RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SHROOM2Q13796 1616 aa36.73■■■■□ 3.47
SCN1B-206ENST00000638536 RAPGEF2Q9Y4G8 1499 aa36.66■■■■□ 3.46
SCN1B-206ENST00000638536 JPH4Q96JJ6 628 aa36.64■■■■□ 3.46
SCN1B-206ENST00000638536 KIAA0586Q9BVV6 1533 aa36.62■■■■□ 3.45
SCN1B-206ENST00000638536 PRXQ9BXM0 1461 aa36.57■■■■□ 3.44
SCN1B-206ENST00000638536 PRG4Q92954 1404 aaPredicted RBP36.57■■■■□ 3.44
SCN1B-206ENST00000638536 CSRNP3Q8WYN3 585 aa36.54■■■■□ 3.44
SCN1B-206ENST00000638536 FAM9AQ8IZU1 332 aaPredicted RBP36.53■■■■□ 3.44
SCN1B-206ENST00000638536 EEA1Q15075 1411 aa36.46■■■■□ 3.43
SCN1B-206ENST00000638536 IQGAP2Q13576 1575 aa36.43■■■■□ 3.42
SCN1B-206ENST00000638536 CTTNBP2Q8WZ74 1663 aa36.35■■■■□ 3.41
SCN1B-206ENST00000638536 DISP1Q96F81 1524 aa36.24■■■■□ 3.39
SCN1B-206ENST00000638536 UGGT2Q9NYU1 1516 aa36.24■■■■□ 3.39
SCN1B-206ENST00000638536 CARMIL2Q6F5E8 1435 aa36.18■■■■□ 3.38
SCN1B-206ENST00000638536 KIF21BO75037 1637 aa36.17■■■■□ 3.38
SCN1B-206ENST00000638536 TTBK1Q5TCY1 1321 aaPredicted RBP36.16■■■■□ 3.38
SCN1B-206ENST00000638536 EHMT2Q96KQ7 1210 aa36.12■■■■□ 3.37
SCN1B-206ENST00000638536 TNIKQ9UKE5 1360 aa36.12■■■■□ 3.37
SCN1B-206ENST00000638536 KIAA0556O60303 1618 aa36.11■■■■□ 3.37
SCN1B-206ENST00000638536 PTPRGP23470 1445 aa36.11■■■■□ 3.37
SCN1B-206ENST00000638536 ADCY10Q96PN6 1610 aa36.04■■■■□ 3.36
SCN1B-206ENST00000638536 GOLGA3Q08378 1498 aa35.96■■■■□ 3.35
SCN1B-206ENST00000638536 TRHP20396 242 aaPredicted RBP35.95■■■■□ 3.35
SCN1B-206ENST00000638536 RANGAP1P46060 587 aaPredicted RBP35.94■■■■□ 3.34
SCN1B-206ENST00000638536 P3H3Q8IVL6 736 aa35.93■■■■□ 3.34
SCN1B-206ENST00000638536 UBTFP17480 764 aaKnown RBP35.9■■■■□ 3.34
SCN1B-206ENST00000638536 SAMD9Q5K651 1589 aa35.88■■■■□ 3.33
SCN1B-206ENST00000638536 UACAQ9BZF9 1416 aa35.86■■■■□ 3.33
SCN1B-206ENST00000638536 NPM1P06748 294 aaKnown RBP eCLIP35.81■■■■□ 3.32
SCN1B-206ENST00000638536 UHRF1BP1LA0JNW5 1464 aa35.8■■■■□ 3.32
SCN1B-206ENST00000638536 PLB1Q6P1J6 1458 aa35.8■■■■□ 3.32
SCN1B-206ENST00000638536 ABCC2Q92887 1545 aa35.8■■■■□ 3.32
SCN1B-206ENST00000638536 MAPKBP1O60336 1514 aa35.73■■■■□ 3.31
SCN1B-206ENST00000638536 ABCA8O94911 1581 aa35.73■■■■□ 3.31
SCN1B-206ENST00000638536 FHOD3Q2V2M9 1422 aa35.71■■■■□ 3.31
SCN1B-206ENST00000638536 KIF13AQ9H1H9 1805 aa35.69■■■■□ 3.3
SCN1B-206ENST00000638536 KDM5BQ9UGL1 1544 aa35.67■■■■□ 3.3
SCN1B-206ENST00000638536 EFCAB5A4FU69 1503 aa35.64■■■■□ 3.3
SCN1B-206ENST00000638536 ZCCHC11Q5TAX3 1644 aaKnown RBP35.64■■■■□ 3.3
SCN1B-206ENST00000638536 ABCC10Q5T3U5 1492 aa35.59■■■■□ 3.29
SCN1B-206ENST00000638536 ARHGAP35Q9NRY4 1499 aa35.59■■■■□ 3.29
SCN1B-206ENST00000638536 ASXL2Q76L83 1435 aa35.58■■■■□ 3.29
SCN1B-206ENST00000638536 DIP2BQ9P265 1576 aa35.56■■■■□ 3.28
SCN1B-206ENST00000638536 FAM69CQ0P6D2 419 aa35.55■■■■□ 3.28
SCN1B-206ENST00000638536 ARID3CA6NKF2 412 aa35.54■■■■□ 3.28
SCN1B-206ENST00000638536 RAPGEF6Q8TEU7 1601 aa35.53■■■■□ 3.28
SCN1B-206ENST00000638536 ATP10BO94823 1461 aa35.45■■■■□ 3.27
SCN1B-206ENST00000638536 NUP153P49790 1475 aaKnown RBP35.43■■■■□ 3.26
SCN1B-206ENST00000638536 LOC105371045A0A1W2PR82 267 aa35.43■■■■□ 3.26
SCN1B-206ENST00000638536 TSPOAP1O95153 1857 aa35.37■■■■□ 3.25
SCN1B-206ENST00000638536 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
SCN1B-206ENST00000638536 WDR7Q9Y4E6 1490 aa35.37■■■■□ 3.25
SCN1B-206ENST00000638536 CLIP1P30622 1438 aa35.33■■■■□ 3.25
SCN1B-206ENST00000638536 GLI2P10070 1586 aa35.32■■■■□ 3.24
SCN1B-206ENST00000638536 FMN1Q68DA7 1419 aa35.31■■■■□ 3.24
SCN1B-206ENST00000638536 KCNH8Q96L42 1107 aa35.28■■■■□ 3.24
SCN1B-206ENST00000638536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.27■■■■□ 3.24
SCN1B-206ENST00000638536 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
SCN1B-206ENST00000638536 ATP1B4Q9UN42 357 aaPredicted RBP35.23■■■■□ 3.23
SCN1B-206ENST00000638536 PPRC1Q5VV67 1664 aaKnown RBP35.23■■■■□ 3.23
SCN1B-206ENST00000638536 CDK13Q14004 1512 aaKnown RBP35.22■■■■□ 3.23
SCN1B-206ENST00000638536 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
SCN1B-206ENST00000638536 CEP162Q5TB80 1403 aa35.19■■■■□ 3.22
SCN1B-206ENST00000638536 LRRIQ1Q96JM4 1722 aa35.18■■■■□ 3.22
SCN1B-206ENST00000638536 HECW1Q76N89 1606 aa35.17■■■■□ 3.22
SCN1B-206ENST00000638536 PCF11O94913 1555 aaKnown RBP35.14■■■■□ 3.22
SCN1B-206ENST00000638536 CASKIN1Q8WXD9 1431 aa35.09■■■■□ 3.21
SCN1B-206ENST00000638536 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
SCN1B-206ENST00000638536 CFAP43Q8NDM7 1665 aa35.08■■■■□ 3.21
SCN1B-206ENST00000638536 CD109Q6YHK3 1445 aa35.05■■■■□ 3.2
SCN1B-206ENST00000638536 ABCA9Q8IUA7 1624 aa35.02■■■■□ 3.2
SCN1B-206ENST00000638536 FYCO1Q9BQS8 1478 aa34.98■■■■□ 3.19
SCN1B-206ENST00000638536 KDM6BO15054 1643 aa34.97■■■■□ 3.19
SCN1B-206ENST00000638536 MAGI3Q5TCQ9 1506 aa34.96■■■■□ 3.19
SCN1B-206ENST00000638536 TEX14Q8IWB6 1497 aa34.94■■■■□ 3.18
SCN1B-206ENST00000638536 COL17A1Q9UMD9 1497 aaPredicted RBP34.92■■■■□ 3.18
SCN1B-206ENST00000638536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.92■■■■□ 3.18
SCN1B-206ENST00000638536 CCDC18Q5T9S5 1454 aa34.89■■■■□ 3.18
SCN1B-206ENST00000638536 TTC37Q6PGP7 1564 aa34.88■■■■□ 3.17
SCN1B-206ENST00000638536 CDK11AQ9UQ88 783 aaPredicted RBP34.87■■■■□ 3.17
SCN1B-206ENST00000638536 KIF14Q15058 1648 aa34.86■■■■□ 3.17
SCN1B-206ENST00000638536 TROQ12816 1431 aaPredicted RBP34.84■■■■□ 3.17
SCN1B-206ENST00000638536 VPS8Q8N3P4 1428 aa34.74■■■■□ 3.15
SCN1B-206ENST00000638536 NEO1Q92859 1461 aa34.68■■■■□ 3.14
SCN1B-206ENST00000638536 MYO5CQ9NQX4 1742 aa34.67■■■■□ 3.14
SCN1B-206ENST00000638536 PLCH2O75038 1416 aa34.67■■■■□ 3.14
SCN1B-206ENST00000638536 ARAP3Q8WWN8 1544 aa34.66■■■■□ 3.14
SCN1B-206ENST00000638536 FANCAO15360 1455 aa34.66■■■■□ 3.14
SCN1B-206ENST00000638536 AKNAQ7Z591 1439 aa34.6■■■■□ 3.13
SCN1B-206ENST00000638536 PHLDB1Q86UU1 1377 aa34.6■■■■□ 3.13
SCN1B-206ENST00000638536 RAPGEF3O95398 923 aa34.59■■■■□ 3.13
SCN1B-206ENST00000638536 CDC42BPBQ9Y5S2 1711 aa34.58■■■■□ 3.13
SCN1B-206ENST00000638536 MTUS2Q5JR59 1369 aa34.58■■■■□ 3.13
SCN1B-206ENST00000638536 CFAP74Q9C0B2 1584 aa34.56■■■■□ 3.12
SCN1B-206ENST00000638536 TIAM1Q13009 1591 aa34.55■■■■□ 3.12
SCN1B-206ENST00000638536 CDC42BPAQ5VT25 1732 aa34.55■■■■□ 3.12
SCN1B-206ENST00000638536 FRMPD1Q5SYB0 1578 aa34.53■■■■□ 3.12
SCN1B-206ENST00000638536 PREX2Q70Z35 1606 aa34.51■■■■□ 3.12
SCN1B-206ENST00000638536 ARHGAP5Q13017 1502 aa34.51■■■■□ 3.12
SCN1B-206ENST00000638536 EFCAB2Q5VUJ9 269 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms