RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 MAP3K1Q13233 1512 aa31.05■■■□□ 2.56
SP3-208ENST00000640958 CCER1Q8TC90 406 aaPredicted RBP31.04■■■□□ 2.56
SP3-208ENST00000640958 TIAM1Q13009 1591 aa31.02■■■□□ 2.56
SP3-208ENST00000640958 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.55
SP3-208ENST00000640958 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
SP3-208ENST00000640958 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
SP3-208ENST00000640958 FHOD3Q2V2M9 1422 aa30.96■■■□□ 2.55
SP3-208ENST00000640958 CFAP43Q8NDM7 1665 aa30.96■■■□□ 2.55
SP3-208ENST00000640958 ADAMTS12P58397 1594 aa30.95■■■□□ 2.55
SP3-208ENST00000640958 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.545e-11■■■■■ 30.3
SP3-208ENST00000640958 SAMD9Q5K651 1589 aa30.94■■■□□ 2.54
SP3-208ENST00000640958 HNRNPUL2Q1KMD3 747 aaKnown RBP30.91■■■□□ 2.54
SP3-208ENST00000640958 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
SP3-208ENST00000640958 RRBP1Q9P2E9 1410 aaKnown RBP30.91■■■□□ 2.54
SP3-208ENST00000640958 GRIN2BQ13224 1484 aa30.89■■■□□ 2.53
SP3-208ENST00000640958 P3H3Q8IVL6 736 aa30.88■■■□□ 2.53
SP3-208ENST00000640958 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
SP3-208ENST00000640958 FYCO1Q9BQS8 1478 aa30.87■■■□□ 2.53
SP3-208ENST00000640958 ZNF608Q9ULD9 1512 aaPredicted RBP30.86■■■□□ 2.53
SP3-208ENST00000640958 LRRC9Q6ZRR7 1453 aa30.84■■■□□ 2.53
SP3-208ENST00000640958 CASKIN1Q8WXD9 1431 aa30.83■■■□□ 2.53
SP3-208ENST00000640958 FMN1Q68DA7 1419 aa30.79■■■□□ 2.52
SP3-208ENST00000640958 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
SP3-208ENST00000640958 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
SP3-208ENST00000640958 CCNB3Q8WWL7 1395 aa30.73■■■□□ 2.51
SP3-208ENST00000640958 IQGAP2Q13576 1575 aa30.73■■■□□ 2.51
SP3-208ENST00000640958 LRRIQ1Q96JM4 1722 aa30.66■■■□□ 2.5
SP3-208ENST00000640958 PHLDB1Q86UU1 1377 aa30.62■■■□□ 2.49
SP3-208ENST00000640958 ATP1B4Q9UN42 357 aaPredicted RBP30.61■■■□□ 2.49
SP3-208ENST00000640958 UGGT2Q9NYU1 1516 aa30.57■■■□□ 2.48
SP3-208ENST00000640958 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
SP3-208ENST00000640958 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
SP3-208ENST00000640958 KIAA0586Q9BVV6 1533 aa30.51■■■□□ 2.47
SP3-208ENST00000640958 HECW1Q76N89 1606 aa30.46■■■□□ 2.47
SP3-208ENST00000640958 DHX57Q6P158 1386 aaKnown RBP30.44■■■□□ 2.46
SP3-208ENST00000640958 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
SP3-208ENST00000640958 KIAA0556O60303 1618 aa30.43■■■□□ 2.46
SP3-208ENST00000640958 CCDC18Q5T9S5 1454 aa30.42■■■□□ 2.46
SP3-208ENST00000640958 EHBP1L1Q8N3D4 1523 aa30.41■■■□□ 2.46
SP3-208ENST00000640958 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
SP3-208ENST00000640958 DISP1Q96F81 1524 aa30.39■■■□□ 2.46
SP3-208ENST00000640958 CEP170Q5SW79 1584 aa30.39■■■□□ 2.46
SP3-208ENST00000640958 SUPT6HQ7KZ85 1726 aaKnown RBP30.37■■■□□ 2.45
SP3-208ENST00000640958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.37■■■□□ 2.45
SP3-208ENST00000640958 ITGAEP38570 1179 aa30.37■■■□□ 2.45
SP3-208ENST00000640958 CLSPNQ9HAW4 1339 aa30.36■■■□□ 2.45
SP3-208ENST00000640958 MAGI3Q5TCQ9 1506 aa30.34■■■□□ 2.45
SP3-208ENST00000640958 FGD6Q6ZV73 1430 aa30.34■■■□□ 2.45
SP3-208ENST00000640958 NCOA2Q15596 1464 aa30.33■■■□□ 2.45
SP3-208ENST00000640958 EPRSP07814 1512 aaKnown RBP30.32■■■□□ 2.44
SP3-208ENST00000640958 FAM50AQ14320 339 aaKnown RBP30.31■■■□□ 2.44
SP3-208ENST00000640958 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
SP3-208ENST00000640958 NUP160Q12769 1436 aa30.28■■■□□ 2.44
SP3-208ENST00000640958 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
SP3-208ENST00000640958 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
SP3-208ENST00000640958 SETD5Q9C0A6 1442 aa30.25■■■□□ 2.43
SP3-208ENST00000640958 CDK13Q14004 1512 aaKnown RBP30.25■■■□□ 2.43
SP3-208ENST00000640958 MYOM3Q5VTT5 1437 aa30.25■■■□□ 2.43
SP3-208ENST00000640958 RAPGEF6Q8TEU7 1601 aa30.21■■■□□ 2.43
SP3-208ENST00000640958 FBLN2P98095 1184 aa30.15■■■□□ 2.42
SP3-208ENST00000640958 NUP153P49790 1475 aaKnown RBP30.15■■■□□ 2.42
SP3-208ENST00000640958 PTPN23Q9H3S7 1636 aa30.14■■■□□ 2.42
SP3-208ENST00000640958 MAPKBP1O60336 1514 aa30.11■■■□□ 2.41
SP3-208ENST00000640958 TCOF1Q13428 1488 aaKnown RBP30.08■■■□□ 2.41
SP3-208ENST00000640958 ZNF316A6NFI3 1004 aaPredicted RBP30.07■■■□□ 2.4
SP3-208ENST00000640958 PTPRKQ15262 1439 aa30.06■■■□□ 2.4
SP3-208ENST00000640958 CARMIL2Q6F5E8 1435 aa30.06■■■□□ 2.4
SP3-208ENST00000640958 JPH4Q96JJ6 628 aa30.03■■■□□ 2.4
SP3-208ENST00000640958 CHD1O14646 1710 aa30.01■■■□□ 2.4
SP3-208ENST00000640958 ARID3CA6NKF2 412 aa30.01■■■□□ 2.39
SP3-208ENST00000640958 HFM1A2PYH4 1435 aa30■■■□□ 2.39
SP3-208ENST00000640958 PLB1Q6P1J6 1458 aa30■■■□□ 2.39
SP3-208ENST00000640958 MIA2Q96PC5 1412 aa29.99■■■□□ 2.39
SP3-208ENST00000640958 DIEXFQ68CQ4 756 aaKnown RBP29.97■■■□□ 2.39
SP3-208ENST00000640958 ABCA8O94911 1581 aa29.92■■■□□ 2.38
SP3-208ENST00000640958 NAIPQ13075 1403 aa29.91■■■□□ 2.38
SP3-208ENST00000640958 ADCY10Q96PN6 1610 aa29.88■■■□□ 2.37
SP3-208ENST00000640958 GCC2Q8IWJ2 1684 aa29.88■■■□□ 2.37
SP3-208ENST00000640958 TROQ12816 1431 aaPredicted RBP29.88■■■□□ 2.37
SP3-208ENST00000640958 CDK11AQ9UQ88 783 aaPredicted RBP29.86■■■□□ 2.37
SP3-208ENST00000640958 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
SP3-208ENST00000640958 PRG4Q92954 1404 aaPredicted RBP29.84■■■□□ 2.37
SP3-208ENST00000640958 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
SP3-208ENST00000640958 UACAQ9BZF9 1416 aa29.81■■■□□ 2.36
SP3-208ENST00000640958 ITSN2Q9NZM3 1697 aa29.8■■■□□ 2.36
SP3-208ENST00000640958 KIF14Q15058 1648 aa29.8■■■□□ 2.36
SP3-208ENST00000640958 DNMT1P26358 1616 aaKnown RBP29.78■■■□□ 2.36
SP3-208ENST00000640958 ATP10BO94823 1461 aa29.72■■■□□ 2.35
SP3-208ENST00000640958 DAPK1P53355 1430 aa29.72■■■□□ 2.35
SP3-208ENST00000640958 PTPRGP23470 1445 aa29.69■■■□□ 2.34
SP3-208ENST00000640958 GPATCH8Q9UKJ3 1502 aaKnown RBP29.69■■■□□ 2.34
SP3-208ENST00000640958 SIN3AQ96ST3 1273 aa29.69■■■□□ 2.34
SP3-208ENST00000640958 KDM6BO15054 1643 aa29.69■■■□□ 2.34
SP3-208ENST00000640958 CHIC2Q9UKJ5 165 aa29.68■■■□□ 2.34
SP3-208ENST00000640958 ABCC5O15440 1437 aa29.67■■■□□ 2.34
SP3-208ENST00000640958 RRP7BPQ9NSQ0 103 aa29.67■■■□□ 2.34
SP3-208ENST00000640958 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
SP3-208ENST00000640958 ROCK1Q13464 1354 aa29.65■■■□□ 2.34
SP3-208ENST00000640958 CDC42BPAQ5VT25 1732 aa29.64■■■□□ 2.34
SP3-208ENST00000640958 ZNF644Q9H582 1327 aaPredicted RBP29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms