RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
KCNMA1-280ENST00000640311 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
KCNMA1-280ENST00000640311 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
KCNMA1-280ENST00000640311 ABCC9O60706 1549 aa21.36■■□□□ 1.01
KCNMA1-280ENST00000640311 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
KCNMA1-280ENST00000640311 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
KCNMA1-280ENST00000640311 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
KCNMA1-280ENST00000640311 NACADO15069 1562 aa20.42■□□□□ 0.86
KCNMA1-280ENST00000640311 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-280ENST00000640311 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
KCNMA1-280ENST00000640311 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
KCNMA1-280ENST00000640311 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
KCNMA1-280ENST00000640311 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
KCNMA1-280ENST00000640311 SCRIBQ14160 1630 aa19.85■□□□□ 0.77
KCNMA1-280ENST00000640311 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
KCNMA1-280ENST00000640311 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
KCNMA1-280ENST00000640311 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
KCNMA1-280ENST00000640311 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
KCNMA1-280ENST00000640311 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
KCNMA1-280ENST00000640311 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
KCNMA1-280ENST00000640311 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
KCNMA1-280ENST00000640311 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
KCNMA1-280ENST00000640311 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
KCNMA1-280ENST00000640311 NCAPD3P42695 1498 aa18.85■□□□□ 0.61
KCNMA1-280ENST00000640311 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
KCNMA1-280ENST00000640311 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
KCNMA1-280ENST00000640311 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
KCNMA1-280ENST00000640311 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
KCNMA1-280ENST00000640311 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
KCNMA1-280ENST00000640311 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
KCNMA1-280ENST00000640311 WIZO95785 1651 aa18.62■□□□□ 0.57
KCNMA1-280ENST00000640311 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
KCNMA1-280ENST00000640311 NESP48681 1621 aa18.45■□□□□ 0.54
KCNMA1-280ENST00000640311 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
KCNMA1-280ENST00000640311 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
KCNMA1-280ENST00000640311 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
KCNMA1-280ENST00000640311 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
KCNMA1-280ENST00000640311 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
KCNMA1-280ENST00000640311 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
KCNMA1-280ENST00000640311 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
KCNMA1-280ENST00000640311 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
KCNMA1-280ENST00000640311 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
KCNMA1-280ENST00000640311 CUX2O14529 1486 aa18.19■□□□□ 0.5
KCNMA1-280ENST00000640311 CFTRP13569 1480 aa18.19■□□□□ 0.5
KCNMA1-280ENST00000640311 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
KCNMA1-280ENST00000640311 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
KCNMA1-280ENST00000640311 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
KCNMA1-280ENST00000640311 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
KCNMA1-280ENST00000640311 WDR62O43379 1518 aa17.99■□□□□ 0.47
KCNMA1-280ENST00000640311 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
KCNMA1-280ENST00000640311 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
KCNMA1-280ENST00000640311 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
KCNMA1-280ENST00000640311 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
KCNMA1-280ENST00000640311 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
KCNMA1-280ENST00000640311 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
KCNMA1-280ENST00000640311 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
KCNMA1-280ENST00000640311 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-280ENST00000640311 CUX1P39880 1505 aa17.65■□□□□ 0.42
KCNMA1-280ENST00000640311 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-280ENST00000640311 SOGA1O94964 1423 aa17.63■□□□□ 0.41
KCNMA1-280ENST00000640311 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
KCNMA1-280ENST00000640311 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
KCNMA1-280ENST00000640311 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
KCNMA1-280ENST00000640311 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
KCNMA1-280ENST00000640311 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
KCNMA1-280ENST00000640311 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
KCNMA1-280ENST00000640311 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-280ENST00000640311 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
KCNMA1-280ENST00000640311 FOXD1Q16676 465 aa17.49■□□□□ 0.39
KCNMA1-280ENST00000640311 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
KCNMA1-280ENST00000640311 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
KCNMA1-280ENST00000640311 FBLN2P98095 1184 aa17.46■□□□□ 0.39
KCNMA1-280ENST00000640311 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
KCNMA1-280ENST00000640311 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
KCNMA1-280ENST00000640311 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
KCNMA1-280ENST00000640311 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
KCNMA1-280ENST00000640311 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
KCNMA1-280ENST00000640311 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
KCNMA1-280ENST00000640311 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
KCNMA1-280ENST00000640311 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
KCNMA1-280ENST00000640311 CHD1O14646 1710 aa17.33■□□□□ 0.37
KCNMA1-280ENST00000640311 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
KCNMA1-280ENST00000640311 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
KCNMA1-280ENST00000640311 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
KCNMA1-280ENST00000640311 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
KCNMA1-280ENST00000640311 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
KCNMA1-280ENST00000640311 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
KCNMA1-280ENST00000640311 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
KCNMA1-280ENST00000640311 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
KCNMA1-280ENST00000640311 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
KCNMA1-280ENST00000640311 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
KCNMA1-280ENST00000640311 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
KCNMA1-280ENST00000640311 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
KCNMA1-280ENST00000640311 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
KCNMA1-280ENST00000640311 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
KCNMA1-280ENST00000640311 IGF1RP08069 1367 aa17.12■□□□□ 0.33
KCNMA1-280ENST00000640311 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
KCNMA1-280ENST00000640311 CEP170Q5SW79 1584 aa17.07■□□□□ 0.32
KCNMA1-280ENST00000640311 NUP160Q12769 1436 aa17.07■□□□□ 0.32
KCNMA1-280ENST00000640311 CUL7Q14999 1698 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms