RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeastyeast

Gene ECM1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM1YAL059W HTA2P04912 132 aa9.05□□□□□ -0.96
ECM1YAL059W TRP5P00931 707 aaKnown RBP9.04□□□□□ -0.96
ECM1YAL059W IOC2Q12072 812 aa9□□□□□ -0.97
ECM1YAL059W SOL3P38858 249 aa8.99□□□□□ -0.97
ECM1YAL059W CKB1P43639 278 aa8.98□□□□□ -0.97
ECM1YAL059W YGR273CP53329 174 aa8.98□□□□□ -0.97
ECM1YAL059W YEL023CP39992 682 aa8.97□□□□□ -0.97
ECM1YAL059W NST1P53935 1240 aa8.97□□□□□ -0.97
ECM1YAL059W LDB19Q12502 818 aa8.97□□□□□ -0.97
ECM1YAL059W REF2P42073 533 aaPredicted RBP8.93□□□□□ -0.98
ECM1YAL059W VHR2P40041 505 aa8.92□□□□□ -0.98
ECM1YAL059W YNL035CP53962 389 aaKnown RBP8.91□□□□□ -0.98
ECM1YAL059W JIP4Q03361 876 aa8.91□□□□□ -0.98
ECM1YAL059W RTG1P32607 177 aa8.9□□□□□ -0.98
ECM1YAL059W PTC4P38089 393 aa8.9□□□□□ -0.98
ECM1YAL059W SIS1P25294 352 aaKnown RBP8.89□□□□□ -0.99
ECM1YAL059W ILV3P39522 585 aaKnown RBP8.89□□□□□ -0.99
ECM1YAL059W DAN4P47179 1161 aa8.89□□□□□ -0.99
ECM1YAL059W MPH3P0CE00 602 aa8.88□□□□□ -0.99
ECM1YAL059W UBP14P38237 781 aaKnown RBP8.88□□□□□ -0.99
ECM1YAL059W FKH1P40466 484 aa8.88□□□□□ -0.99
ECM1YAL059W YLR326WQ06170 240 aaKnown RBP8.88□□□□□ -0.99
ECM1YAL059W AI4P03878 556 aa8.87□□□□□ -0.99
ECM1YAL059W KEX1P09620 729 aa8.87□□□□□ -0.99
ECM1YAL059W PBS2P08018 668 aa8.86□□□□□ -0.99
ECM1YAL059W SPB4P25808 606 aaPredicted RBP8.85□□□□□ -0.99
ECM1YAL059W SEC61P32915 480 aa8.83□□□□□ -1
ECM1YAL059W YDR090CQ03193 310 aa8.83□□□□□ -1
ECM1YAL059W RAD54P32863 898 aa8.81□□□□□ -1
ECM1YAL059W DSF2P38213 736 aa8.81□□□□□ -1
ECM1YAL059W MAK21Q12176 1025 aaKnown RBP8.81□□□□□ -1
ECM1YAL059W AIR2Q12476 344 aaKnown RBP8.8□□□□□ -1
ECM1YAL059W PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
ECM1YAL059W NCR1Q12200 1170 aa8.79□□□□□ -1
ECM1YAL059W COX6P00427 148 aa8.78□□□□□ -1
ECM1YAL059W KIC1P38692 1080 aa8.77□□□□□ -1.01
ECM1YAL059W MAM3Q12296 706 aa8.77□□□□□ -1.01
ECM1YAL059W LEU3P08638 886 aa8.76□□□□□ -1.01
ECM1YAL059W PML39Q03760 334 aa8.76□□□□□ -1.01
ECM1YAL059W SLI15P38283 698 aa8.75□□□□□ -1.01
ECM1YAL059W TFG1P41895 735 aaPredicted RBP8.75□□□□□ -1.01
ECM1YAL059W MID1P41821 548 aa8.73□□□□□ -1.01
ECM1YAL059W IES2P40154 320 aa8.72□□□□□ -1.01
ECM1YAL059W YDL129WQ07555 291 aa8.72□□□□□ -1.01
ECM1YAL059W SAP30P38429 201 aa8.67□□□□□ -1.02
ECM1YAL059W ORC6P38826 435 aa8.66□□□□□ -1.02
ECM1YAL059W YJL171CP46992 396 aa8.65□□□□□ -1.02
ECM1YAL059W NUP42P49686 430 aaKnown RBP8.65□□□□□ -1.02
ECM1YAL059W PEX29Q03370 554 aa8.65□□□□□ -1.02
ECM1YAL059W CDC73Q06697 393 aa8.65□□□□□ -1.02
ECM1YAL059W MPC54Q08550 464 aa8.65□□□□□ -1.02
ECM1YAL059W BMT6Q12291 365 aa8.65□□□□□ -1.02
ECM1YAL059W DIT2P21595 489 aa8.62□□□□□ -1.03
ECM1YAL059W DPL1Q05567 589 aa8.61□□□□□ -1.03
ECM1YAL059W RPP1BP10622 106 aaKnown RBP8.6□□□□□ -1.03
ECM1YAL059W YDR344CQ05510 147 aa8.59□□□□□ -1.03
ECM1YAL059W GAP1P19145 602 aaPredicted RBP8.57□□□□□ -1.04
ECM1YAL059W YNR021WP53723 404 aaKnown RBP8.57□□□□□ -1.04
ECM1YAL059W PSE1P32337 1089 aaKnown RBP8.56□□□□□ -1.04
ECM1YAL059W ARH1P48360 493 aa8.55□□□□□ -1.04
ECM1YAL059W CSC1Q06538 782 aa8.55□□□□□ -1.04
ECM1YAL059W GLC3P32775 704 aa8.54□□□□□ -1.04
ECM1YAL059W NMA111P53920 997 aa8.54□□□□□ -1.04
ECM1YAL059W HAP5Q02516 242 aa8.53□□□□□ -1.04
ECM1YAL059W RPN1P38764 993 aaKnown RBP8.52□□□□□ -1.05
ECM1YAL059W MVP1P40959 511 aaKnown RBP8.52□□□□□ -1.05
ECM1YAL059W PEX21P50091 288 aa8.52□□□□□ -1.05
ECM1YAL059W ELP4Q02884 456 aaKnown RBP8.52□□□□□ -1.05
ECM1YAL059W ISU2Q12056 156 aa8.52□□□□□ -1.05
ECM1YAL059W RGR1P19263 1082 aa8.51□□□□□ -1.05
ECM1YAL059W TFB4Q12004 338 aa8.51□□□□□ -1.05
ECM1YAL059W PRE3P38624 215 aa8.49□□□□□ -1.05
ECM1YAL059W LEO1P38439 464 aa8.47□□□□□ -1.05
ECM1YAL059W AIM7Q12156 149 aa8.46□□□□□ -1.06
ECM1YAL059W YRR1Q12172 810 aa8.46□□□□□ -1.06
ECM1YAL059W CHL1P22516 861 aaPredicted RBP8.45□□□□□ -1.06
ECM1YAL059W ATF2P53296 535 aa8.45□□□□□ -1.06
ECM1YAL059W BNI4P53858 892 aa8.45□□□□□ -1.06
ECM1YAL059W YPR109WQ06104 294 aa8.45□□□□□ -1.06
ECM1YAL059W TUM1Q08686 304 aaKnown RBP8.45□□□□□ -1.06
ECM1YAL059W SPT23P35210 1082 aa8.43□□□□□ -1.06
ECM1YAL059W PDR1P12383 1068 aa8.42□□□□□ -1.06
ECM1YAL059W CLB5P30283 435 aa8.42□□□□□ -1.06
ECM1YAL059W TEA1P47988 759 aa8.41□□□□□ -1.06
ECM1YAL059W KIN1P13185 1064 aa8.4□□□□□ -1.06
ECM1YAL059W PTC2P39966 464 aaKnown RBP8.38□□□□□ -1.07
ECM1YAL059W RAM1P22007 431 aa8.36□□□□□ -1.07
ECM1YAL059W NUD1P32336 851 aa8.36□□□□□ -1.07
ECM1YAL059W YPR015CQ12531 247 aa8.34□□□□□ -1.07
ECM1YAL059W NIS1P53939 407 aa8.33□□□□□ -1.08
ECM1YAL059W YML082WQ04533 649 aaKnown RBP8.33□□□□□ -1.08
ECM1YAL059W STR2P47164 639 aa8.32□□□□□ -1.08
ECM1YAL059W ISM1P48526 1002 aa8.3□□□□□ -1.08
ECM1YAL059W NPL4P33755 580 aa8.29□□□□□ -1.08
ECM1YAL059W FPK1P53739 893 aa8.29□□□□□ -1.08
ECM1YAL059W YMR196WQ04336 1088 aa8.29□□□□□ -1.08
ECM1YAL059W KEX2P13134 814 aa8.26□□□□□ -1.09
ECM1YAL059W SIT4P20604 311 aa8.26□□□□□ -1.09
ECM1YAL059W BCK2P33306 851 aa8.26□□□□□ -1.09
ECM1YAL059W VRP1P37370 817 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms