RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
SPIN3-220ENST00000639257 CCDC180Q9P1Z9 1646 aa39.17■■■■□ 3.86
SPIN3-220ENST00000639257 ABCC9O60706 1549 aa38.28■■■■□ 3.72
SPIN3-220ENST00000639257 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
SPIN3-220ENST00000639257 NACADO15069 1562 aa36.83■■■■□ 3.49
SPIN3-220ENST00000639257 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
SPIN3-220ENST00000639257 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
SPIN3-220ENST00000639257 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
SPIN3-220ENST00000639257 DCAF8L2P0C7V8 631 aa36.46■■■■□ 3.43
SPIN3-220ENST00000639257 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
SPIN3-220ENST00000639257 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.32
SPIN3-220ENST00000639257 PABPN1Q86U42 306 aaKnown RBP eCLIP35.7■■■■□ 3.31
SPIN3-220ENST00000639257 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
SPIN3-220ENST00000639257 SHROOM4Q9ULL8 1493 aa35.49■■■■□ 3.27
SPIN3-220ENST00000639257 DNAJC5BQ9UF47 199 aa35.3■■■■□ 3.24
SPIN3-220ENST00000639257 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
SPIN3-220ENST00000639257 CC2D2AQ9P2K1 1620 aa34.69■■■■□ 3.14
SPIN3-220ENST00000639257 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
SPIN3-220ENST00000639257 SMARCA4P51532 1647 aa34.12■■■■□ 3.05
SPIN3-220ENST00000639257 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
SPIN3-220ENST00000639257 NCAPD3P42695 1498 aa34.01■■■■□ 3.04
SPIN3-220ENST00000639257 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
SPIN3-220ENST00000639257 SMARCA2P51531 1590 aa33.92■■■■□ 3.02
SPIN3-220ENST00000639257 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
SPIN3-220ENST00000639257 MROH2BQ7Z745 1585 aa33.86■■■■□ 3.01
SPIN3-220ENST00000639257 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
SPIN3-220ENST00000639257 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SPIN3-220ENST00000639257 WIZO95785 1651 aa33.45■■■□□ 2.95
SPIN3-220ENST00000639257 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.94
SPIN3-220ENST00000639257 TOP2AP11388 1531 aaKnown RBP33.14■■■□□ 2.9
SPIN3-220ENST00000639257 NESP48681 1621 aa33.13■■■□□ 2.89
SPIN3-220ENST00000639257 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
SPIN3-220ENST00000639257 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
SPIN3-220ENST00000639257 CADPSQ9ULU8 1353 aa32.96■■■□□ 2.87
SPIN3-220ENST00000639257 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
SPIN3-220ENST00000639257 CUX2O14529 1486 aa32.8■■■□□ 2.84
SPIN3-220ENST00000639257 CFTRP13569 1480 aa32.79■■■□□ 2.84
SPIN3-220ENST00000639257 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
SPIN3-220ENST00000639257 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
SPIN3-220ENST00000639257 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
SPIN3-220ENST00000639257 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
SPIN3-220ENST00000639257 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.79
SPIN3-220ENST00000639257 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
SPIN3-220ENST00000639257 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
SPIN3-220ENST00000639257 WDR62O43379 1518 aa32.47■■■□□ 2.79
SPIN3-220ENST00000639257 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
SPIN3-220ENST00000639257 URB2Q14146 1524 aaKnown RBP32.27■■■□□ 2.76
SPIN3-220ENST00000639257 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
SPIN3-220ENST00000639257 ABCC8Q09428 1581 aa32.04■■■□□ 2.72
SPIN3-220ENST00000639257 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
SPIN3-220ENST00000639257 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
SPIN3-220ENST00000639257 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
SPIN3-220ENST00000639257 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
SPIN3-220ENST00000639257 CUX1P39880 1505 aa31.77■■■□□ 2.68
SPIN3-220ENST00000639257 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
SPIN3-220ENST00000639257 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
SPIN3-220ENST00000639257 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
SPIN3-220ENST00000639257 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
SPIN3-220ENST00000639257 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
SPIN3-220ENST00000639257 SOGA1O94964 1423 aa31.58■■■□□ 2.65
SPIN3-220ENST00000639257 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
SPIN3-220ENST00000639257 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
SPIN3-220ENST00000639257 AQRO60306 1485 aaKnown RBP eCLIP31.49■■■□□ 2.63
SPIN3-220ENST00000639257 WRNQ14191 1432 aaPredicted RBP eCLIP31.49■■■□□ 2.63
SPIN3-220ENST00000639257 TOP2BQ02880 1626 aa31.48■■■□□ 2.63
SPIN3-220ENST00000639257 SYNJ1O43426 1573 aa31.44■■■□□ 2.62
SPIN3-220ENST00000639257 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
SPIN3-220ENST00000639257 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
SPIN3-220ENST00000639257 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
SPIN3-220ENST00000639257 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
SPIN3-220ENST00000639257 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
SPIN3-220ENST00000639257 GAPVD1Q14C86 1478 aa31.23■■■□□ 2.59
SPIN3-220ENST00000639257 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
SPIN3-220ENST00000639257 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
SPIN3-220ENST00000639257 CHD1O14646 1710 aa31.18■■■□□ 2.58
SPIN3-220ENST00000639257 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
SPIN3-220ENST00000639257 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
SPIN3-220ENST00000639257 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
SPIN3-220ENST00000639257 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
SPIN3-220ENST00000639257 FBLN2P98095 1184 aa30.97■■■□□ 2.55
SPIN3-220ENST00000639257 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
SPIN3-220ENST00000639257 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
SPIN3-220ENST00000639257 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
SPIN3-220ENST00000639257 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 KIF27Q86VH2 1401 aa30.82■■■□□ 2.52
SPIN3-220ENST00000639257 NUP160Q12769 1436 aa30.8■■■□□ 2.52
SPIN3-220ENST00000639257 IGF1RP08069 1367 aa30.76■■■□□ 2.51
SPIN3-220ENST00000639257 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
SPIN3-220ENST00000639257 CUL7Q14999 1698 aa30.68■■■□□ 2.5
SPIN3-220ENST00000639257 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
SPIN3-220ENST00000639257 SHROOM2Q13796 1616 aa30.59■■■□□ 2.49
SPIN3-220ENST00000639257 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
SPIN3-220ENST00000639257 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
SPIN3-220ENST00000639257 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
SPIN3-220ENST00000639257 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
SPIN3-220ENST00000639257 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms