RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
KCNMA1-280ENST00000640311 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
KCNMA1-280ENST00000640311 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
KCNMA1-280ENST00000640311 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
KCNMA1-280ENST00000640311 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
KCNMA1-280ENST00000640311 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
KCNMA1-280ENST00000640311 KIAA0586Q9BVV6 1533 aa16.92■□□□□ 0.3
KCNMA1-280ENST00000640311 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
KCNMA1-280ENST00000640311 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
KCNMA1-280ENST00000640311 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-280ENST00000640311 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
KCNMA1-280ENST00000640311 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
KCNMA1-280ENST00000640311 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
KCNMA1-280ENST00000640311 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
KCNMA1-280ENST00000640311 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
KCNMA1-280ENST00000640311 EEA1Q15075 1411 aa16.81■□□□□ 0.28
KCNMA1-280ENST00000640311 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
KCNMA1-280ENST00000640311 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
KCNMA1-280ENST00000640311 PTPRGP23470 1445 aa16.72■□□□□ 0.27
KCNMA1-280ENST00000640311 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
KCNMA1-280ENST00000640311 TNIKQ9UKE5 1360 aa16.71■□□□□ 0.27
KCNMA1-280ENST00000640311 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
KCNMA1-280ENST00000640311 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
KCNMA1-280ENST00000640311 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
KCNMA1-280ENST00000640311 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
KCNMA1-280ENST00000640311 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-280ENST00000640311 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
KCNMA1-280ENST00000640311 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
KCNMA1-280ENST00000640311 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
KCNMA1-280ENST00000640311 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
KCNMA1-280ENST00000640311 KIF21BO75037 1637 aa16.61■□□□□ 0.25
KCNMA1-280ENST00000640311 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
KCNMA1-280ENST00000640311 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
KCNMA1-280ENST00000640311 ABCC2Q92887 1545 aa16.55■□□□□ 0.24
KCNMA1-280ENST00000640311 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
KCNMA1-280ENST00000640311 MSH5O43196 834 aa16.53■□□□□ 0.24
KCNMA1-280ENST00000640311 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
KCNMA1-280ENST00000640311 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
KCNMA1-280ENST00000640311 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
KCNMA1-280ENST00000640311 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
KCNMA1-280ENST00000640311 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
KCNMA1-280ENST00000640311 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
KCNMA1-280ENST00000640311 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
KCNMA1-280ENST00000640311 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
KCNMA1-280ENST00000640311 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
KCNMA1-280ENST00000640311 ABCA8O94911 1581 aa16.45■□□□□ 0.22
KCNMA1-280ENST00000640311 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
KCNMA1-280ENST00000640311 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-280ENST00000640311 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
KCNMA1-280ENST00000640311 DIP2BQ9P265 1576 aa16.43■□□□□ 0.22
KCNMA1-280ENST00000640311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
KCNMA1-280ENST00000640311 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
KCNMA1-280ENST00000640311 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
KCNMA1-280ENST00000640311 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
KCNMA1-280ENST00000640311 WDR7Q9Y4E6 1490 aa16.36■□□□□ 0.21
KCNMA1-280ENST00000640311 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
KCNMA1-280ENST00000640311 ATP10BO94823 1461 aa16.35■□□□□ 0.21
KCNMA1-280ENST00000640311 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
KCNMA1-280ENST00000640311 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
KCNMA1-280ENST00000640311 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
KCNMA1-280ENST00000640311 GLI2P10070 1586 aa16.32■□□□□ 0.2
KCNMA1-280ENST00000640311 NUP153P49790 1475 aaKnown RBP16.32■□□□□ 0.2
KCNMA1-280ENST00000640311 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
KCNMA1-280ENST00000640311 PIAS4Q8N2W9 510 aaPredicted RBP16.31■□□□□ 0.2
KCNMA1-280ENST00000640311 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.2
KCNMA1-280ENST00000640311 CLIP1P30622 1438 aa16.27■□□□□ 0.19
KCNMA1-280ENST00000640311 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
KCNMA1-280ENST00000640311 CD109Q6YHK3 1445 aa16.25■□□□□ 0.19
KCNMA1-280ENST00000640311 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
KCNMA1-280ENST00000640311 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
KCNMA1-280ENST00000640311 KDM6BO15054 1643 aa16.23■□□□□ 0.19
KCNMA1-280ENST00000640311 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
KCNMA1-280ENST00000640311 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
KCNMA1-280ENST00000640311 PPRC1Q5VV67 1664 aaKnown RBP16.21■□□□□ 0.18
KCNMA1-280ENST00000640311 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
KCNMA1-280ENST00000640311 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
KCNMA1-280ENST00000640311 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
KCNMA1-280ENST00000640311 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
KCNMA1-280ENST00000640311 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
KCNMA1-280ENST00000640311 PCF11O94913 1555 aaKnown RBP16.16■□□□□ 0.18
KCNMA1-280ENST00000640311 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
KCNMA1-280ENST00000640311 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
KCNMA1-280ENST00000640311 COL17A1Q9UMD9 1497 aaPredicted RBP16.11■□□□□ 0.17
KCNMA1-280ENST00000640311 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
KCNMA1-280ENST00000640311 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
KCNMA1-280ENST00000640311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
KCNMA1-280ENST00000640311 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.17
KCNMA1-280ENST00000640311 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-280ENST00000640311 TTC37Q6PGP7 1564 aa16.06■□□□□ 0.16
KCNMA1-280ENST00000640311 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
KCNMA1-280ENST00000640311 NEO1Q92859 1461 aa16.05■□□□□ 0.16
KCNMA1-280ENST00000640311 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
KCNMA1-280ENST00000640311 KIF14Q15058 1648 aa16.05■□□□□ 0.16
KCNMA1-280ENST00000640311 FANCAO15360 1455 aa16.04■□□□□ 0.16
KCNMA1-280ENST00000640311 ARAP3Q8WWN8 1544 aa16.03■□□□□ 0.16
KCNMA1-280ENST00000640311 RAPGEF3O95398 923 aa16.02■□□□□ 0.16
KCNMA1-280ENST00000640311 PLCH2O75038 1416 aa16.02■□□□□ 0.15
KCNMA1-280ENST00000640311 AKNAQ7Z591 1439 aa16.02■□□□□ 0.15
KCNMA1-280ENST00000640311 ADRA2BP18089 450 aa16.01■□□□□ 0.15
KCNMA1-280ENST00000640311 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms