RNA–Protein interactions for RNA: ENST00000639823.1

KCNMA1-271, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-271ENST00000639823 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
KCNMA1-271ENST00000639823 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
KCNMA1-271ENST00000639823 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.06
KCNMA1-271ENST00000639823 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
KCNMA1-271ENST00000639823 ABCC9O60706 1549 aa14.48□□□□□ -0.09
KCNMA1-271ENST00000639823 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
KCNMA1-271ENST00000639823 NACADO15069 1562 aa14.25□□□□□ -0.13
KCNMA1-271ENST00000639823 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
KCNMA1-271ENST00000639823 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
KCNMA1-271ENST00000639823 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
KCNMA1-271ENST00000639823 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
KCNMA1-271ENST00000639823 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
KCNMA1-271ENST00000639823 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
KCNMA1-271ENST00000639823 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-271ENST00000639823 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
KCNMA1-271ENST00000639823 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
KCNMA1-271ENST00000639823 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
KCNMA1-271ENST00000639823 SMARCA4P51532 1647 aa13.52□□□□□ -0.24
KCNMA1-271ENST00000639823 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-271ENST00000639823 WIZO95785 1651 aa13.49□□□□□ -0.25
KCNMA1-271ENST00000639823 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
KCNMA1-271ENST00000639823 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-271ENST00000639823 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
KCNMA1-271ENST00000639823 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
KCNMA1-271ENST00000639823 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
KCNMA1-271ENST00000639823 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-271ENST00000639823 HRCP23327 699 aa13.23□□□□□ -0.29
KCNMA1-271ENST00000639823 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
KCNMA1-271ENST00000639823 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.3
KCNMA1-271ENST00000639823 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
KCNMA1-271ENST00000639823 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
KCNMA1-271ENST00000639823 HMGXB3Q12766 1538 aa13.17□□□□□ -0.3
KCNMA1-271ENST00000639823 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
KCNMA1-271ENST00000639823 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
KCNMA1-271ENST00000639823 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-271ENST00000639823 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-271ENST00000639823 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-271ENST00000639823 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
KCNMA1-271ENST00000639823 PRDM2Q13029 1718 aa13□□□□□ -0.33
KCNMA1-271ENST00000639823 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
KCNMA1-271ENST00000639823 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
KCNMA1-271ENST00000639823 MYT1Q01538 1121 aa12.87□□□□□ -0.35
KCNMA1-271ENST00000639823 CFTRP13569 1480 aa12.83□□□□□ -0.36
KCNMA1-271ENST00000639823 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
KCNMA1-271ENST00000639823 NESP48681 1621 aa12.79□□□□□ -0.36
KCNMA1-271ENST00000639823 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-271ENST00000639823 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
KCNMA1-271ENST00000639823 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
KCNMA1-271ENST00000639823 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
KCNMA1-271ENST00000639823 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
KCNMA1-271ENST00000639823 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
KCNMA1-271ENST00000639823 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.38
KCNMA1-271ENST00000639823 CUX1P39880 1505 aa12.67□□□□□ -0.38
KCNMA1-271ENST00000639823 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
KCNMA1-271ENST00000639823 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
KCNMA1-271ENST00000639823 KIF21BO75037 1637 aa12.66□□□□□ -0.38
KCNMA1-271ENST00000639823 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
KCNMA1-271ENST00000639823 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
KCNMA1-271ENST00000639823 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
KCNMA1-271ENST00000639823 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
KCNMA1-271ENST00000639823 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
KCNMA1-271ENST00000639823 URB2Q14146 1524 aaKnown RBP12.58□□□□□ -0.4
KCNMA1-271ENST00000639823 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
KCNMA1-271ENST00000639823 EEA1Q15075 1411 aa12.54□□□□□ -0.4
KCNMA1-271ENST00000639823 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
KCNMA1-271ENST00000639823 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
KCNMA1-271ENST00000639823 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
KCNMA1-271ENST00000639823 WDR62O43379 1518 aa12.49□□□□□ -0.41
KCNMA1-271ENST00000639823 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-271ENST00000639823 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-271ENST00000639823 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-271ENST00000639823 SOGA1O94964 1423 aa12.47□□□□□ -0.41
KCNMA1-271ENST00000639823 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
KCNMA1-271ENST00000639823 PDS5BQ9NTI5 1447 aa12.46□□□□□ -0.42
KCNMA1-271ENST00000639823 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-271ENST00000639823 CUX2O14529 1486 aa12.43□□□□□ -0.42
KCNMA1-271ENST00000639823 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
KCNMA1-271ENST00000639823 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
KCNMA1-271ENST00000639823 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
KCNMA1-271ENST00000639823 RAD54L2Q9Y4B4 1467 aa12.39□□□□□ -0.43
KCNMA1-271ENST00000639823 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
KCNMA1-271ENST00000639823 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
KCNMA1-271ENST00000639823 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-271ENST00000639823 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
KCNMA1-271ENST00000639823 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
KCNMA1-271ENST00000639823 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
KCNMA1-271ENST00000639823 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-271ENST00000639823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
KCNMA1-271ENST00000639823 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-271ENST00000639823 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
KCNMA1-271ENST00000639823 ZNF608Q9ULD9 1512 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-271ENST00000639823 PRXQ9BXM0 1461 aa12.27□□□□□ -0.45
KCNMA1-271ENST00000639823 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
KCNMA1-271ENST00000639823 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
KCNMA1-271ENST00000639823 CUL7Q14999 1698 aa12.22□□□□□ -0.45
KCNMA1-271ENST00000639823 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
KCNMA1-271ENST00000639823 IGF1RP08069 1367 aa12.22□□□□□ -0.45
KCNMA1-271ENST00000639823 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
KCNMA1-271ENST00000639823 MAP3K1Q13233 1512 aa12.21□□□□□ -0.46
KCNMA1-271ENST00000639823 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms