RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 KIAA0586Q9BVV6 1533 aa30.43■■■□□ 2.46
SPIN3-220ENST00000639257 JPH4Q96JJ6 628 aa30.36■■■□□ 2.45
SPIN3-220ENST00000639257 RAPGEF2Q9Y4G8 1499 aa30.35■■■□□ 2.45
SPIN3-220ENST00000639257 PRG4Q92954 1404 aaPredicted RBP30.33■■■□□ 2.45
SPIN3-220ENST00000639257 PRXQ9BXM0 1461 aa30.3■■■□□ 2.44
SPIN3-220ENST00000639257 IQGAP2Q13576 1575 aa30.21■■■□□ 2.43
SPIN3-220ENST00000639257 EEA1Q15075 1411 aa30.2■■■□□ 2.42
SPIN3-220ENST00000639257 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
SPIN3-220ENST00000639257 UGGT2Q9NYU1 1516 aa30.11■■■□□ 2.41
SPIN3-220ENST00000639257 CSRNP3Q8WYN3 585 aa30.1■■■□□ 2.41
SPIN3-220ENST00000639257 CTTNBP2Q8WZ74 1663 aa30.07■■■□□ 2.4
SPIN3-220ENST00000639257 DISP1Q96F81 1524 aa30.06■■■□□ 2.4
SPIN3-220ENST00000639257 CARMIL2Q6F5E8 1435 aa30.03■■■□□ 2.4
SPIN3-220ENST00000639257 TNIKQ9UKE5 1360 aa29.97■■■□□ 2.39
SPIN3-220ENST00000639257 KIAA0556O60303 1618 aa29.95■■■□□ 2.38
SPIN3-220ENST00000639257 ADCY10Q96PN6 1610 aa29.94■■■□□ 2.38
SPIN3-220ENST00000639257 PTPRGP23470 1445 aa29.94■■■□□ 2.38
SPIN3-220ENST00000639257 KIF21BO75037 1637 aa29.91■■■□□ 2.38
SPIN3-220ENST00000639257 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
SPIN3-220ENST00000639257 UHRF1BP1LA0JNW5 1464 aa29.83■■■□□ 2.37
SPIN3-220ENST00000639257 MAPKBP1O60336 1514 aa29.82■■■□□ 2.36
SPIN3-220ENST00000639257 FAM9AQ8IZU1 332 aaPredicted RBP29.81■■■□□ 2.36
SPIN3-220ENST00000639257 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
SPIN3-220ENST00000639257 UACAQ9BZF9 1416 aa29.77■■■□□ 2.36
SPIN3-220ENST00000639257 ABCC2Q92887 1545 aa29.76■■■□□ 2.35
SPIN3-220ENST00000639257 SAMD9Q5K651 1589 aa29.75■■■□□ 2.35
SPIN3-220ENST00000639257 KDM5BQ9UGL1 1544 aa29.68■■■□□ 2.34
SPIN3-220ENST00000639257 NPM1P06748 294 aaKnown RBP eCLIP29.68■■■□□ 2.34
SPIN3-220ENST00000639257 KIF13AQ9H1H9 1805 aa29.67■■■□□ 2.34
SPIN3-220ENST00000639257 ABCC10Q5T3U5 1492 aa29.67■■■□□ 2.34
SPIN3-220ENST00000639257 ABCA8O94911 1581 aa29.66■■■□□ 2.34
SPIN3-220ENST00000639257 TTBK1Q5TCY1 1321 aaPredicted RBP29.65■■■□□ 2.34
SPIN3-220ENST00000639257 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
SPIN3-220ENST00000639257 DIP2BQ9P265 1576 aa29.62■■■□□ 2.33
SPIN3-220ENST00000639257 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
SPIN3-220ENST00000639257 ZCCHC11Q5TAX3 1644 aaKnown RBP29.55■■■□□ 2.32
SPIN3-220ENST00000639257 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
SPIN3-220ENST00000639257 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
SPIN3-220ENST00000639257 FAM69CQ0P6D2 419 aa29.47■■■□□ 2.31
SPIN3-220ENST00000639257 GLI2P10070 1586 aa29.47■■■□□ 2.31
SPIN3-220ENST00000639257 FHOD3Q2V2M9 1422 aa29.45■■■□□ 2.31
SPIN3-220ENST00000639257 UBTFP17480 764 aaKnown RBP29.45■■■□□ 2.31
SPIN3-220ENST00000639257 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
SPIN3-220ENST00000639257 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
SPIN3-220ENST00000639257 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
SPIN3-220ENST00000639257 WDR7Q9Y4E6 1490 aa29.39■■■□□ 2.3
SPIN3-220ENST00000639257 ATP10BO94823 1461 aa29.37■■■□□ 2.29
SPIN3-220ENST00000639257 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
SPIN3-220ENST00000639257 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
SPIN3-220ENST00000639257 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
SPIN3-220ENST00000639257 MAP3K4Q9Y6R4 1608 aa29.3■■■□□ 2.28
SPIN3-220ENST00000639257 PPRC1Q5VV67 1664 aaKnown RBP29.29■■■□□ 2.28
SPIN3-220ENST00000639257 FMN1Q68DA7 1419 aa29.24■■■□□ 2.27
SPIN3-220ENST00000639257 TSPOAP1O95153 1857 aa29.22■■■□□ 2.27
SPIN3-220ENST00000639257 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
SPIN3-220ENST00000639257 ARID3CA6NKF2 412 aa29.15■■■□□ 2.26
SPIN3-220ENST00000639257 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
SPIN3-220ENST00000639257 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
SPIN3-220ENST00000639257 ABCA9Q8IUA7 1624 aa29.11■■■□□ 2.25
SPIN3-220ENST00000639257 CLIP1P30622 1438 aa29.11■■■□□ 2.25
SPIN3-220ENST00000639257 TEX14Q8IWB6 1497 aa29.1■■■□□ 2.25
SPIN3-220ENST00000639257 KDM6BO15054 1643 aa29.1■■■□□ 2.25
SPIN3-220ENST00000639257 CD109Q6YHK3 1445 aa29.09■■■□□ 2.25
SPIN3-220ENST00000639257 KCNH8Q96L42 1107 aa29.08■■■□□ 2.25
SPIN3-220ENST00000639257 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
SPIN3-220ENST00000639257 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
SPIN3-220ENST00000639257 COL17A1Q9UMD9 1497 aaPredicted RBP29.02■■■□□ 2.24
SPIN3-220ENST00000639257 LRRIQ1Q96JM4 1722 aa29.01■■■□□ 2.23
SPIN3-220ENST00000639257 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.23
SPIN3-220ENST00000639257 PLEKHD1A6NEE1 506 aa29■■■□□ 2.23
SPIN3-220ENST00000639257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29■■■□□ 2.23
SPIN3-220ENST00000639257 HNRNPUL2Q1KMD3 747 aaKnown RBP29■■■□□ 2.23
SPIN3-220ENST00000639257 CEP162Q5TB80 1403 aa28.95■■■□□ 2.23
SPIN3-220ENST00000639257 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
SPIN3-220ENST00000639257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.94■■■□□ 2.22
SPIN3-220ENST00000639257 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
SPIN3-220ENST00000639257 ARAP3Q8WWN8 1544 aa28.89■■■□□ 2.21
SPIN3-220ENST00000639257 PHLDB1Q86UU1 1377 aa28.88■■■□□ 2.21
SPIN3-220ENST00000639257 TTC37Q6PGP7 1564 aa28.88■■■□□ 2.21
SPIN3-220ENST00000639257 NEO1Q92859 1461 aa28.87■■■□□ 2.21
SPIN3-220ENST00000639257 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
SPIN3-220ENST00000639257 LOC105371045A0A1W2PR82 267 aa28.86■■■□□ 2.21
SPIN3-220ENST00000639257 ATP1B4Q9UN42 357 aaPredicted RBP28.85■■■□□ 2.21
SPIN3-220ENST00000639257 CDK11AQ9UQ88 783 aaPredicted RBP28.85■■■□□ 2.21
SPIN3-220ENST00000639257 KIF14Q15058 1648 aa28.8■■■□□ 2.2
SPIN3-220ENST00000639257 PLCH2O75038 1416 aa28.77■■■□□ 2.2
SPIN3-220ENST00000639257 CFAP74Q9C0B2 1584 aa28.74■■■□□ 2.19
SPIN3-220ENST00000639257 FANCAO15360 1455 aa28.73■■■□□ 2.19
SPIN3-220ENST00000639257 MYO5CQ9NQX4 1742 aa28.7■■■□□ 2.19
SPIN3-220ENST00000639257 FRMPD1Q5SYB0 1578 aa28.7■■■□□ 2.18
SPIN3-220ENST00000639257 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
SPIN3-220ENST00000639257 VPS8Q8N3P4 1428 aa28.64■■■□□ 2.18
SPIN3-220ENST00000639257 RICTORQ6R327 1708 aa28.63■■■□□ 2.17
SPIN3-220ENST00000639257 DENND4BO75064 1496 aaPredicted RBP28.61■■■□□ 2.17
SPIN3-220ENST00000639257 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
SPIN3-220ENST00000639257 RAPGEF3O95398 923 aa28.59■■■□□ 2.17
SPIN3-220ENST00000639257 CDC42BPBQ9Y5S2 1711 aa28.59■■■□□ 2.17
SPIN3-220ENST00000639257 EFCAB2Q5VUJ9 269 aa28.57■■■□□ 2.16
SPIN3-220ENST00000639257 ADGRL1O94910 1474 aa28.57■■■□□ 2.16
SPIN3-220ENST00000639257 ZMYM4Q5VZL5 1548 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms