RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	MIF2	P35201	549 aa		4.83	□□□□□ -1.64
GCD6	YDR211W	EDS1	P38073	919 aa		4.82	□□□□□ -1.64
GCD6	YDR211W	SET1	P38827	1080 aa	Known RBP	4.82	□□□□□ -1.64
GCD6	YDR211W	SSN2	P38931	1420 aa		4.81	□□□□□ -1.64
GCD6	YDR211W	GYP5	Q12344	894 aa		4.81	□□□□□ -1.64
GCD6	YDR211W	SAP30	P38429	201 aa		4.8	□□□□□ -1.64
GCD6	YDR211W	YDL129W	Q07555	291 aa		4.8	□□□□□ -1.64
GCD6	YDR211W	SPA2	P23201	1466 aa	Known RBP	4.8	□□□□□ -1.64
GCD6	YDR211W	BCK2	P33306	851 aa		4.79	□□□□□ -1.64
GCD6	YDR211W	HTA1	P04911	132 aa	Known RBP	4.78	□□□□□ -1.64
GCD6	YDR211W	HTA2	P04912	132 aa		4.78	□□□□□ -1.64
GCD6	YDR211W	CHL1	P22516	861 aa	Predicted RBP	4.78	□□□□□ -1.64
GCD6	YDR211W	PTC3	P34221	468 aa	Known RBP	4.77	□□□□□ -1.65
GCD6	YDR211W	PTC4	P38089	393 aa		4.76	□□□□□ -1.65
GCD6	YDR211W	PRE3	P38624	215 aa		4.76	□□□□□ -1.65
GCD6	YDR211W	DCW1	P36091	449 aa		4.75	□□□□□ -1.65
GCD6	YDR211W	YEL023C	P39992	682 aa		4.75	□□□□□ -1.65
GCD6	YDR211W	SAS10	Q12136	610 aa	Predicted RBP	4.73	□□□□□ -1.65
GCD6	YDR211W	NOP53	Q12080	455 aa	Known RBP	4.73	□□□□□ -1.65
GCD6	YDR211W	GRE2	Q12068	342 aa	Known RBP	4.72	□□□□□ -1.65
GCD6	YDR211W	ATH1	P48016	1211 aa		4.71	□□□□□ -1.66
GCD6	YDR211W	VPS70	P47161	811 aa		4.7	□□□□□ -1.66
GCD6	YDR211W	YPR148C	Q06523	435 aa		4.7	□□□□□ -1.66
GCD6	YDR211W	INO80	P53115	1489 aa		4.7	□□□□□ -1.66
GCD6	YDR211W	GUT1	P32190	709 aa		4.69	□□□□□ -1.66
GCD6	YDR211W	IFH1	P39520	1085 aa		4.69	□□□□□ -1.66
GCD6	YDR211W	XDJ1	P39102	459 aa		4.67	□□□□□ -1.66
GCD6	YDR211W	SOL3	P38858	249 aa		4.67	□□□□□ -1.66
GCD6	YDR211W	PML39	Q03760	334 aa		4.66	□□□□□ -1.66
GCD6	YDR211W	VRP1	P37370	817 aa		4.65	□□□□□ -1.67
GCD6	YDR211W	YDR344C	Q05510	147 aa		4.64	□□□□□ -1.67
GCD6	YDR211W	NST1	P53935	1240 aa		4.64	□□□□□ -1.67
GCD6	YDR211W	YGR273C	P53329	174 aa		4.63	□□□□□ -1.67
GCD6	YDR211W	ELP4	Q02884	456 aa	Known RBP	4.63	□□□□□ -1.67
GCD6	YDR211W	VHR2	P40041	505 aa		4.61	□□□□□ -1.67
GCD6	YDR211W	CKB1	P43639	278 aa		4.61	□□□□□ -1.67
GCD6	YDR211W	ARH1	P48360	493 aa		4.61	□□□□□ -1.67
GCD6	YDR211W	UBP14	P38237	781 aa	Known RBP	4.61	□□□□□ -1.67
GCD6	YDR211W	TCB3	Q03640	1545 aa	Known RBP	4.61	□□□□□ -1.67
GCD6	YDR211W	REF2	P42073	533 aa	Predicted RBP	4.6	□□□□□ -1.67
GCD6	YDR211W	ILV3	P39522	585 aa	Known RBP	4.59	□□□□□ -1.67
GCD6	YDR211W	YLR326W	Q06170	240 aa	Known RBP	4.59	□□□□□ -1.67
GCD6	YDR211W	PBS2	P08018	668 aa		4.58	□□□□□ -1.68
GCD6	YDR211W	KEX1	P09620	729 aa		4.58	□□□□□ -1.68
GCD6	YDR211W	MPH3	P0CE00	602 aa		4.58	□□□□□ -1.68
GCD6	YDR211W	SPB4	P25808	606 aa	Predicted RBP	4.58	□□□□□ -1.68
GCD6	YDR211W	MID1	P41821	548 aa		4.58	□□□□□ -1.68
GCD6	YDR211W	AI4	P03878	556 aa		4.57	□□□□□ -1.68
GCD6	YDR211W	SPT23	P35210	1082 aa		4.57	□□□□□ -1.68
GCD6	YDR211W	YDR090C	Q03193	310 aa		4.57	□□□□□ -1.68
GCD6	YDR211W	TY1B-DR4	Q07793	1604 aa		4.57	□□□□□ -1.68
GCD6	YDR211W	DPS1	P04802	557 aa	Known RBP	4.57	□□□□□ -1.68
GCD6	YDR211W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
GCD6	YDR211W	HSL1	P34244	1518 aa		4.55	□□□□□ -1.68
GCD6	YDR211W	COX6	P00427	148 aa		4.54	□□□□□ -1.68
GCD6	YDR211W	DSF2	P38213	736 aa		4.54	□□□□□ -1.68
GCD6	YDR211W	PEX29	Q03370	554 aa		4.54	□□□□□ -1.68
GCD6	YDR211W	RAD54	P32863	898 aa		4.53	□□□□□ -1.68
GCD6	YDR211W	SLI15	P38283	698 aa		4.53	□□□□□ -1.68
GCD6	YDR211W	HAP5	Q02516	242 aa		4.53	□□□□□ -1.68
GCD6	YDR211W	SPT6	P23615	1451 aa	Known RBP	4.52	□□□□□ -1.69
GCD6	YDR211W	BNI4	P53858	892 aa		4.52	□□□□□ -1.69
GCD6	YDR211W	MAK21	Q12176	1025 aa	Known RBP	4.52	□□□□□ -1.69
GCD6	YDR211W	KIC1	P38692	1080 aa		4.51	□□□□□ -1.69
GCD6	YDR211W	YML082W	Q04533	649 aa	Known RBP	4.51	□□□□□ -1.69
GCD6	YDR211W	MAM3	Q12296	706 aa		4.51	□□□□□ -1.69
GCD6	YDR211W	IES2	P40154	320 aa		4.5	□□□□□ -1.69
GCD6	YDR211W	XRN1	P22147	1528 aa	Known RBP	4.49	□□□□□ -1.69
GCD6	YDR211W	LEU3	P08638	886 aa		4.49	□□□□□ -1.69
GCD6	YDR211W	PTC2	P39966	464 aa	Known RBP	4.49	□□□□□ -1.69
GCD6	YDR211W	MPC54	Q08550	464 aa		4.48	□□□□□ -1.69
GCD6	YDR211W	HIR3	P47171	1648 aa		4.48	□□□□□ -1.69
GCD6	YDR211W	NUP42	P49686	430 aa	Known RBP	4.48	□□□□□ -1.69
GCD6	YDR211W	SRC1	Q03707	834 aa		4.48	□□□□□ -1.69
GCD6	YDR211W	CDC73	Q06697	393 aa		4.48	□□□□□ -1.69
GCD6	YDR211W	DIT2	P21595	489 aa		4.47	□□□□□ -1.69
GCD6	YDR211W	ORC6	P38826	435 aa		4.45	□□□□□ -1.7
GCD6	YDR211W	TAF2	P23255	1407 aa		4.45	□□□□□ -1.7
GCD6	YDR211W	NMA111	P53920	997 aa		4.45	□□□□□ -1.7
GCD6	YDR211W	DPL1	Q05567	589 aa		4.44	□□□□□ -1.7
GCD6	YDR211W	GAP1	P19145	602 aa	Predicted RBP	4.42	□□□□□ -1.7
GCD6	YDR211W	REV3	P14284	1504 aa		4.42	□□□□□ -1.7
GCD6	YDR211W	SWR1	Q05471	1514 aa		4.41	□□□□□ -1.7
GCD6	YDR211W	RGR1	P19263	1082 aa		4.41	□□□□□ -1.7
GCD6	YDR211W	GLC3	P32775	704 aa		4.41	□□□□□ -1.7
GCD6	YDR211W	MVP1	P40959	511 aa	Known RBP	4.41	□□□□□ -1.7
GCD6	YDR211W	YNR021W	P53723	404 aa	Known RBP	4.41	□□□□□ -1.7
GCD6	YDR211W	SKI3	P17883	1432 aa	Known RBP	4.41	□□□□□ -1.7
GCD6	YDR211W	RPP1B	P10622	106 aa	Known RBP	4.4	□□□□□ -1.7
GCD6	YDR211W	RGA2	Q06407	1009 aa		4.4	□□□□□ -1.7
GCD6	YDR211W	PSE1	P32337	1089 aa	Known RBP	4.4	□□□□□ -1.71
GCD6	YDR211W	CSC1	Q06538	782 aa		4.4	□□□□□ -1.71
GCD6	YDR211W	MMS22	Q06164	1454 aa		4.39	□□□□□ -1.71
GCD6	YDR211W	RPN1	P38764	993 aa	Known RBP	4.39	□□□□□ -1.71
GCD6	YDR211W	ISU2	Q12056	156 aa		4.39	□□□□□ -1.71
GCD6	YDR211W	MON2	P48563	1636 aa	Predicted RBP	4.39	□□□□□ -1.71
GCD6	YDR211W	RAM1	P22007	431 aa		4.39	□□□□□ -1.71
GCD6	YDR211W	YPR015C	Q12531	247 aa		4.39	□□□□□ -1.71
GCD6	YDR211W	PEX21	P50091	288 aa		4.38	□□□□□ -1.71
GCD6	YDR211W	TUM1	Q08686	304 aa	Known RBP	4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms