RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C MTC1P47018 478 aaKnown RBP8.26□□□□□ -1.09
PRP43YGL120C RQC2Q12532 1038 aaKnown RBP8.08□□□□□ -1.12
PRP43YGL120C FAP1P53971 965 aa7.92□□□□□ -1.14
PRP43YGL120C BFR2Q06631 534 aaKnown RBP7.76□□□□□ -1.17
PRP43YGL120C DRS1P32892 752 aaKnown RBP7.7□□□□□ -1.18
PRP43YGL120C PRY3P47033 881 aa7.46□□□□□ -1.21
PRP43YGL120C TAF7Q05021 590 aa7.26□□□□□ -1.25
PRP43YGL120C AAD16Q02895 342 aa7.17□□□□□ -1.26
PRP43YGL120C PRI1P10363 409 aa7.16□□□□□ -1.26
PRP43YGL120C URN1Q06525 465 aaKnown RBP7.1□□□□□ -1.27
PRP43YGL120C YCK3P39962 524 aa7□□□□□ -1.29
PRP43YGL120C ISW2Q08773 1120 aa6.92□□□□□ -1.3
PRP43YGL120C CAB3P36076 571 aa6.91□□□□□ -1.3
PRP43YGL120C RPG1P38249 964 aaKnown RBP6.91□□□□□ -1.3
PRP43YGL120C EBP2P36049 427 aaKnown RBP6.89□□□□□ -1.31
PRP43YGL120C HAA1Q12753 694 aaKnown RBP6.88□□□□□ -1.31
PRP43YGL120C SIS2P36024 562 aa6.86□□□□□ -1.31
PRP43YGL120C NOP2P40991 618 aaKnown RBP6.83□□□□□ -1.32
PRP43YGL120C TFA1P36100 482 aa6.82□□□□□ -1.32
PRP43YGL120C TSR3Q12094 313 aaKnown RBP6.82□□□□□ -1.32
PRP43YGL120C DIP2Q12220 943 aaPredicted RBP6.74□□□□□ -1.33
PRP43YGL120C YFR016CP43597 1233 aaKnown RBP6.68□□□□□ -1.34
PRP43YGL120C AVT3P36062 692 aa6.61□□□□□ -1.35
PRP43YGL120C YRB30P53107 440 aaPredicted RBP6.58□□□□□ -1.36
PRP43YGL120C RPS0BP46654 252 aaKnown RBP6.57□□□□□ -1.36
PRP43YGL120C MRPL32P25348 183 aa6.5□□□□□ -1.37
PRP43YGL120C RSE1Q04693 1361 aaKnown RBP6.5□□□□□ -1.37
PRP43YGL120C KRI1P42846 591 aaKnown RBP6.49□□□□□ -1.37
PRP43YGL120C NAP1P25293 417 aaKnown RBP6.48□□□□□ -1.37
PRP43YGL120C YPR148CQ06523 435 aa6.43□□□□□ -1.38
PRP43YGL120C NSR1P27476 414 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
PRP43YGL120C CWC22P53333 577 aaKnown RBP6.38□□□□□ -1.39
PRP43YGL120C IOC4Q04213 475 aa6.38□□□□□ -1.39
PRP43YGL120C MNN4P36044 1178 aa6.36□□□□□ -1.39
PRP43YGL120C RPL17AP05740 184 aaKnown RBP6.33□□□□□ -1.4
PRP43YGL120C RPL17BP46990 184 aaKnown RBP6.33□□□□□ -1.4
PRP43YGL120C REB1P21538 810 aa6.33□□□□□ -1.4
PRP43YGL120C DEF1P35732 738 aaKnown RBP6.31□□□□□ -1.4
PRP43YGL120C YGL015CP33199 130 aa6.3□□□□□ -1.4
PRP43YGL120C LEO1P38439 464 aa6.3□□□□□ -1.4
PRP43YGL120C AIM44Q99299 758 aa6.28□□□□□ -1.4
PRP43YGL120C PSH1Q12161 406 aa6.26□□□□□ -1.41
PRP43YGL120C TCB2P48231 1178 aa6.21□□□□□ -1.42
PRP43YGL120C ENV11P53246 860 aa6.21□□□□□ -1.42
PRP43YGL120C SNU71P53207 620 aaKnown RBP6.18□□□□□ -1.42
PRP43YGL120C TOP1P04786 769 aa6.17□□□□□ -1.42
PRP43YGL120C RLP24Q07915 199 aaKnown RBP6.17□□□□□ -1.42
PRP43YGL120C NUG1P40010 520 aaKnown RBP6.16□□□□□ -1.42
PRP43YGL120C CDC27P38042 758 aa6.14□□□□□ -1.43
PRP43YGL120C SPT2P06843 333 aaPredicted RBP6.14□□□□□ -1.43
PRP43YGL120C NOP53Q12080 455 aaKnown RBP6.13□□□□□ -1.43
PRP43YGL120C QCR6P00127 147 aa6.11□□□□□ -1.43
PRP43YGL120C RLF2Q12495 606 aa6.11□□□□□ -1.43
PRP43YGL120C IFH1P39520 1085 aa6.09□□□□□ -1.43
PRP43YGL120C HSP82P02829 709 aaKnown RBP6.09□□□□□ -1.43
PRP43YGL120C RNA1P11745 407 aaKnown RBP6.09□□□□□ -1.43
PRP43YGL120C FUN12P39730 1002 aaKnown RBP6.07□□□□□ -1.44
PRP43YGL120C FPR3P38911 411 aaKnown RBP6.07□□□□□ -1.44
PRP43YGL120C MDG1P53885 366 aa6.07□□□□□ -1.44
PRP43YGL120C SPT7P35177 1332 aa6.06□□□□□ -1.44
PRP43YGL120C DMA1P38823 416 aa6.06□□□□□ -1.44
PRP43YGL120C PLP2Q12017 286 aa6.05□□□□□ -1.44
PRP43YGL120C SPT21P35209 758 aa6.05□□□□□ -1.44
PRP43YGL120C FPR4Q06205 392 aaPredicted RBP6.05□□□□□ -1.44
PRP43YGL120C ENP1P38333 483 aaKnown RBP6.04□□□□□ -1.44
PRP43YGL120C RPN1P38764 993 aaKnown RBP6.04□□□□□ -1.44
PRP43YGL120C ORC1P54784 914 aaPredicted RBP6.04□□□□□ -1.44
PRP43YGL120C RIX1P38883 763 aaPredicted RBP6.04□□□□□ -1.44
PRP43YGL120C YGR130CP53278 816 aa6.04□□□□□ -1.44
PRP43YGL120C RPS0AP32905 252 aaKnown RBP6.02□□□□□ -1.45
PRP43YGL120C YKR023WP36119 530 aaKnown RBP6.02□□□□□ -1.45
PRP43YGL120C MAP2P38174 421 aaKnown RBP5.99□□□□□ -1.45
PRP43YGL120C TOA1P32773 286 aa5.99□□□□□ -1.45
PRP43YGL120C HIF1Q12373 385 aa5.98□□□□□ -1.45
PRP43YGL120C DCD1P06773 312 aa5.97□□□□□ -1.45
PRP43YGL120C NMD2P38798 1089 aaKnown RBP5.97□□□□□ -1.45
PRP43YGL120C GIN4Q12263 1142 aa5.96□□□□□ -1.46
PRP43YGL120C SEC3P33332 1336 aaKnown RBP5.96□□□□□ -1.46
PRP43YGL120C CLC1P17891 233 aa5.96□□□□□ -1.46
PRP43YGL120C HOP09932 586 aa5.95□□□□□ -1.46
PRP43YGL120C SUB1P54000 292 aaKnown RBP5.95□□□□□ -1.46
PRP43YGL120C SPC110P32380 944 aa5.94□□□□□ -1.46
PRP43YGL120C YNL011CP53980 444 aa5.94□□□□□ -1.46
PRP43YGL120C GRX3Q03835 250 aa5.94□□□□□ -1.46
PRP43YGL120C PIL1P53252 339 aaKnown RBP5.93□□□□□ -1.46
PRP43YGL120C SKI3P17883 1432 aaKnown RBP5.93□□□□□ -1.46
PRP43YGL120C INO80P53115 1489 aa5.93□□□□□ -1.46
PRP43YGL120C YTA7P40340 1379 aa5.92□□□□□ -1.46
PRP43YGL120C BUD31P25337 157 aaPredicted RBP5.92□□□□□ -1.46
PRP43YGL120C TIF4632P39936 914 aaKnown RBP5.92□□□□□ -1.46
PRP43YGL120C UBP10P53874 792 aaPredicted RBP5.92□□□□□ -1.46
PRP43YGL120C NHA1Q99271 985 aa5.92□□□□□ -1.46
PRP43YGL120C SSA1P10591 642 aaKnown RBP5.91□□□□□ -1.46
PRP43YGL120C SSA2P10592 639 aaKnown RBP5.91□□□□□ -1.46
PRP43YGL120C TLG1Q03322 224 aa5.91□□□□□ -1.46
PRP43YGL120C SAS10Q12136 610 aaPredicted RBP5.91□□□□□ -1.46
PRP43YGL120C SWE1P32944 819 aa5.9□□□□□ -1.47
PRP43YGL120C NNF2P53253 936 aa5.88□□□□□ -1.47
PRP43YGL120C YSH1Q06224 779 aaPredicted RBP5.88□□□□□ -1.47
PRP43YGL120C TFC8Q12308 588 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms