RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C TRP5P00931 707 aaKnown RBP8.83□□□□□ -1
CUP1-1YHR053C SIS1P25294 352 aaKnown RBP8.79□□□□□ -1
CUP1-1YHR053C IOC2Q12072 812 aa8.79□□□□□ -1
CUP1-1YHR053C LDB19Q12502 818 aa8.78□□□□□ -1
CUP1-1YHR053C CKB1P43639 278 aa8.77□□□□□ -1.01
CUP1-1YHR053C YEL023CP39992 682 aa8.76□□□□□ -1.01
CUP1-1YHR053C JIP4Q03361 876 aa8.75□□□□□ -1.01
CUP1-1YHR053C YNL035CP53962 389 aaKnown RBP8.74□□□□□ -1.01
CUP1-1YHR053C PTC4P38089 393 aa8.73□□□□□ -1.01
CUP1-1YHR053C YGR273CP53329 174 aa8.73□□□□□ -1.01
CUP1-1YHR053C RTG1P32607 177 aa8.72□□□□□ -1.01
CUP1-1YHR053C REF2P42073 533 aaPredicted RBP8.71□□□□□ -1.02
CUP1-1YHR053C SOL3P38858 249 aa8.7□□□□□ -1.02
CUP1-1YHR053C SEC61P32915 480 aa8.67□□□□□ -1.02
CUP1-1YHR053C VHR2P40041 505 aa8.67□□□□□ -1.02
CUP1-1YHR053C TFG1P41895 735 aaPredicted RBP8.67□□□□□ -1.02
CUP1-1YHR053C AI4P03878 556 aa8.66□□□□□ -1.02
CUP1-1YHR053C MPH3P0CE00 602 aa8.66□□□□□ -1.02
CUP1-1YHR053C FKH1P40466 484 aa8.66□□□□□ -1.02
CUP1-1YHR053C DAN4P47179 1161 aa8.65□□□□□ -1.02
CUP1-1YHR053C NST1P53935 1240 aa8.65□□□□□ -1.02
CUP1-1YHR053C NCR1Q12200 1170 aa8.65□□□□□ -1.02
CUP1-1YHR053C SPB4P25808 606 aaPredicted RBP8.64□□□□□ -1.03
CUP1-1YHR053C PBS2P08018 668 aa8.62□□□□□ -1.03
CUP1-1YHR053C KEX1P09620 729 aa8.62□□□□□ -1.03
CUP1-1YHR053C UBP14P38237 781 aaKnown RBP8.62□□□□□ -1.03
CUP1-1YHR053C YLR326WQ06170 240 aaKnown RBP8.62□□□□□ -1.03
CUP1-1YHR053C KIC1P38692 1080 aa8.61□□□□□ -1.03
CUP1-1YHR053C MAK21Q12176 1025 aaKnown RBP8.61□□□□□ -1.03
CUP1-1YHR053C AIR2Q12476 344 aaKnown RBP8.6□□□□□ -1.03
CUP1-1YHR053C RAD54P32863 898 aa8.59□□□□□ -1.03
CUP1-1YHR053C YJL171CP46992 396 aa8.58□□□□□ -1.04
CUP1-1YHR053C ILV3P39522 585 aaKnown RBP8.57□□□□□ -1.04
CUP1-1YHR053C PML39Q03760 334 aa8.57□□□□□ -1.04
CUP1-1YHR053C COX6P00427 148 aa8.56□□□□□ -1.04
CUP1-1YHR053C YDL129WQ07555 291 aa8.55□□□□□ -1.04
CUP1-1YHR053C DSF2P38213 736 aa8.54□□□□□ -1.04
CUP1-1YHR053C YDR090CQ03193 310 aa8.54□□□□□ -1.04
CUP1-1YHR053C PCS60P38137 543 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
CUP1-1YHR053C MAM3Q12296 706 aa8.53□□□□□ -1.04
CUP1-1YHR053C SLI15P38283 698 aa8.52□□□□□ -1.05
CUP1-1YHR053C BMT6Q12291 365 aa8.52□□□□□ -1.05
CUP1-1YHR053C PEX29Q03370 554 aa8.51□□□□□ -1.05
CUP1-1YHR053C RPP1BP10622 106 aaKnown RBP8.5□□□□□ -1.05
CUP1-1YHR053C SAP30P38429 201 aa8.5□□□□□ -1.05
CUP1-1YHR053C MID1P41821 548 aa8.49□□□□□ -1.05
CUP1-1YHR053C LEU3P08638 886 aa8.46□□□□□ -1.06
CUP1-1YHR053C IES2P40154 320 aa8.45□□□□□ -1.06
CUP1-1YHR053C DPL1Q05567 589 aa8.42□□□□□ -1.06
CUP1-1YHR053C MPC54Q08550 464 aa8.41□□□□□ -1.06
CUP1-1YHR053C CDC73Q06697 393 aa8.4□□□□□ -1.06
CUP1-1YHR053C ORC6P38826 435 aa8.37□□□□□ -1.07
CUP1-1YHR053C NUP42P49686 430 aaKnown RBP8.37□□□□□ -1.07
CUP1-1YHR053C PEX21P50091 288 aa8.37□□□□□ -1.07
CUP1-1YHR053C ELP4Q02884 456 aaKnown RBP8.37□□□□□ -1.07
CUP1-1YHR053C ARH1P48360 493 aa8.36□□□□□ -1.07
CUP1-1YHR053C CSC1Q06538 782 aa8.36□□□□□ -1.07
CUP1-1YHR053C NMA111P53920 997 aa8.35□□□□□ -1.07
CUP1-1YHR053C ISU2Q12056 156 aa8.35□□□□□ -1.07
CUP1-1YHR053C DIT2P21595 489 aa8.34□□□□□ -1.07
CUP1-1YHR053C PSE1P32337 1089 aaKnown RBP8.34□□□□□ -1.07
CUP1-1YHR053C HAP5Q02516 242 aa8.34□□□□□ -1.07
CUP1-1YHR053C PRE3P38624 215 aa8.33□□□□□ -1.08
CUP1-1YHR053C YNR021WP53723 404 aaKnown RBP8.33□□□□□ -1.08
CUP1-1YHR053C TFB4Q12004 338 aa8.32□□□□□ -1.08
CUP1-1YHR053C CHL1P22516 861 aaPredicted RBP8.31□□□□□ -1.08
CUP1-1YHR053C GAP1P19145 602 aaPredicted RBP8.3□□□□□ -1.08
CUP1-1YHR053C RPN1P38764 993 aaKnown RBP8.3□□□□□ -1.08
CUP1-1YHR053C SPT23P35210 1082 aa8.29□□□□□ -1.08
CUP1-1YHR053C YDR344CQ05510 147 aa8.29□□□□□ -1.08
CUP1-1YHR053C RGR1P19263 1082 aa8.28□□□□□ -1.08
CUP1-1YHR053C MVP1P40959 511 aaKnown RBP8.28□□□□□ -1.08
CUP1-1YHR053C ATF2P53296 535 aa8.28□□□□□ -1.08
CUP1-1YHR053C GLC3P32775 704 aa8.26□□□□□ -1.09
CUP1-1YHR053C BNI4P53858 892 aa8.26□□□□□ -1.09
CUP1-1YHR053C TUM1Q08686 304 aaKnown RBP8.26□□□□□ -1.09
CUP1-1YHR053C YRR1Q12172 810 aa8.25□□□□□ -1.09
CUP1-1YHR053C CLB5P30283 435 aa8.24□□□□□ -1.09
CUP1-1YHR053C PTC2P39966 464 aaKnown RBP8.24□□□□□ -1.09
CUP1-1YHR053C YPR109WQ06104 294 aa8.24□□□□□ -1.09
CUP1-1YHR053C TEA1P47988 759 aa8.22□□□□□ -1.09
CUP1-1YHR053C AIM7Q12156 149 aa8.22□□□□□ -1.09
CUP1-1YHR053C LEO1P38439 464 aa8.21□□□□□ -1.1
CUP1-1YHR053C PDR1P12383 1068 aa8.17□□□□□ -1.1
CUP1-1YHR053C NPL4P33755 580 aa8.16□□□□□ -1.1
CUP1-1YHR053C YML082WQ04533 649 aaKnown RBP8.16□□□□□ -1.1
CUP1-1YHR053C NUD1P32336 851 aa8.15□□□□□ -1.1
CUP1-1YHR053C KIN1P13185 1064 aa8.14□□□□□ -1.11
CUP1-1YHR053C RAM1P22007 431 aa8.11□□□□□ -1.11
CUP1-1YHR053C BCK2P33306 851 aa8.11□□□□□ -1.11
CUP1-1YHR053C VRP1P37370 817 aa8.11□□□□□ -1.11
CUP1-1YHR053C YMR196WQ04336 1088 aa8.1□□□□□ -1.11
CUP1-1YHR053C NIS1P53939 407 aa8.08□□□□□ -1.12
CUP1-1YHR053C STR2P47164 639 aa8.07□□□□□ -1.12
CUP1-1YHR053C ISM1P48526 1002 aa8.07□□□□□ -1.12
CUP1-1YHR053C YPR015CQ12531 247 aa8.07□□□□□ -1.12
CUP1-1YHR053C GCD11P32481 527 aaKnown RBP8.05□□□□□ -1.12
CUP1-1YHR053C FPK1P53739 893 aa8.05□□□□□ -1.12
CUP1-1YHR053C GYP1Q08484 637 aa8.05□□□□□ -1.12
CUP1-1YHR053C BUD20Q08004 166 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms