33
PHD1YKL043W DRS1P32892 752 aaKnown RBP6.64□□□□□ -1.35
PHD1YKL043W PRY3P47033 881 aa6.36□□□□□ -1.39
PHD1YKL043W PRI1P10363 409 aa6.2□□□□□ -1.42
PHD1YKL043W AAD16Q02895 342 aa6.15□□□□□ -1.42
PHD1YKL043W YCK3P39962 524 aa6.06□□□□□ -1.44
PHD1YKL043W RPG1P38249 964 aaKnown RBP6.01□□□□□ -1.45
PHD1YKL043W ISW2Q08773 1120 aa6□□□□□ -1.45
PHD1YKL043W TSR3Q12094 313 aaKnown RBP5.9□□□□□ -1.46
PHD1YKL043W DIP2Q12220 943 aaPredicted RBP5.85□□□□□ -1.47
PHD1YKL043W HAA1Q12753 694 aaKnown RBP5.85□□□□□ -1.47
PHD1YKL043W RSE1Q04693 1361 aaKnown RBP5.68□□□□□ -1.5
PHD1YKL043W AVT3P36062 692 aa5.61□□□□□ -1.51
PHD1YKL043W MRPL32P25348 183 aa5.59□□□□□ -1.51
PHD1YKL043W RPL17AP05740 184 aaKnown RBP5.57□□□□□ -1.52
PHD1YKL043W RPL17BP46990 184 aaKnown RBP5.57□□□□□ -1.52
PHD1YKL043W REB1P21538 810 aa5.52□□□□□ -1.53
PHD1YKL043W BFR2Q06631 534 aaKnown RBP5.44□□□□□ -1.54
PHD1YKL043W CDC27P38042 758 aa5.37□□□□□ -1.55
PHD1YKL043W YGL015CP33199 130 aa5.36□□□□□ -1.55
PHD1YKL043W SPT21P35209 758 aa5.31□□□□□ -1.56
PHD1YKL043W YKR023WP36119 530 aaKnown RBP5.29□□□□□ -1.56
PHD1YKL043W DCD1P06773 312 aa5.24□□□□□ -1.57
PHD1YKL043W HOP09932 586 aa5.22□□□□□ -1.57
PHD1YKL043W MAP2P38174 421 aaKnown RBP5.21□□□□□ -1.58
PHD1YKL043W TFC8Q12308 588 aa5.17□□□□□ -1.58
PHD1YKL043W UBP10P53874 792 aaPredicted RBP5.14□□□□□ -1.59
PHD1YKL043W SCY1P53009 804 aa5.07□□□□□ -1.6
PHD1YKL043W RIM101P33400 625 aa5.05□□□□□ -1.6
PHD1YKL043W BUD31P25337 157 aaPredicted RBP5.03□□□□□ -1.6
PHD1YKL043W BCH2P36122 765 aa5□□□□□ -1.61
PHD1YKL043W SLX5P32828 619 aaKnown RBP4.97□□□□□ -1.61
PHD1YKL043W OXP1P28273 1286 aa4.93□□□□□ -1.62
PHD1YKL043W INO80P53115 1489 aa4.92□□□□□ -1.62
PHD1YKL043W TIF4632P39936 914 aaKnown RBP4.91□□□□□ -1.62
PHD1YKL043W MON2P48563 1636 aaPredicted RBP4.89□□□□□ -1.63
PHD1YKL043W TGL3P40308 642 aa4.88□□□□□ -1.63
PHD1YKL043W EPS1P40557 701 aa4.87□□□□□ -1.63
PHD1YKL043W BDF1P35817 686 aa4.84□□□□□ -1.63
PHD1YKL043W SGS1P35187 1447 aa4.83□□□□□ -1.64
PHD1YKL043W PTP3P40048 928 aa4.83□□□□□ -1.64
PHD1YKL043W TCB3Q03640 1545 aaKnown RBP4.78□□□□□ -1.64
PHD1YKL043W YIL055CP40523 627 aaKnown RBP4.78□□□□□ -1.64
PHD1YKL043W YAH1Q12184 172 aaKnown RBP4.78□□□□□ -1.64
PHD1YKL043W SIS1P25294 352 aaKnown RBP4.77□□□□□ -1.65
PHD1YKL043W UBP9P39967 754 aa4.76□□□□□ -1.65
PHD1YKL043W SWR1Q05471 1514 aa4.74□□□□□ -1.65
PHD1YKL043W TY1B-DR4Q07793 1604 aa4.73□□□□□ -1.65
PHD1YKL043W RSM7P47150 247 aa4.73□□□□□ -1.65
PHD1YKL043W AI2P03876 854 aa4.72□□□□□ -1.65
PHD1YKL043W YBL029C-AQ3E756 94 aa4.71□□□□□ -1.66
PHD1YKL043W SPA2P23201 1466 aaKnown RBP4.69□□□□□ -1.66
PHD1YKL043W DNA2P38859 1522 aa4.68□□□□□ -1.66
PHD1YKL043W BBC1P47068 1157 aa4.68□□□□□ -1.66
PHD1YKL043W MST1P07236 462 aa4.67□□□□□ -1.66
PHD1YKL043W YLR271WQ06152 274 aa4.66□□□□□ -1.66
PHD1YKL043W YOR238WQ08634 303 aa4.65□□□□□ -1.67
PHD1YKL043W SPT6P23615 1451 aaKnown RBP4.63□□□□□ -1.67
PHD1YKL043W HSL1P34244 1518 aa4.63□□□□□ -1.67
PHD1YKL043W KOG1P38873 1557 aa4.62□□□□□ -1.67
PHD1YKL043W WSC3Q12215 556 aa4.62□□□□□ -1.67
PHD1YKL043W NSR1P27476 414 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
PHD1YKL043W TFA1P36100 482 aa4.61□□□□□ -1.67
PHD1YKL043W YAP5P40574 245 aa4.6□□□□□ -1.67
PHD1YKL043W VNX1P42839 908 aa4.6□□□□□ -1.67
PHD1YKL043W PIB1Q06651 286 aa4.6□□□□□ -1.67
PHD1YKL043W PSD2P53037 1138 aaKnown RBP4.59□□□□□ -1.67
PHD1YKL043W SKI3P17883 1432 aaKnown RBP4.58□□□□□ -1.68
PHD1YKL043W MRM1P25270 412 aa4.56□□□□□ -1.68
PHD1YKL043W SPP1Q03012 353 aa4.55□□□□□ -1.68
PHD1YKL043W HIR3P47171 1648 aa4.54□□□□□ -1.68
PHD1YKL043W GTT3P39996 337 aa4.53□□□□□ -1.68
PHD1YKL043W SSN2P38931 1420 aa4.53□□□□□ -1.68
PHD1YKL043W SSP1P38871 571 aa4.52□□□□□ -1.69
PHD1YKL043W CST9Q06032 482 aa4.52□□□□□ -1.69
PHD1YKL043W XRN1P22147 1528 aaKnown RBP4.5□□□□□ -1.69
PHD1YKL043W TIF11P38912 153 aaKnown RBP4.49□□□□□ -1.69
PHD1YKL043W ECM5Q03214 1411 aa4.47□□□□□ -1.69
PHD1YKL043W FKH1P40466 484 aa4.47□□□□□ -1.69
PHD1YKL043W YFR006WP43590 535 aa4.47□□□□□ -1.69
PHD1YKL043W AIR2Q12476 344 aaKnown RBP4.47□□□□□ -1.69
PHD1YKL043W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
PHD1YKL043W LDB19Q12502 818 aa4.46□□□□□ -1.7
PHD1YKL043W BUD4P47136 1447 aa4.46□□□□□ -1.7
PHD1YKL043W RCR1P38212 213 aa4.45□□□□□ -1.7
PHD1YKL043W VPS29P38759 282 aa4.44□□□□□ -1.7
PHD1YKL043W ULI1P43604 169 aa4.44□□□□□ -1.7
PHD1YKL043W STS1P38637 319 aa4.43□□□□□ -1.7
PHD1YKL043W NOP2P40991 618 aaKnown RBP4.43□□□□□ -1.7
PHD1YKL043W IOC2Q12072 812 aa4.43□□□□□ -1.7
PHD1YKL043W THO2P53552 1597 aaKnown RBP4.43□□□□□ -1.7
PHD1YKL043W DBP1P24784 617 aaKnown RBP4.42□□□□□ -1.7
PHD1YKL043W SET4P42948 560 aa4.42□□□□□ -1.7
PHD1YKL043W YOL036WQ08206 761 aa4.42□□□□□ -1.7
PHD1YKL043W MGA2P40578 1113 aa4.41□□□□□ -1.7
PHD1YKL043W YMR1P47147 688 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PHD1YKL043W REV3P14284 1504 aa4.41□□□□□ -1.7
PHD1YKL043W TAF2P23255 1407 aa4.4□□□□□ -1.7
PHD1YKL043W MDS3P53094 1487 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms