RNA–Protein interactions for RNA: ENST00000639823.1

KCNMA1-271, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-271ENST00000639823 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
KCNMA1-271ENST00000639823 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.46
KCNMA1-271ENST00000639823 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-271ENST00000639823 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-271ENST00000639823 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-271ENST00000639823 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
KCNMA1-271ENST00000639823 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
KCNMA1-271ENST00000639823 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
KCNMA1-271ENST00000639823 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
KCNMA1-271ENST00000639823 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
KCNMA1-271ENST00000639823 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
KCNMA1-271ENST00000639823 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.47
KCNMA1-271ENST00000639823 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
KCNMA1-271ENST00000639823 CHD1O14646 1710 aa12.11□□□□□ -0.47
KCNMA1-271ENST00000639823 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
KCNMA1-271ENST00000639823 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
KCNMA1-271ENST00000639823 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
KCNMA1-271ENST00000639823 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
KCNMA1-271ENST00000639823 CEP170Q5SW79 1584 aa12.07□□□□□ -0.48
KCNMA1-271ENST00000639823 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-271ENST00000639823 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
KCNMA1-271ENST00000639823 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
KCNMA1-271ENST00000639823 CLIP1P30622 1438 aa12.03□□□□□ -0.48
KCNMA1-271ENST00000639823 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-271ENST00000639823 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
KCNMA1-271ENST00000639823 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-271ENST00000639823 SAMD9Q5K651 1589 aa12.03□□□□□ -0.48
KCNMA1-271ENST00000639823 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
KCNMA1-271ENST00000639823 APLP2Q06481 763 aa12.01□□□□□ -0.49
KCNMA1-271ENST00000639823 GRIN2AQ12879 1464 aa12.01□□□□□ -0.49
KCNMA1-271ENST00000639823 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
KCNMA1-271ENST00000639823 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
KCNMA1-271ENST00000639823 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
KCNMA1-271ENST00000639823 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
KCNMA1-271ENST00000639823 NUP160Q12769 1436 aa11.96□□□□□ -0.5
KCNMA1-271ENST00000639823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.5
KCNMA1-271ENST00000639823 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
KCNMA1-271ENST00000639823 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
KCNMA1-271ENST00000639823 TIAM1Q13009 1591 aa11.93□□□□□ -0.5
KCNMA1-271ENST00000639823 UGGT2Q9NYU1 1516 aa11.92□□□□□ -0.5
KCNMA1-271ENST00000639823 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
KCNMA1-271ENST00000639823 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
KCNMA1-271ENST00000639823 EFCAB5A4FU69 1503 aa11.89□□□□□ -0.51
KCNMA1-271ENST00000639823 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
KCNMA1-271ENST00000639823 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
KCNMA1-271ENST00000639823 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
KCNMA1-271ENST00000639823 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
KCNMA1-271ENST00000639823 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
KCNMA1-271ENST00000639823 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-271ENST00000639823 PCF11O94913 1555 aaKnown RBP11.86□□□□□ -0.51
KCNMA1-271ENST00000639823 MIER1Q8N108 512 aa11.86□□□□□ -0.51
KCNMA1-271ENST00000639823 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
KCNMA1-271ENST00000639823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
KCNMA1-271ENST00000639823 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
KCNMA1-271ENST00000639823 GCC2Q8IWJ2 1684 aa11.79□□□□□ -0.52
KCNMA1-271ENST00000639823 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-271ENST00000639823 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.53
KCNMA1-271ENST00000639823 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
KCNMA1-271ENST00000639823 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
KCNMA1-271ENST00000639823 ABCA8O94911 1581 aa11.74□□□□□ -0.53
KCNMA1-271ENST00000639823 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-271ENST00000639823 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-271ENST00000639823 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-271ENST00000639823 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
KCNMA1-271ENST00000639823 PLPPR3Q6T4P5 718 aa11.73□□□□□ -0.53
KCNMA1-271ENST00000639823 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
KCNMA1-271ENST00000639823 CASKIN1Q8WXD9 1431 aa11.71□□□□□ -0.54
KCNMA1-271ENST00000639823 NUP153P49790 1475 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-271ENST00000639823 HECW1Q76N89 1606 aa11.69□□□□□ -0.54
KCNMA1-271ENST00000639823 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
KCNMA1-271ENST00000639823 FBLN2P98095 1184 aa11.67□□□□□ -0.54
KCNMA1-271ENST00000639823 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
KCNMA1-271ENST00000639823 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
KCNMA1-271ENST00000639823 ADCY10Q96PN6 1610 aa11.67□□□□□ -0.54
KCNMA1-271ENST00000639823 CDK13Q14004 1512 aaKnown RBP11.66□□□□□ -0.54
KCNMA1-271ENST00000639823 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
KCNMA1-271ENST00000639823 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
KCNMA1-271ENST00000639823 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-271ENST00000639823 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
KCNMA1-271ENST00000639823 EPRSP07814 1512 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-271ENST00000639823 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-271ENST00000639823 ITGAEP38570 1179 aa11.63□□□□□ -0.55
KCNMA1-271ENST00000639823 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
KCNMA1-271ENST00000639823 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
KCNMA1-271ENST00000639823 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
KCNMA1-271ENST00000639823 ZCCHC11Q5TAX3 1644 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-271ENST00000639823 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
KCNMA1-271ENST00000639823 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
KCNMA1-271ENST00000639823 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
KCNMA1-271ENST00000639823 KIF14Q15058 1648 aa11.6□□□□□ -0.55
KCNMA1-271ENST00000639823 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
KCNMA1-271ENST00000639823 ABCC2Q92887 1545 aa11.59□□□□□ -0.55
KCNMA1-271ENST00000639823 SUPT6HQ7KZ85 1726 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-271ENST00000639823 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-271ENST00000639823 DENND4BO75064 1496 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-271ENST00000639823 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
KCNMA1-271ENST00000639823 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
KCNMA1-271ENST00000639823 ATP10BO94823 1461 aa11.57□□□□□ -0.56
KCNMA1-271ENST00000639823 UHRF1BP1LA0JNW5 1464 aa11.56□□□□□ -0.56
KCNMA1-271ENST00000639823 CCDC18Q5T9S5 1454 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms