RNA–Protein interactions for RNA: ENST00000640998.1

SCP2-217, Transcript of sterol carrier protein 2, humanhuman

TSL 5 BASIC

Gene SCP2, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-217ENST00000640998 NUP160Q12769 1436 aa24.02■■□□□ 1.44
SCP2-217ENST00000640998 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
SCP2-217ENST00000640998 CHD1O14646 1710 aa23.99■■□□□ 1.43
SCP2-217ENST00000640998 FBLN2P98095 1184 aa23.99■■□□□ 1.43
SCP2-217ENST00000640998 CEP170Q5SW79 1584 aa23.98■■□□□ 1.43
SCP2-217ENST00000640998 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
SCP2-217ENST00000640998 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
SCP2-217ENST00000640998 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
SCP2-217ENST00000640998 UGGT2Q9NYU1 1516 aa23.89■■□□□ 1.42
SCP2-217ENST00000640998 SAMD9Q5K651 1589 aa23.87■■□□□ 1.41
SCP2-217ENST00000640998 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
SCP2-217ENST00000640998 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
SCP2-217ENST00000640998 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
SCP2-217ENST00000640998 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
SCP2-217ENST00000640998 JPH4Q96JJ6 628 aa23.77■■□□□ 1.4
SCP2-217ENST00000640998 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
SCP2-217ENST00000640998 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
SCP2-217ENST00000640998 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
SCP2-217ENST00000640998 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
SCP2-217ENST00000640998 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
SCP2-217ENST00000640998 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
SCP2-217ENST00000640998 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
SCP2-217ENST00000640998 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
SCP2-217ENST00000640998 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
SCP2-217ENST00000640998 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
SCP2-217ENST00000640998 FYCO1Q9BQS8 1478 aa23.58■■□□□ 1.37
SCP2-217ENST00000640998 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
SCP2-217ENST00000640998 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
SCP2-217ENST00000640998 APLP2Q06481 763 aa23.5■■□□□ 1.35
SCP2-217ENST00000640998 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
SCP2-217ENST00000640998 PTPRGP23470 1445 aa23.48■■□□□ 1.35
SCP2-217ENST00000640998 HECW1Q76N89 1606 aa23.47■■□□□ 1.35
SCP2-217ENST00000640998 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.34
SCP2-217ENST00000640998 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
SCP2-217ENST00000640998 ABCA8O94911 1581 aa23.43■■□□□ 1.34
SCP2-217ENST00000640998 CFAP43Q8NDM7 1665 aa23.42■■□□□ 1.34
SCP2-217ENST00000640998 CCDC18Q5T9S5 1454 aa23.42■■□□□ 1.34
SCP2-217ENST00000640998 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
SCP2-217ENST00000640998 LRRIQ1Q96JM4 1722 aa23.38■■□□□ 1.33
SCP2-217ENST00000640998 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
SCP2-217ENST00000640998 EPRSP07814 1512 aaKnown RBP23.37■■□□□ 1.33
SCP2-217ENST00000640998 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
SCP2-217ENST00000640998 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
SCP2-217ENST00000640998 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
SCP2-217ENST00000640998 UHRF1BP1LA0JNW5 1464 aa23.32■■□□□ 1.32
SCP2-217ENST00000640998 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
SCP2-217ENST00000640998 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
SCP2-217ENST00000640998 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
SCP2-217ENST00000640998 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
SCP2-217ENST00000640998 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
SCP2-217ENST00000640998 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
SCP2-217ENST00000640998 ATP10BO94823 1461 aa23.24■■□□□ 1.31
SCP2-217ENST00000640998 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
SCP2-217ENST00000640998 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
SCP2-217ENST00000640998 MTUS2Q5JR59 1369 aa23.22■■□□□ 1.31
SCP2-217ENST00000640998 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
SCP2-217ENST00000640998 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
SCP2-217ENST00000640998 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
SCP2-217ENST00000640998 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
SCP2-217ENST00000640998 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
SCP2-217ENST00000640998 KDM5BQ9UGL1 1544 aa23.18■■□□□ 1.3
SCP2-217ENST00000640998 ADCY10Q96PN6 1610 aa23.17■■□□□ 1.3
SCP2-217ENST00000640998 SUPT6HQ7KZ85 1726 aaKnown RBP23.14■■□□□ 1.3
SCP2-217ENST00000640998 TROQ12816 1431 aaPredicted RBP23.14■■□□□ 1.29
SCP2-217ENST00000640998 ARID3CA6NKF2 412 aa23.13■■□□□ 1.29
SCP2-217ENST00000640998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
SCP2-217ENST00000640998 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
SCP2-217ENST00000640998 ZCCHC11Q5TAX3 1644 aaKnown RBP23.11■■□□□ 1.29
SCP2-217ENST00000640998 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
SCP2-217ENST00000640998 NCOA2Q15596 1464 aa23.09■■□□□ 1.29
SCP2-217ENST00000640998 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
SCP2-217ENST00000640998 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
SCP2-217ENST00000640998 KIF14Q15058 1648 aa23■■□□□ 1.27
SCP2-217ENST00000640998 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
SCP2-217ENST00000640998 NPM1P06748 294 aaKnown RBP eCLIP22.99■■□□□ 1.27
SCP2-217ENST00000640998 CYB5RLQ6IPT4 315 aa22.98■■□□□ 1.27
SCP2-217ENST00000640998 PCGF6Q9BYE7 350 aa22.97■■□□□ 1.27
SCP2-217ENST00000640998 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
SCP2-217ENST00000640998 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
SCP2-217ENST00000640998 FGD6Q6ZV73 1430 aa22.95■■□□□ 1.26
SCP2-217ENST00000640998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
SCP2-217ENST00000640998 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
SCP2-217ENST00000640998 MIA2Q96PC5 1412 aa22.94■■□□□ 1.26
SCP2-217ENST00000640998 ASXL2Q76L83 1435 aa22.92■■□□□ 1.26
SCP2-217ENST00000640998 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
SCP2-217ENST00000640998 MAPKBP1O60336 1514 aa22.89■■□□□ 1.26
SCP2-217ENST00000640998 GPATCH8Q9UKJ3 1502 aaKnown RBP22.89■■□□□ 1.26
SCP2-217ENST00000640998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.25
SCP2-217ENST00000640998 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
SCP2-217ENST00000640998 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
SCP2-217ENST00000640998 PTPN23Q9H3S7 1636 aa22.85■■□□□ 1.25
SCP2-217ENST00000640998 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
SCP2-217ENST00000640998 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
SCP2-217ENST00000640998 PREX2Q70Z35 1606 aa22.82■■□□□ 1.24
SCP2-217ENST00000640998 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
SCP2-217ENST00000640998 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
SCP2-217ENST00000640998 CFDP1Q9UEE9 299 aaPredicted RBP22.8■■□□□ 1.24
SCP2-217ENST00000640998 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
SCP2-217ENST00000640998 ARAP3Q8WWN8 1544 aa22.79■■□□□ 1.24
SCP2-217ENST00000640998 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms