RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP9YDL030W LDB19Q12502 818 aa9.63□□□□□ -0.87
PRP9YDL030W YPR148CQ06523 435 aa9.59□□□□□ -0.87
PRP9YDL030W YEL023CP39992 682 aa9.58□□□□□ -0.88
PRP9YDL030W JIP4Q03361 876 aa9.57□□□□□ -0.88
PRP9YDL030W VPS70P47161 811 aa9.56□□□□□ -0.88
PRP9YDL030W YNL035CP53962 389 aaKnown RBP9.56□□□□□ -0.88
PRP9YDL030W RTG1P32607 177 aa9.55□□□□□ -0.88
PRP9YDL030W SAS10Q12136 610 aaPredicted RBP9.55□□□□□ -0.88
PRP9YDL030W PTC4P38089 393 aa9.54□□□□□ -0.88
PRP9YDL030W SOL3P38858 249 aa9.52□□□□□ -0.89
PRP9YDL030W FKH1P40466 484 aa9.52□□□□□ -0.89
PRP9YDL030W YGR273CP53329 174 aa9.51□□□□□ -0.89
PRP9YDL030W SEC61P32915 480 aa9.5□□□□□ -0.89
PRP9YDL030W DAN4P47179 1161 aa9.49□□□□□ -0.89
PRP9YDL030W NST1P53935 1240 aa9.48□□□□□ -0.89
PRP9YDL030W NCR1Q12200 1170 aa9.48□□□□□ -0.89
PRP9YDL030W AIR2Q12476 344 aaKnown RBP9.47□□□□□ -0.89
PRP9YDL030W TFG1P41895 735 aaPredicted RBP9.46□□□□□ -0.89
PRP9YDL030W CKB1P43639 278 aa9.46□□□□□ -0.9
PRP9YDL030W AI4P03878 556 aa9.45□□□□□ -0.9
PRP9YDL030W MPH3P0CE00 602 aa9.44□□□□□ -0.9
PRP9YDL030W REF2P42073 533 aaPredicted RBP9.43□□□□□ -0.9
PRP9YDL030W VHR2P40041 505 aa9.41□□□□□ -0.9
PRP9YDL030W YJL171CP46992 396 aa9.41□□□□□ -0.9
PRP9YDL030W UBP14P38237 781 aaKnown RBP9.39□□□□□ -0.91
PRP9YDL030W KEX1P09620 729 aa9.38□□□□□ -0.91
PRP9YDL030W YLR326WQ06170 240 aaKnown RBP9.38□□□□□ -0.91
PRP9YDL030W ILV3P39522 585 aaKnown RBP9.37□□□□□ -0.91
PRP9YDL030W PML39Q03760 334 aa9.37□□□□□ -0.91
PRP9YDL030W YDL129WQ07555 291 aa9.36□□□□□ -0.91
PRP9YDL030W BMT6Q12291 365 aa9.34□□□□□ -0.91
PRP9YDL030W RAD54P32863 898 aa9.33□□□□□ -0.92
PRP9YDL030W PBS2P08018 668 aa9.32□□□□□ -0.92
PRP9YDL030W SAP30P38429 201 aa9.32□□□□□ -0.92
PRP9YDL030W KIC1P38692 1080 aa9.31□□□□□ -0.92
PRP9YDL030W MAK21Q12176 1025 aaKnown RBP9.31□□□□□ -0.92
PRP9YDL030W SPB4P25808 606 aaPredicted RBP9.3□□□□□ -0.92
PRP9YDL030W YDR090CQ03193 310 aa9.3□□□□□ -0.92
PRP9YDL030W PCS60P38137 543 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
PRP9YDL030W SLI15P38283 698 aa9.29□□□□□ -0.92
PRP9YDL030W MID1P41821 548 aa9.29□□□□□ -0.92
PRP9YDL030W COX6P00427 148 aa9.28□□□□□ -0.92
PRP9YDL030W PEX29Q03370 554 aa9.26□□□□□ -0.93
PRP9YDL030W DSF2P38213 736 aa9.24□□□□□ -0.93
PRP9YDL030W MAM3Q12296 706 aa9.21□□□□□ -0.93
PRP9YDL030W RPP1BP10622 106 aaKnown RBP9.2□□□□□ -0.94
PRP9YDL030W MPC54Q08550 464 aa9.2□□□□□ -0.94
PRP9YDL030W DPL1Q05567 589 aa9.18□□□□□ -0.94
PRP9YDL030W CDC73Q06697 393 aa9.16□□□□□ -0.94
PRP9YDL030W ARH1P48360 493 aa9.15□□□□□ -0.95
PRP9YDL030W ELP4Q02884 456 aaKnown RBP9.15□□□□□ -0.95
PRP9YDL030W PRE3P38624 215 aa9.13□□□□□ -0.95
PRP9YDL030W IES2P40154 320 aa9.13□□□□□ -0.95
PRP9YDL030W NMA111P53920 997 aa9.12□□□□□ -0.95
PRP9YDL030W CHL1P22516 861 aaPredicted RBP9.12□□□□□ -0.95
PRP9YDL030W HAP5Q02516 242 aa9.12□□□□□ -0.95
PRP9YDL030W YDR344CQ05510 147 aa9.12□□□□□ -0.95
PRP9YDL030W ORC6P38826 435 aa9.1□□□□□ -0.95
PRP9YDL030W ISU2Q12056 156 aa9.09□□□□□ -0.95
PRP9YDL030W CSC1Q06538 782 aa9.07□□□□□ -0.96
PRP9YDL030W PEX21P50091 288 aa9.07□□□□□ -0.96
PRP9YDL030W LEU3P08638 886 aa9.06□□□□□ -0.96
PRP9YDL030W NUP42P49686 430 aaKnown RBP9.06□□□□□ -0.96
PRP9YDL030W GAP1P19145 602 aaPredicted RBP9.04□□□□□ -0.96
PRP9YDL030W SPT23P35210 1082 aa9.04□□□□□ -0.96
PRP9YDL030W BNI4P53858 892 aa9.03□□□□□ -0.96
PRP9YDL030W TFB4Q12004 338 aa9.03□□□□□ -0.96
PRP9YDL030W DIT2P21595 489 aa9.03□□□□□ -0.96
PRP9YDL030W PSE1P32337 1089 aaKnown RBP9.03□□□□□ -0.96
PRP9YDL030W MVP1P40959 511 aaKnown RBP9.01□□□□□ -0.97
PRP9YDL030W RGR1P19263 1082 aa9□□□□□ -0.97
PRP9YDL030W TUM1Q08686 304 aaKnown RBP8.99□□□□□ -0.97
PRP9YDL030W PTC2P39966 464 aaKnown RBP8.98□□□□□ -0.97
PRP9YDL030W YRR1Q12172 810 aa8.98□□□□□ -0.97
PRP9YDL030W YNR021WP53723 404 aaKnown RBP8.97□□□□□ -0.97
PRP9YDL030W YPR109WQ06104 294 aa8.95□□□□□ -0.98
PRP9YDL030W PDR1P12383 1068 aa8.93□□□□□ -0.98
PRP9YDL030W YML082WQ04533 649 aaKnown RBP8.93□□□□□ -0.98
PRP9YDL030W CLB5P30283 435 aa8.91□□□□□ -0.98
PRP9YDL030W GLC3P32775 704 aa8.91□□□□□ -0.98
PRP9YDL030W ATF2P53296 535 aa8.91□□□□□ -0.98
PRP9YDL030W BCK2P33306 851 aa8.9□□□□□ -0.98
PRP9YDL030W VRP1P37370 817 aa8.89□□□□□ -0.99
PRP9YDL030W TEA1P47988 759 aa8.89□□□□□ -0.99
PRP9YDL030W RPN1P38764 993 aaKnown RBP8.88□□□□□ -0.99
PRP9YDL030W RAM1P22007 431 aa8.87□□□□□ -0.99
PRP9YDL030W NUD1P32336 851 aa8.86□□□□□ -0.99
PRP9YDL030W NPL4P33755 580 aa8.85□□□□□ -0.99
PRP9YDL030W AIM7Q12156 149 aa8.85□□□□□ -0.99
PRP9YDL030W YPR015CQ12531 247 aa8.85□□□□□ -0.99
PRP9YDL030W STR2P47164 639 aa8.8□□□□□ -1
PRP9YDL030W ISM1P48526 1002 aa8.8□□□□□ -1
PRP9YDL030W BUD20Q08004 166 aaPredicted RBP8.78□□□□□ -1
PRP9YDL030W NIS1P53939 407 aa8.78□□□□□ -1
PRP9YDL030W XDJ1P39102 459 aa8.77□□□□□ -1.01
PRP9YDL030W GYP1Q08484 637 aa8.77□□□□□ -1.01
PRP9YDL030W GCD11P32481 527 aaKnown RBP8.76□□□□□ -1.01
PRP9YDL030W YMR196WQ04336 1088 aa8.76□□□□□ -1.01
PRP9YDL030W PRT1P06103 763 aaKnown RBP8.75□□□□□ -1.01
PRP9YDL030W KIN1P13185 1064 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms