RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C VPS4P52917 437 aa5.86□□□□□ -1.47
PRP43YGL120C DOS2P54858 310 aa5.86□□□□□ -1.47
PRP43YGL120C ETT1Q08421 412 aaKnown RBP5.86□□□□□ -1.47
PRP43YGL120C SPT16P32558 1035 aaKnown RBP5.85□□□□□ -1.47
PRP43YGL120C RIM101P33400 625 aa5.83□□□□□ -1.48
PRP43YGL120C MSH4P40965 878 aaPredicted RBP5.83□□□□□ -1.48
PRP43YGL120C IME2P32581 645 aa5.83□□□□□ -1.48
PRP43YGL120C BRL1P38770 471 aa5.82□□□□□ -1.48
PRP43YGL120C MPP10P47083 593 aaKnown RBP5.82□□□□□ -1.48
PRP43YGL120C VPS72Q03388 795 aa5.82□□□□□ -1.48
PRP43YGL120C SCY1P53009 804 aa5.82□□□□□ -1.48
PRP43YGL120C NST1P53935 1240 aa5.82□□□□□ -1.48
PRP43YGL120C CBF5P33322 483 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PRP43YGL120C ASF1P32447 279 aa5.79□□□□□ -1.48
PRP43YGL120C LTV1P34078 463 aa5.79□□□□□ -1.48
PRP43YGL120C BRN1P38170 754 aa5.79□□□□□ -1.48
PRP43YGL120C TCB3Q03640 1545 aaKnown RBP5.79□□□□□ -1.48
PRP43YGL120C EAF7P53911 425 aaKnown RBP5.79□□□□□ -1.48
PRP43YGL120C SGS1P35187 1447 aa5.78□□□□□ -1.48
PRP43YGL120C MSH3P25336 1018 aa5.78□□□□□ -1.48
PRP43YGL120C TPO2P53283 614 aa5.78□□□□□ -1.48
PRP43YGL120C ECM16Q04217 1267 aaKnown RBP5.77□□□□□ -1.49
PRP43YGL120C TAN1P53072 289 aaPredicted RBP5.77□□□□□ -1.49
PRP43YGL120C HSC82P15108 705 aaKnown RBP5.76□□□□□ -1.49
PRP43YGL120C RRP14P36080 434 aaKnown RBP5.76□□□□□ -1.49
PRP43YGL120C ATG36P46983 293 aa5.76□□□□□ -1.49
PRP43YGL120C RPN7Q06103 429 aaKnown RBP5.76□□□□□ -1.49
PRP43YGL120C PET111P08468 800 aa5.76□□□□□ -1.49
PRP43YGL120C CDC11P32458 415 aa5.76□□□□□ -1.49
PRP43YGL120C ISW1P38144 1129 aa5.76□□□□□ -1.49
PRP43YGL120C PRP3Q03338 469 aaPredicted RBP5.75□□□□□ -1.49
PRP43YGL120C PAF1P38351 445 aa5.75□□□□□ -1.49
PRP43YGL120C PEA2P40091 420 aa5.75□□□□□ -1.49
PRP43YGL120C SEC9P40357 651 aa5.75□□□□□ -1.49
PRP43YGL120C MCM1P11746 286 aa5.74□□□□□ -1.49
PRP43YGL120C RAD26P40352 1085 aa5.74□□□□□ -1.49
PRP43YGL120C NAB3P38996 802 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
PRP43YGL120C SMC3P47037 1230 aa5.74□□□□□ -1.49
PRP43YGL120C APL5Q08951 932 aaKnown RBP5.74□□□□□ -1.49
PRP43YGL120C TAF13P11747 167 aa5.73□□□□□ -1.49
PRP43YGL120C SIC1P38634 284 aa5.73□□□□□ -1.49
PRP43YGL120C HOS4P40480 1083 aa5.73□□□□□ -1.49
PRP43YGL120C NOP8Q08287 484 aaPredicted RBP5.73□□□□□ -1.49
PRP43YGL120C OSW7P43611 510 aa5.73□□□□□ -1.49
PRP43YGL120C YMR196WQ04336 1088 aa5.73□□□□□ -1.49
PRP43YGL120C TY1B-AO13527 1196 aaKnown RBP5.72□□□□□ -1.49
PRP43YGL120C DAL5P15365 543 aa5.72□□□□□ -1.49
PRP43YGL120C SLX5P32828 619 aaKnown RBP5.72□□□□□ -1.49
PRP43YGL120C SAP190P36123 1033 aa5.72□□□□□ -1.49
PRP43YGL120C YLL054CQ12244 843 aa5.72□□□□□ -1.49
PRP43YGL120C LEM3P42838 414 aa5.71□□□□□ -1.49
PRP43YGL120C LEU3P08638 886 aa5.71□□□□□ -1.5
PRP43YGL120C NOP58Q12499 511 aaKnown RBP5.71□□□□□ -1.5
PRP43YGL120C DEP1P31385 405 aa5.7□□□□□ -1.5
PRP43YGL120C BYE1P36106 594 aa5.7□□□□□ -1.5
PRP43YGL120C CTR9P89105 1077 aa5.7□□□□□ -1.5
PRP43YGL120C SPA2P23201 1466 aaKnown RBP5.7□□□□□ -1.5
PRP43YGL120C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
PRP43YGL120C ABP1P15891 592 aaKnown RBP5.69□□□□□ -1.5
PRP43YGL120C BCH2P36122 765 aa5.69□□□□□ -1.5
PRP43YGL120C DSN1P40568 576 aa5.69□□□□□ -1.5
PRP43YGL120C RCF1Q03713 159 aa5.69□□□□□ -1.5
PRP43YGL120C SUP35P05453 685 aaKnown RBP5.69□□□□□ -1.5
PRP43YGL120C RSC8P43609 557 aaKnown RBP5.69□□□□□ -1.5
PRP43YGL120C STH1P32597 1359 aa5.69□□□□□ -1.5
PRP43YGL120C SEC20P28791 383 aa5.68□□□□□ -1.5
PRP43YGL120C YMR124WP39523 943 aaKnown RBP5.68□□□□□ -1.5
PRP43YGL120C OPY1P38271 328 aa5.68□□□□□ -1.5
PRP43YGL120C KIP3P53086 805 aaKnown RBP5.68□□□□□ -1.5
PRP43YGL120C CFT2Q12102 859 aaPredicted RBP5.68□□□□□ -1.5
PRP43YGL120C SNF7P39929 240 aaKnown RBP5.67□□□□□ -1.5
PRP43YGL120C AIM20P40451 204 aa5.67□□□□□ -1.5
PRP43YGL120C DJP1P40564 432 aa5.66□□□□□ -1.5
PRP43YGL120C SIS1P25294 352 aaKnown RBP5.66□□□□□ -1.5
PRP43YGL120C VID30P53076 958 aa5.66□□□□□ -1.5
PRP43YGL120C IMH1Q06704 911 aaKnown RBP5.66□□□□□ -1.5
PRP43YGL120C PRS1P32895 427 aaKnown RBP5.65□□□□□ -1.5
PRP43YGL120C TGL3P40308 642 aa5.65□□□□□ -1.5
PRP43YGL120C RPT2P40327 437 aaKnown RBP5.65□□□□□ -1.5
PRP43YGL120C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PRP43YGL120C DMA2P53924 522 aa5.65□□□□□ -1.5
PRP43YGL120C RTS3P53289 263 aa5.65□□□□□ -1.51
PRP43YGL120C RRP15Q06511 250 aaPredicted RBP5.65□□□□□ -1.51
PRP43YGL120C LAM6Q08001 693 aa5.65□□□□□ -1.51
PRP43YGL120C YVC1Q12324 675 aa5.65□□□□□ -1.51
PRP43YGL120C RAD51P25454 400 aa5.64□□□□□ -1.51
PRP43YGL120C PAP2P53632 584 aaKnown RBP5.64□□□□□ -1.51
PRP43YGL120C ALD3P54114 506 aa5.64□□□□□ -1.51
PRP43YGL120C OXP1P28273 1286 aa5.64□□□□□ -1.51
PRP43YGL120C RPC82P32349 654 aa5.64□□□□□ -1.51
PRP43YGL120C PIM1P36775 1133 aa5.64□□□□□ -1.51
PRP43YGL120C SSP1P38871 571 aa5.64□□□□□ -1.51
PRP43YGL120C PKH1Q03407 766 aa5.64□□□□□ -1.51
PRP43YGL120C CEF1Q03654 590 aaPredicted RBP5.64□□□□□ -1.51
PRP43YGL120C VPS5Q92331 675 aa5.64□□□□□ -1.51
PRP43YGL120C TY4B-PA0A0B7P3V8 1104 aa5.63□□□□□ -1.51
PRP43YGL120C CLB5P30283 435 aa5.63□□□□□ -1.51
PRP43YGL120C MTR4P47047 1073 aaKnown RBP5.63□□□□□ -1.51
PRP43YGL120C YDR341CQ05506 607 aaKnown RBP5.63□□□□□ -1.51
PRP43YGL120C YLR257WQ06146 321 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms