RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP9YDL030W MTC1P47018 478 aaKnown RBP16.1■□□□□ 0.17
PRP9YDL030W DRS1P32892 752 aaKnown RBP15.75■□□□□ 0.11
PRP9YDL030W FAP1P53971 965 aa13.77□□□□□ -0.21
PRP9YDL030W DIP2Q12220 943 aaPredicted RBP13.56□□□□□ -0.24
PRP9YDL030W BFR2Q06631 534 aaKnown RBP13.43□□□□□ -0.26
PRP9YDL030W ISW2Q08773 1120 aa13.24□□□□□ -0.29
PRP9YDL030W AVT3P36062 692 aa13.22□□□□□ -0.29
PRP9YDL030W PRI1P10363 409 aa13.19□□□□□ -0.3
PRP9YDL030W RPG1P38249 964 aaKnown RBP13.05□□□□□ -0.32
PRP9YDL030W AAD16Q02895 342 aa13.03□□□□□ -0.32
PRP9YDL030W RSE1Q04693 1361 aaKnown RBP12.92□□□□□ -0.34
PRP9YDL030W PRY3P47033 881 aa12.89□□□□□ -0.35
PRP9YDL030W TSR3Q12094 313 aaKnown RBP12.51□□□□□ -0.41
PRP9YDL030W RPL17AP05740 184 aaKnown RBP12.46□□□□□ -0.42
PRP9YDL030W RPL17BP46990 184 aaKnown RBP12.46□□□□□ -0.42
PRP9YDL030W REB1P21538 810 aa12.37□□□□□ -0.43
PRP9YDL030W TFA1P36100 482 aa12.3□□□□□ -0.44
PRP9YDL030W HAA1Q12753 694 aaKnown RBP12.13□□□□□ -0.47
PRP9YDL030W YCK3P39962 524 aa12.09□□□□□ -0.47
PRP9YDL030W MRPL32P25348 183 aa12.05□□□□□ -0.48
PRP9YDL030W SPT21P35209 758 aa11.93□□□□□ -0.5
PRP9YDL030W RIM101P33400 625 aa11.68□□□□□ -0.54
PRP9YDL030W YKR023WP36119 530 aaKnown RBP11.65□□□□□ -0.54
PRP9YDL030W CDC27P38042 758 aa11.51□□□□□ -0.57
PRP9YDL030W HOP09932 586 aa11.43□□□□□ -0.58
PRP9YDL030W TFC8Q12308 588 aa11.43□□□□□ -0.58
PRP9YDL030W YGL015CP33199 130 aa11.36□□□□□ -0.59
PRP9YDL030W DCD1P06773 312 aa11.35□□□□□ -0.59
PRP9YDL030W OXP1P28273 1286 aa11.29□□□□□ -0.6
PRP9YDL030W YIL055CP40523 627 aaKnown RBP11.21□□□□□ -0.61
PRP9YDL030W PTP3P40048 928 aa11.16□□□□□ -0.62
PRP9YDL030W UBP10P53874 792 aaPredicted RBP11.13□□□□□ -0.63
PRP9YDL030W YAH1Q12184 172 aaKnown RBP11.11□□□□□ -0.63
PRP9YDL030W MAP2P38174 421 aaKnown RBP11.09□□□□□ -0.63
PRP9YDL030W BCH2P36122 765 aa11.08□□□□□ -0.64
PRP9YDL030W SCY1P53009 804 aa11.01□□□□□ -0.65
PRP9YDL030W RSM7P47150 247 aa11□□□□□ -0.65
PRP9YDL030W SSP1P38871 571 aa10.99□□□□□ -0.65
PRP9YDL030W YLR271WQ06152 274 aa10.92□□□□□ -0.66
PRP9YDL030W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
PRP9YDL030W EPS1P40557 701 aa10.86□□□□□ -0.67
PRP9YDL030W AI2P03876 854 aa10.84□□□□□ -0.67
PRP9YDL030W SLX5P32828 619 aaKnown RBP10.84□□□□□ -0.67
PRP9YDL030W BBC1P47068 1157 aa10.84□□□□□ -0.67
PRP9YDL030W BDF1P35817 686 aa10.79□□□□□ -0.68
PRP9YDL030W TIF4632P39936 914 aaKnown RBP10.71□□□□□ -0.69
PRP9YDL030W PSD2P53037 1138 aaKnown RBP10.68□□□□□ -0.7
PRP9YDL030W MGA2P40578 1113 aa10.65□□□□□ -0.7
PRP9YDL030W TGL3P40308 642 aa10.61□□□□□ -0.71
PRP9YDL030W CST9Q06032 482 aa10.56□□□□□ -0.72
PRP9YDL030W MRM1P25270 412 aa10.49□□□□□ -0.73
PRP9YDL030W NSR1P27476 414 aaKnown RBP RIP-Chip data10.34□□□□□ -0.75not detected
PRP9YDL030W RTG3P38165 486 aa10.33□□□□□ -0.76
PRP9YDL030W YAP5P40574 245 aa10.31□□□□□ -0.76
PRP9YDL030W YOR238WQ08634 303 aa10.28□□□□□ -0.76
PRP9YDL030W RCR1P38212 213 aa10.24□□□□□ -0.77
PRP9YDL030W MST1P07236 462 aa10.22□□□□□ -0.77
PRP9YDL030W VPS29P38759 282 aa10.22□□□□□ -0.77
PRP9YDL030W YMR1P47147 688 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
PRP9YDL030W DBP1P24784 617 aaKnown RBP10.14□□□□□ -0.79
PRP9YDL030W PIB1Q06651 286 aa10.14□□□□□ -0.79
PRP9YDL030W RAM2P29703 316 aa10.12□□□□□ -0.79
PRP9YDL030W UBP9P39967 754 aa10.12□□□□□ -0.79
PRP9YDL030W STS1P38637 319 aa10.09□□□□□ -0.79
PRP9YDL030W YFR006WP43590 535 aa10.09□□□□□ -0.79
PRP9YDL030W BUD31P25337 157 aaPredicted RBP10.08□□□□□ -0.8
PRP9YDL030W GTT3P39996 337 aa10.08□□□□□ -0.8
PRP9YDL030W MAK11P20484 414 aaKnown RBP10.03□□□□□ -0.8
PRP9YDL030W RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
PRP9YDL030W YBL029C-AQ3E756 94 aa9.97□□□□□ -0.81
PRP9YDL030W DMA1P38823 416 aa9.97□□□□□ -0.81
PRP9YDL030W VMA1P17255 1071 aaKnown RBP9.96□□□□□ -0.82
PRP9YDL030W WSC3Q12215 556 aa9.96□□□□□ -0.82
PRP9YDL030W MIF2P35201 549 aa9.92□□□□□ -0.82
PRP9YDL030W VNX1P42839 908 aa9.9□□□□□ -0.82
PRP9YDL030W COQ8P27697 501 aa9.88□□□□□ -0.83
PRP9YDL030W SAM3Q08986 587 aa9.87□□□□□ -0.83
PRP9YDL030W YOL036WQ08206 761 aa9.84□□□□□ -0.83
PRP9YDL030W SPP1Q03012 353 aa9.84□□□□□ -0.83
PRP9YDL030W MSB4Q12317 492 aa9.84□□□□□ -0.83
PRP9YDL030W EDS1P38073 919 aa9.83□□□□□ -0.84
PRP9YDL030W SET1P38827 1080 aaKnown RBP9.83□□□□□ -0.84
PRP9YDL030W SET4P42948 560 aa9.83□□□□□ -0.84
PRP9YDL030W GYP5Q12344 894 aa9.8□□□□□ -0.84
PRP9YDL030W PTC3P34221 468 aaKnown RBP9.79□□□□□ -0.84
PRP9YDL030W TIF11P38912 153 aaKnown RBP9.79□□□□□ -0.84
PRP9YDL030W NOP53Q12080 455 aaKnown RBP9.78□□□□□ -0.84
PRP9YDL030W EAP1P36041 632 aaKnown RBP9.76□□□□□ -0.85
PRP9YDL030W GRE2Q12068 342 aaKnown RBP9.76□□□□□ -0.85
PRP9YDL030W ABP1P15891 592 aaKnown RBP9.75□□□□□ -0.85
PRP9YDL030W ULI1P43604 169 aa9.74□□□□□ -0.85
PRP9YDL030W ATH1P48016 1211 aa9.73□□□□□ -0.85
PRP9YDL030W SIS1P25294 352 aaKnown RBP9.7□□□□□ -0.86
PRP9YDL030W DCW1P36091 449 aa9.7□□□□□ -0.86
PRP9YDL030W GUT1P32190 709 aa9.69□□□□□ -0.86
PRP9YDL030W TRP5P00931 707 aaKnown RBP9.67□□□□□ -0.86
PRP9YDL030W HTA1P04911 132 aaKnown RBP9.67□□□□□ -0.86
PRP9YDL030W HTA2P04912 132 aa9.67□□□□□ -0.86
PRP9YDL030W IFH1P39520 1085 aa9.67□□□□□ -0.86
PRP9YDL030W IOC2Q12072 812 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms